| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_09240 | | Holliday junction branch migration DNA helicase RuvB | 1.0 | CSW01_11775 | | exodeoxyribonuclease V subunit alpha | 0.69 | 15 |
| Erwinia amylovora T8 | 0.81 | OLJFJH_12860 | | Holliday junction branch migration DNA helicase RuvB | 0.35 | OLJFJH_09105 | | exodeoxyribonuclease V subunit alpha | — | — |
| Erwinia tracheiphila HP pepo 2.2 | 0.81 | IJEDHG_22140 | ruvB | Holliday junction branch migration DNA helicase RuvB | 0.34 | IJEDHG_17210 | recD | exodeoxyribonuclease V subunit alpha | — | — |
| Erwinia tracheiphila SCR3 | 0.81 | LU632_RS13410 | ruvB | Holliday junction branch migration DNA helicase RuvB | 0.34 | LU632_RS06195 | recD | exodeoxyribonuclease V subunit alpha | — | — |
| Pectobacterium carotovorum WPP14 | 0.81 | HER17_RS11840 | | Holliday junction branch migration DNA helicase RuvB | 0.35 | HER17_RS16520 | | exodeoxyribonuclease V subunit alpha | 0.63 | 16 |
| Serratia liquefaciens MT49 | 0.81 | IAI46_14620 | | Holliday junction branch migration DNA helicase RuvB | 0.36 | IAI46_20400 | | exodeoxyribonuclease V subunit alpha | — | — |
| Klebsiella michiganensis M5al | 0.80 | BWI76_RS18145 | | Holliday junction branch migration DNA helicase RuvB | 0.33 | BWI76_RS23225 | | exonuclease V subunit alpha | — | — |
| Klebsiella pneumoniae MRSN742743 | 0.80 | GJGHJB_01799 | ruvB | Holliday junction branch migration DNA helicase RuvB | 0.32 | GJGHJB_00881 | recD | exodeoxyribonuclease V subunit alpha | — | — |
| Klebsiella pneumoniae MKP103 | 0.80 | KDGMDA_25410 | | Holliday junction branch migration DNA helicase RuvB | 0.32 | KDGMDA_03805 | | exodeoxyribonuclease V subunit alpha | low | > 94 |
| Enterobacter sp. TBS_079 | 0.80 | MPMX20_02766 | | Holliday junction ATP-dependent DNA helicase RuvB | 0.35 | MPMX20_03682 | | RecBCD enzyme subunit RecD | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.79 | GFF1639 | | Holliday junction DNA helicase RuvB | 0.33 | GFF1300 | | Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) | — | — |
| Enterobacter asburiae PDN3 | 0.79 | EX28DRAFT_0696 | | Holliday junction DNA helicase subunit RuvB | 0.36 | EX28DRAFT_2894 | | DNA helicase/exodeoxyribonuclease V, alpha subunit (EC 3.1.11.5) | — | — |
| Escherichia coli BW25113 | 0.79 | b1860 | ruvB | Holliday junction DNA helicase B (NCBI) | 0.35 | b2819 | recD | exonuclease V (RecBCD complex), alpha chain (NCBI) | low | > 76 |
| Escherichia coli ECRC100 | 0.79 | OKFHMN_26285 | ruvB | Holliday junction branch migration DNA helicase RuvB | 0.35 | OKFHMN_20055 | recD | exodeoxyribonuclease V subunit alpha | — | — |
| Escherichia fergusonii Becca | 0.79 | EFB2_02082 | | Holliday junction ATP-dependent DNA helicase RuvB | 0.35 | EFB2_01065 | | RecBCD enzyme subunit RecD | — | — |
| Escherichia coli ECRC98 | 0.79 | JDDGAC_00860 | ruvB | Holliday junction branch migration DNA helicase RuvB | 0.35 | JDDGAC_23720 | recD | exodeoxyribonuclease V subunit alpha | — | — |
