Conservation of cofitness between CSW01_09240 and CSW01_11775 in Vibrio cholerae E7946 ATCC 55056

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09240 Holliday junction branch migration DNA helicase RuvB 1.0 CSW01_11775 exodeoxyribonuclease V subunit alpha 0.69 15
Erwinia amylovora T8 0.81 OLJFJH_12860 Holliday junction branch migration DNA helicase RuvB 0.35 OLJFJH_09105 exodeoxyribonuclease V subunit alpha
Erwinia tracheiphila HP pepo 2.2 0.81 IJEDHG_22140 ruvB Holliday junction branch migration DNA helicase RuvB 0.34 IJEDHG_17210 recD exodeoxyribonuclease V subunit alpha
Erwinia tracheiphila SCR3 0.81 LU632_RS13410 ruvB Holliday junction branch migration DNA helicase RuvB 0.34 LU632_RS06195 recD exodeoxyribonuclease V subunit alpha
Pectobacterium carotovorum WPP14 0.81 HER17_RS11840 Holliday junction branch migration DNA helicase RuvB 0.35 HER17_RS16520 exodeoxyribonuclease V subunit alpha 0.63 16
Serratia liquefaciens MT49 0.81 IAI46_14620 Holliday junction branch migration DNA helicase RuvB 0.36 IAI46_20400 exodeoxyribonuclease V subunit alpha
Klebsiella michiganensis M5al 0.80 BWI76_RS18145 Holliday junction branch migration DNA helicase RuvB 0.33 BWI76_RS23225 exonuclease V subunit alpha
Klebsiella pneumoniae MRSN742743 0.80 GJGHJB_01799 ruvB Holliday junction branch migration DNA helicase RuvB 0.32 GJGHJB_00881 recD exodeoxyribonuclease V subunit alpha
Klebsiella pneumoniae MKP103 0.80 KDGMDA_25410 Holliday junction branch migration DNA helicase RuvB 0.32 KDGMDA_03805 exodeoxyribonuclease V subunit alpha low > 94
Enterobacter sp. TBS_079 0.80 MPMX20_02766 Holliday junction ATP-dependent DNA helicase RuvB 0.35 MPMX20_03682 RecBCD enzyme subunit RecD low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF1639 Holliday junction DNA helicase RuvB 0.33 GFF1300 Exodeoxyribonuclease V alpha chain (EC 3.1.11.5)
Enterobacter asburiae PDN3 0.79 EX28DRAFT_0696 Holliday junction DNA helicase subunit RuvB 0.36 EX28DRAFT_2894 DNA helicase/exodeoxyribonuclease V, alpha subunit (EC 3.1.11.5)
Escherichia coli BW25113 0.79 b1860 ruvB Holliday junction DNA helicase B (NCBI) 0.35 b2819 recD exonuclease V (RecBCD complex), alpha chain (NCBI) low > 76
Escherichia coli ECRC100 0.79 OKFHMN_26285 ruvB Holliday junction branch migration DNA helicase RuvB 0.35 OKFHMN_20055 recD exodeoxyribonuclease V subunit alpha
Escherichia fergusonii Becca 0.79 EFB2_02082 Holliday junction ATP-dependent DNA helicase RuvB 0.35 EFB2_01065 RecBCD enzyme subunit RecD
Escherichia coli ECRC98 0.79 JDDGAC_00860 ruvB Holliday junction branch migration DNA helicase RuvB 0.35 JDDGAC_23720 recD exodeoxyribonuclease V subunit alpha
Escherichia coli ECRC102 0.79 NIAGMN_01775 ruvB Holliday junction branch migration DNA helicase RuvB 0.35 NIAGMN_17825 recD exodeoxyribonuclease V subunit alpha
Escherichia coli ECRC62 0.79 BNILDI_15520 ruvB Holliday junction branch migration DNA helicase RuvB 0.35 BNILDI_10420 recD exodeoxyribonuclease V subunit alpha low > 75
Escherichia coli ECOR27 0.79 NOLOHH_16730 ruvB Holliday junction branch migration DNA helicase RuvB 0.35 NOLOHH_11940 recD exodeoxyribonuclease V subunit alpha
Escherichia coli BL21 0.79 ECD_01831 ATP-dependent DNA helicase, component of RuvABC resolvasome 0.35 ECD_02667 exonuclease V (RecBCD complex), alpha chain
Escherichia coli ECRC101 0.79 MCAODC_19120 ruvB Holliday junction branch migration DNA helicase RuvB 0.35 MCAODC_10580 recD exodeoxyribonuclease V subunit alpha
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_01868 Holliday junction ATP-dependent DNA helicase RuvB 0.35 OHPLBJKB_00911 RecBCD enzyme subunit RecD
Escherichia coli ECRC99 0.79 KEDOAH_01820 ruvB Holliday junction branch migration DNA helicase RuvB 0.35 KEDOAH_08075 recD exodeoxyribonuclease V subunit alpha
Escherichia coli Nissle 1917 0.79 ECOLIN_RS10360 Holliday junction branch migration DNA helicase RuvB 0.35 ECOLIN_RS15825 exodeoxyribonuclease V subunit alpha
