Conservation of cofitness between CSW01_02500 and CSW01_11705 in Vibrio cholerae E7946 ATCC 55056

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02500 deoxyribonuclease 1.0 CSW01_11705 MFS transporter 0.81 1
Enterobacter sp. TBS_079 0.63 MPMX20_03803 Endonuclease-1 0.20 MPMX20_01024 Anhydromuropeptide permease low > 85
Klebsiella michiganensis M5al 0.63 BWI76_RS24065 deoxyribonuclease I 0.19 BWI76_RS06500 muropeptide transporter AmpG low > 92
Enterobacter asburiae PDN3 0.62 EX28DRAFT_2983 Endonuclease I 0.19 EX28DRAFT_2538 AmpG-like permease low > 76
Dickeya dianthicola ME23 0.62 DZA65_RS19620 deoxyribonuclease I 0.20 DZA65_RS05990 muropeptide MFS transporter AmpG low > 75
Serratia liquefaciens MT49 0.61 IAI46_21380 deoxyribonuclease I 0.20 IAI46_04990 muropeptide MFS transporter AmpG low > 86
Dickeya dadantii 3937 0.61 DDA3937_RS18550 deoxyribonuclease I 0.21 DDA3937_RS05620 muropeptide MFS transporter AmpG low > 74
Pectobacterium carotovorum WPP14 0.61 HER17_RS02645 deoxyribonuclease I 0.19 HER17_RS15870 muropeptide MFS transporter AmpG low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF3047 Endonuclease I precursor (EC 3.1.21.1) @ Extracellular deoxyribonuclease Dns (EC 3.1.21.-) 0.19 GFF4348 AmpG permease low > 78
Escherichia coli ECRC62 0.61 BNILDI_09735 endA deoxyribonuclease I 0.20 BNILDI_22705 ampG muropeptide MFS transporter AmpG low > 75
Rahnella sp. WP5 0.61 EX31_RS02655 deoxyribonuclease I 0.20 EX31_RS22225 muropeptide MFS transporter AmpG low > 89
Escherichia coli BW25113 0.61 b2945 endA DNA-specific endonuclease I (NCBI) 0.20 b0433 ampG muropeptide transporter (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_00773 Endonuclease-1 0.20 OHPLBJKB_03240 Protein AmpG low > 73
Escherichia coli ECOR27 0.61 NOLOHH_11155 endA deoxyribonuclease I 0.20 NOLOHH_01290 ampG muropeptide MFS transporter AmpG low > 75
Escherichia coli ECOR38 0.61 HEPCGN_18590 endA deoxyribonuclease I 0.20 HEPCGN_06970 ampG muropeptide MFS transporter AmpG low > 87
Escherichia coli BL21 0.61 ECD_02775 DNA-specific endonuclease I 0.20 ECD_00384 muropeptide transporter low > 61
Dickeya dianthicola 67-19 0.61 HGI48_RS18485 deoxyribonuclease I 0.20 HGI48_RS05665 muropeptide MFS transporter AmpG low > 71
Escherichia coli Nissle 1917 0.61 ECOLIN_RS16385 deoxyribonuclease I 0.20 ECOLIN_RS02600 muropeptide MFS transporter AmpG low > 55
Pantoea sp. MT58 0.61 IAI47_03625 deoxyribonuclease I 0.19 IAI47_14675 muropeptide MFS transporter AmpG low > 76
Escherichia fergusonii Becca 0.60 EFB2_00957 Endonuclease-1 0.20 EFB2_03624 Anhydromuropeptide permease low > 86
Escherichia coli ECRC102 0.60 NIAGMN_17050 endA deoxyribonuclease I 0.20 NIAGMN_06410 ampG muropeptide MFS transporter AmpG — —
Escherichia coli ECRC101 0.60 MCAODC_09805 endA deoxyribonuclease I 0.20 MCAODC_27580 ampG muropeptide MFS transporter AmpG low > 87
Escherichia coli ECRC99 0.60 KEDOAH_08855 endA deoxyribonuclease I 0.20 KEDOAH_19610 ampG muropeptide MFS transporter AmpG — —