| Escherichia coli ECRC102 | 0.79 | NIAGMN_01775 | ruvB | Holliday junction branch migration DNA helicase RuvB | 0.35 | NIAGMN_17825 | recD | exodeoxyribonuclease V subunit alpha | — | — |
| Escherichia coli ECRC62 | 0.79 | BNILDI_15520 | ruvB | Holliday junction branch migration DNA helicase RuvB | 0.35 | BNILDI_10420 | recD | exodeoxyribonuclease V subunit alpha | low | > 75 |
| Escherichia coli ECOR27 | 0.79 | NOLOHH_16730 | ruvB | Holliday junction branch migration DNA helicase RuvB | 0.35 | NOLOHH_11940 | recD | exodeoxyribonuclease V subunit alpha | — | — |
| Escherichia coli BL21 | 0.79 | ECD_01831 | | ATP-dependent DNA helicase, component of RuvABC resolvasome | 0.35 | ECD_02667 | | exonuclease V (RecBCD complex), alpha chain | — | — |
| Escherichia coli ECRC101 | 0.79 | MCAODC_19120 | ruvB | Holliday junction branch migration DNA helicase RuvB | 0.35 | MCAODC_10580 | recD | exodeoxyribonuclease V subunit alpha | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.79 | OHPLBJKB_01868 | | Holliday junction ATP-dependent DNA helicase RuvB | 0.35 | OHPLBJKB_00911 | | RecBCD enzyme subunit RecD | — | — |
| Escherichia coli ECRC99 | 0.79 | KEDOAH_01820 | ruvB | Holliday junction branch migration DNA helicase RuvB | 0.35 | KEDOAH_08075 | recD | exodeoxyribonuclease V subunit alpha | — | — |
| Escherichia coli Nissle 1917 | 0.79 | ECOLIN_RS10360 | | Holliday junction branch migration DNA helicase RuvB | 0.35 | ECOLIN_RS15825 | | exodeoxyribonuclease V subunit alpha | — | — |
| Escherichia coli ECOR38 | 0.79 | HEPCGN_04695 | ruvB | Holliday junction branch migration DNA helicase RuvB | 0.35 | HEPCGN_19310 | recD | exodeoxyribonuclease V subunit alpha | 0.73 | 7 |
| Shewanella sp. ANA-3 | 0.77 | Shewana3_1957 | ruvB | Holliday junction DNA helicase RuvB (RefSeq) | 0.27 | Shewana3_2247 | | exodeoxyribonuclease V, alpha subunit (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.77 | SO2429 | ruvB | Holliday junction DNA helicase RuvB (NCBI ptt file) | 0.27 | SO2147 | recD | exodeoxyribonuclease V, alpha subunit (NCBI ptt file) | 0.37 | 17 |
| Shewanella amazonensis SB2B | 0.76 | Sama_1839 | ruvB | Holliday junction DNA helicase RuvB (RefSeq) | 0.25 | Sama_1902 | | exodeoxyribonuclease V (RefSeq) | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.75 | Psyr_1410 | | Holliday junction DNA helicase RuvB | 0.27 | Psyr_0682 | | DNA helicase/exodeoxyribonuclease V, alpha subunit | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.75 | Psyr_1410 | | Holliday junction DNA helicase RuvB | 0.27 | Psyr_0682 | | DNA helicase/exodeoxyribonuclease V, alpha subunit | — | — |
| Pseudomonas sp. DMC3 | 0.75 | GFF5184 | | Holliday junction ATP-dependent DNA helicase RuvB | 0.27 | GFF4914 | | RecBCD enzyme subunit RecD | low | > 89 |
| Pseudomonas lactucae CFBP13502 | 0.75 | GEMAOFIL_04641 | | Holliday junction ATP-dependent DNA helicase RuvB | 0.27 | GEMAOFIL_04900 | | RecBCD enzyme subunit RecD | low | > 96 |
| Pseudomonas fluorescens GW456-L13 | 0.75 | PfGW456L13_1853 | | Holliday junction DNA helicase RuvB | 0.27 | PfGW456L13_5150 | | Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) | low | > 87 |