Escherichia coli ECOR38 0.79 HEPCGN_04695 ruvB Holliday junction branch migration DNA helicase RuvB 0.35 HEPCGN_19310 recD exodeoxyribonuclease V subunit alpha 0.73 7
Shewanella sp. ANA-3 0.77 Shewana3_1957 ruvB Holliday junction DNA helicase RuvB (RefSeq) 0.27 Shewana3_2247 exodeoxyribonuclease V, alpha subunit (RefSeq)
Shewanella oneidensis MR-1 0.77 SO2429 ruvB Holliday junction DNA helicase RuvB (NCBI ptt file) 0.27 SO2147 recD exodeoxyribonuclease V, alpha subunit (NCBI ptt file) 0.37 17
Shewanella amazonensis SB2B 0.76 Sama_1839 ruvB Holliday junction DNA helicase RuvB (RefSeq) 0.25 Sama_1902 exodeoxyribonuclease V (RefSeq)
Pseudomonas syringae pv. syringae B728a ΔmexB 0.75 Psyr_1410 Holliday junction DNA helicase RuvB 0.27 Psyr_0682 DNA helicase/exodeoxyribonuclease V, alpha subunit
Pseudomonas syringae pv. syringae B728a 0.75 Psyr_1410 Holliday junction DNA helicase RuvB 0.27 Psyr_0682 DNA helicase/exodeoxyribonuclease V, alpha subunit
Pseudomonas sp. DMC3 0.75 GFF5184 Holliday junction ATP-dependent DNA helicase RuvB 0.27 GFF4914 RecBCD enzyme subunit RecD low > 89
Pseudomonas lactucae CFBP13502 0.75 GEMAOFIL_04641 Holliday junction ATP-dependent DNA helicase RuvB 0.27 GEMAOFIL_04900 RecBCD enzyme subunit RecD low > 96
Pseudomonas fluorescens GW456-L13 0.75 PfGW456L13_1853 Holliday junction DNA helicase RuvB 0.27 PfGW456L13_5150 Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) low > 87
Pseudomonas protegens RBAN4 0.75 FABNJH_24090 ruvB Holliday junction branch migration DNA helicase RuvB 0.26 FABNJH_03840 recD exodeoxyribonuclease V subunit alpha
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS24085 Holliday junction branch migration DNA helicase RuvB 0.27 PFLU_RS25585 exodeoxyribonuclease V subunit alpha 0.32 55
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_03580 ATP-dependent DNA helicase RuvB 0.27 AO353_06040 exodeoxyribonuclease V subunit alpha 0.59 2
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_637 Holliday junction DNA helicase RuvB 0.26 Pf1N1B4_1234 Exodeoxyribonuclease V alpha chain (EC 3.1.11.5)
Pseudomonas fluorescens SBW25 0.75 PFLU_RS24085 Holliday junction branch migration DNA helicase RuvB 0.27 PFLU_RS25585 exodeoxyribonuclease V subunit alpha low > 109
Pseudomonas simiae WCS417 0.75 PS417_22445 ATP-dependent DNA helicase RuvB 0.26 PS417_23770 exodeoxyribonuclease V subunit alpha low > 88
Pseudomonas aeruginosa PA14 0.75 IKLFDK_04375 Holliday junction branch migration DNA helicase RuvB 0.26 IKLFDK_02695 exodeoxyribonuclease V subunit alpha
Pseudomonas aeruginosa PUPa3 0.75 NPBIFN_04217 ruvB Holliday junction branch migration DNA helicase RuvB 0.26 NPBIFN_04540 recD exodeoxyribonuclease V subunit alpha
Pseudomonas aeruginosa MRSN321 0.75 PFGADD_04158 ruvB Holliday junction branch migration DNA helicase RuvB 0.26 PFGADD_04481 recD exodeoxyribonuclease V subunit alpha
Pseudomonas orientalis W4I3 0.75 QF045_RS24610 Holliday junction branch migration DNA helicase RuvB 0.27 QF045_RS26005 exodeoxyribonuclease V subunit alpha low > 93
Pseudomonas sp. FW215-L2 0.74 GFF5569 Holliday junction ATP-dependent DNA helicase RuvB 0.26 GFF5912 RecBCD enzyme subunit RecD low > 111
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_18025 ATP-dependent DNA helicase RuvB 0.26 AO356_07910 exodeoxyribonuclease V subunit alpha 0.38 10
Pseudomonas stutzeri RCH2 0.74 Psest_1497 Holliday junction DNA helicase, RuvB subunit 0.25 Psest_0214 exodeoxyribonuclease V, alpha subunit
Pseudomonas sp. SVBP6 0.74 COO64_RS20100 ruvB Holliday junction branch migration DNA helicase RuvB 0.27 COO64_RS02685 recD exodeoxyribonuclease V subunit alpha low > 91
Paraburkholderia graminis OAS925 0.72 ABIE53_003495 Holliday junction DNA helicase RuvB 0.27 ABIE53_000496 exodeoxyribonuclease V alpha subunit low > 113
Dyella japonica UNC79MFTsu3.2 0.67 ABZR86_RS10830 Holliday junction branch migration DNA helicase RuvB 0.25 ABZR86_RS07670 exodeoxyribonuclease V subunit alpha

Not shown: 77 genomes with orthologs for CSW01_09240 only; 0 genomes with orthologs for CSW01_11775 only