Conservation of cofitness between CSW01_05920 and CSW01_10285 in Vibrio cholerae E7946 ATCC 55056

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05920 dicarboxylate/amino acid:cation symporter 1.0 CSW01_10285 heme exporter protein CcmB 0.55 13
Alteromonas macleodii MIT1002 0.81 MIT1002_01542 Glutamate-aspartate carrier protein 0.45 MIT1002_00961 Cytochrome c-type biogenesis protein CcmB — —
Shewanella oneidensis MR-1 0.67 SO0157 proton/glutamate symporter (NCBI ptt file) 0.68 SO0262 ccmB heme exporter protein CcmB (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.66 Shewana3_0142 sodium:dicarboxylate symporter (RefSeq) 0.69 Shewana3_0230 heme exporter protein CcmB (RefSeq) low > 73
Shewanella loihica PV-4 0.64 Shew_3625 sodium:dicarboxylate symporter (RefSeq) 0.62 Shew_0189 heme exporter protein CcmB (RefSeq) — —
Pseudomonas segetis P6 0.33 ACVTMO_RS00795 dicarboxylate/amino acid:cation symporter 0.35 ACVTMO_RS15415 ccmB heme exporter protein CcmB — —
Shewanella amazonensis SB2B 0.32 Sama_1319 symporter for L-glutamate, L-glutamine, and L-aspartate (from data) 0.67 Sama_0244 heme exporter protein CcmB (RefSeq) low > 62
Pseudomonas stutzeri RCH2 0.32 Psest_4075 symporter for L-glutamate, L-glutamine, and L-proline (from data) 0.32 Psest_1755 heme exporter protein CcmB — —
Pantoea agglomerans CFBP13505 P0401 0.31 PagCFBP13516_RS17945 gltP glutamate/aspartate:proton symporter GltP 0.52 PagCFBP13516_RS06260 ccmB heme exporter protein CcmB low > 80
Pectobacterium carotovorum WPP14 0.30 HER17_RS14145 glutamate/aspartate:proton symporter GltP 0.49 HER17_RS09035 heme exporter protein CcmB low > 75
Pantoea sp. MT58 0.30 IAI47_17710 glutamate/aspartate:proton symporter GltP 0.52 IAI47_06070 heme exporter protein CcmB low > 76
Pseudomonas lactucae CFBP13502 0.30 GEMAOFIL_00297 Proton/glutamate-aspartate symporter 0.37 GEMAOFIL_01871 Heme exporter protein B — —
Pseudomonas aeruginosa MRSN321 0.30 DY961_RS25695 gltP;go_component=membrane|0016020||IEA;go_function=symporter glutamate/aspartate:proton symporter GltP 0.36 DY961_RS05530 ccmB;go_function=heme heme exporter protein CcmB — —
Pseudomonas aeruginosa PUPa3 0.30 DQ20_RS58130 gltP;go_component=membrane|0016020||IEA;go_function=symporter glutamate/aspartate:proton symporter GltP 0.36 DQ20_RS47260 ccmB;go_function=heme heme exporter protein CcmB — —
Pseudomonas simiae WCS417 0.30 PS417_00470 glutamate:protein symporter 0.37 PS417_08695 heme transporter — —
Pseudomonas aeruginosa PA14 0.30 IKLFDK_26015 glutamate/aspartate:proton symporter GltP 0.36 IKLFDK_07020 heme exporter protein CcmB — —
Pseudomonas putida KT2440 0.30 PP_0137 glutamate/aspartate-proton DAACS transporter 0.32 PP_4326 protoheme IX ABC transporter - permease subunit — —
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS00460 glutamate/aspartate:proton symporter GltP 0.35 PFLU_RS08650 heme exporter protein CcmB 0.51 67
Pseudomonas fluorescens SBW25 0.30 PFLU_RS00460 glutamate/aspartate:proton symporter GltP 0.35 PFLU_RS08650 heme exporter protein CcmB low > 109
Pseudomonas orientalis W4I3 0.30 QF045_RS03420 glutamate/aspartate:proton symporter GltP 0.36 QF045_RS11410 heme exporter protein CcmB low > 93
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_0174 Sodium:dicarboxylate symporter 0.32 Psyr_3392 Cytochrome c-type biogenesis protein CcmB — —
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_0174 Sodium:dicarboxylate symporter 0.32 Psyr_3392 Cytochrome c-type biogenesis protein CcmB — —
Serratia liquefaciens MT49 0.30 IAI46_01410 glutamate/aspartate:proton symporter GltP 0.65 IAI46_18105 heme exporter protein CcmB low > 87