| Pseudomonas protegens RBAN4 | 0.75 | FABNJH_24090 | ruvB | Holliday junction branch migration DNA helicase RuvB | 0.26 | FABNJH_03840 | recD | exodeoxyribonuclease V subunit alpha | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.75 | PFLU_RS24085 | | Holliday junction branch migration DNA helicase RuvB | 0.27 | PFLU_RS25585 | | exodeoxyribonuclease V subunit alpha | 0.32 | 55 |
| Pseudomonas fluorescens FW300-N2E3 | 0.75 | AO353_03580 | | ATP-dependent DNA helicase RuvB | 0.27 | AO353_06040 | | exodeoxyribonuclease V subunit alpha | 0.59 | 2 |
| Pseudomonas fluorescens FW300-N1B4 | 0.75 | Pf1N1B4_637 | | Holliday junction DNA helicase RuvB | 0.26 | Pf1N1B4_1234 | | Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) | — | — |
| Pseudomonas fluorescens SBW25 | 0.75 | PFLU_RS24085 | | Holliday junction branch migration DNA helicase RuvB | 0.27 | PFLU_RS25585 | | exodeoxyribonuclease V subunit alpha | low | > 109 |
| Pseudomonas simiae WCS417 | 0.75 | PS417_22445 | | ATP-dependent DNA helicase RuvB | 0.26 | PS417_23770 | | exodeoxyribonuclease V subunit alpha | low | > 88 |
| Pseudomonas aeruginosa PA14 | 0.75 | IKLFDK_04375 | | Holliday junction branch migration DNA helicase RuvB | 0.26 | IKLFDK_02695 | | exodeoxyribonuclease V subunit alpha | — | — |
| Pseudomonas aeruginosa PUPa3 | 0.75 | NPBIFN_04217 | ruvB | Holliday junction branch migration DNA helicase RuvB | 0.26 | NPBIFN_04540 | recD | exodeoxyribonuclease V subunit alpha | — | — |
| Pseudomonas aeruginosa MRSN321 | 0.75 | PFGADD_04158 | ruvB | Holliday junction branch migration DNA helicase RuvB | 0.26 | PFGADD_04481 | recD | exodeoxyribonuclease V subunit alpha | — | — |
| Pseudomonas orientalis W4I3 | 0.75 | QF045_RS24610 | | Holliday junction branch migration DNA helicase RuvB | 0.27 | QF045_RS26005 | | exodeoxyribonuclease V subunit alpha | low | > 93 |
| Pseudomonas sp. FW215-L2 | 0.74 | GFF5569 | | Holliday junction ATP-dependent DNA helicase RuvB | 0.26 | GFF5912 | | RecBCD enzyme subunit RecD | low | > 111 |
| Pseudomonas fluorescens FW300-N2C3 | 0.74 | AO356_18025 | | ATP-dependent DNA helicase RuvB | 0.26 | AO356_07910 | | exodeoxyribonuclease V subunit alpha | 0.38 | 10 |
| Pseudomonas stutzeri RCH2 | 0.74 | Psest_1497 | | Holliday junction DNA helicase, RuvB subunit | 0.25 | Psest_0214 | | exodeoxyribonuclease V, alpha subunit | — | — |
| Pseudomonas sp. SVBP6 | 0.74 | COO64_RS20100 | ruvB | Holliday junction branch migration DNA helicase RuvB | 0.27 | COO64_RS02685 | recD | exodeoxyribonuclease V subunit alpha | low | > 91 |
| Paraburkholderia graminis OAS925 | 0.72 | ABIE53_003495 | | Holliday junction DNA helicase RuvB | 0.27 | ABIE53_000496 | | exodeoxyribonuclease V alpha subunit | low | > 113 |
| Dyella japonica UNC79MFTsu3.2 | 0.67 | ABZR86_RS10830 | | Holliday junction branch migration DNA helicase RuvB | 0.25 | ABZR86_RS07670 | | exodeoxyribonuclease V subunit alpha | — | — |
Not shown: 77 genomes with orthologs for CSW01_09240 only; 0 genomes with orthologs for CSW01_11775 only