Escherichia coli ECRC100 0.60 OKFHMN_19285 endA deoxyribonuclease I 0.20 OKFHMN_08355 ampG muropeptide MFS transporter AmpG low > 80
Escherichia coli ECRC98 0.60 JDDGAC_22915 endA deoxyribonuclease I 0.20 JDDGAC_12010 ampG muropeptide MFS transporter AmpG low > 86
Erwinia amylovora T8 0.59 OLJFJH_08580 deoxyribonuclease I 0.17 OLJFJH_18000 muropeptide MFS transporter AmpG low > 58
Shewanella oneidensis MR-1 0.58 SO0833 endA endonuclease I (NCBI ptt file) 0.27 SO3814 ampG protein, putative (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.56 Shewana3_3443 endonuclease I (RefSeq) 0.27 Shewana3_0783 major facilitator transporter (RefSeq) low > 73
Shewanella amazonensis SB2B 0.55 Sama_0576 deoxyribonuclease I (RefSeq) 0.27 Sama_2556 AmpG protein, putative (RefSeq) low > 62
Shewanella loihica PV-4 0.55 Shew_3223 deoxyribonuclease I (RefSeq) 0.26 Shew_2892 major facilitator transporter (RefSeq) low > 60
Pseudomonas sp. DMC3 0.50 GFF893 Extracellular deoxyribonuclease 0.20 GFF2134 hypothetical protein low > 89
Pseudomonas simiae WCS417 0.49 PS417_18420 deoxyribonuclease 0.19 PS417_22815 permease low > 88
Pseudomonas fluorescens SBW25 0.49 PFLU_RS20395 deoxyribonuclease 0.20 PFLU_RS24475 AmpG family muropeptide MFS transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.49 PFLU_RS20395 deoxyribonuclease 0.20 PFLU_RS24475 AmpG family muropeptide MFS transporter low > 109
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_6039 Endonuclease I precursor (EC 3.1.21.1) 0.19 Pf1N1B4_3168 AmpG permease low > 87
Pseudomonas sp. RS175 0.48 PFR28_02739 Extracellular deoxyribonuclease 0.19 PFR28_00495 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.48 AO353_20795 deoxyribonuclease 0.19 AO353_16925 AmpG family muropeptide MFS transporter low > 101
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_3916 Endonuclease I precursor (EC 3.1.21.1) 0.19 PfGW456L13_4645 AmpG permease low > 87
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_158 Endonuclease I precursor (EC 3.1.21.1) 0.18 Pf6N2E2_2971 AmpG permease low > 103
Pseudomonas sp. SVBP6 0.47 COO64_RS10310 endonuclease 0.19 COO64_RS11990 AmpG family muropeptide MFS transporter low > 93
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_2148 Deoxyribonuclease I 0.20 Psyr_4078 AmpG-related permease low > 86
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_2148 Deoxyribonuclease I 0.20 Psyr_4078 AmpG-related permease low > 86
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_00985 deoxyribonuclease 0.19 AO356_05555 AmpG family muropeptide MFS transporter low > 104
Pseudomonas sp. BP01 0.47 JOY50_RS04250 endonuclease 0.20 JOY50_RS15020 AmpG family muropeptide MFS transporter low > 84
Pseudomonas putida KT2440 0.46 PP_2451 extracellular DNA endonuclease 0.20 PP_1355 Muropeptide permease AmpG low > 96
Pseudomonas sp. S08-1 0.45 OH686_20125 Endonuclease I precursor 0.14 OH686_08200 AmpG permease low > 80

Not shown: 2 genomes with orthologs for CSW01_02500 only; 39 genomes with orthologs for CSW01_11705 only