Erwinia amylovora T8 0.30 OLJFJH_03330 glutamate/aspartate:proton symporter GltP 0.44 OLJFJH_11080 heme exporter protein CcmB low > 58
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_4148 Glutamate-aspartate carrier protein 0.34 Pf6N2E2_2559 ABC transporter involved in cytochrome c biogenesis, CcmB subunit — —
Pseudomonas sp. DMC3 0.29 GFF617 Proton/glutamate-aspartate symporter 0.36 GFF2486 Heme exporter protein B — —
Kangiella aquimarina DSM 16071 0.29 B158DRAFT_2215 Na+/H+-dicarboxylate symporters 0.48 B158DRAFT_1324 heme exporter protein CcmB low > 40
Pseudomonas protegens RBAN4 0.29 FABNJH_00500 gltP glutamate/aspartate:proton symporter GltP 0.34 FABNJH_08730 ccmB heme exporter protein CcmB — —
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_11400 glutamate:protein symporter 0.35 AO356_03655 heme transporter — —
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_578 Glutamate-aspartate carrier protein 0.36 PfGW456L13_4315 ABC transporter involved in cytochrome c biogenesis, CcmB subunit — —
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_10990 glutamate:protein symporter 0.34 AO353_18855 heme transporter — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF1460 Glutamate-aspartate carrier protein 0.58 GFF4881 ABC transporter involved in cytochrome c biogenesis, CcmB subunit — —
Pseudomonas sp. BP01 0.29 JOY50_RS21035 gltP glutamate/aspartate:proton symporter GltP 0.29 JOY50_RS00500 ccmB heme exporter protein CcmB — —
Escherichia coli ECOR38 0.29 HEPCGN_11410 gltP glutamate/aspartate:proton symporter GltP 0.56 HEPCGN_22550 ccmB heme exporter protein CcmB low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.29 OHPLBJKB_03963 Proton/glutamate-aspartate symporter 0.56 OHPLBJKB_01511 Heme exporter protein B low > 74
Escherichia coli ECRC101 0.29 MCAODC_03295 gltP glutamate/aspartate:proton symporter GltP 0.56 MCAODC_14335 ccmB heme exporter protein CcmB low > 87
Escherichia coli ECRC99 0.29 KEDOAH_15365 gltP glutamate/aspartate:proton symporter GltP 0.56 KEDOAH_04900 ccmB heme exporter protein CcmB — —
Escherichia coli BW25113 0.29 b4077 gltP glutamate/aspartate:proton symporter (NCBI) 0.56 b2200 ccmB heme exporter subunit (NCBI) low > 76
Escherichia coli BL21 0.29 ECD_03949 glutamate/aspartate:proton symporter 0.56 ECD_02127 heme export ABC transporter permease low > 61
Escherichia coli ECOR27 0.29 NOLOHH_05035 gltP glutamate/aspartate:proton symporter GltP 0.56 NOLOHH_14860 ccmB heme exporter protein CcmB low > 75
Escherichia coli ECRC102 0.29 NIAGMN_10630 gltP glutamate/aspartate:proton symporter GltP 0.56 NIAGMN_21050 ccmB heme exporter protein CcmB low > 80
Escherichia coli ECRC100 0.29 OKFHMN_12785 gltP glutamate/aspartate:proton symporter GltP 0.56 OKFHMN_23285 ccmB heme exporter protein CcmB low > 79
Pseudomonas sp. RS175 0.29 PFR28_04638 Proton/glutamate-aspartate symporter 0.34 PFR28_00866 Heme exporter protein B — —
Escherichia fergusonii Becca 0.29 EFB2_04512 Proton/glutamate-aspartate symporter 0.56 EFB2_01656 Heme exporter protein B low > 86
Escherichia coli ECRC62 0.29 BNILDI_06490 gltP glutamate/aspartate:proton symporter GltP 0.56 BNILDI_13780 ccmB heme exporter protein CcmB low > 75
Escherichia coli ECRC98 0.29 JDDGAC_16420 gltP glutamate/aspartate:proton symporter GltP 0.56 JDDGAC_27245 ccmB heme exporter protein CcmB low > 87
Escherichia coli Nissle 1917 0.29 ECOLIN_RS23590 glutamate/aspartate:proton symporter GltP 0.56 ECOLIN_RS12855 heme exporter protein CcmB low > 55
Klebsiella pneumoniae MRSN742743 0.28 KFA93_RS21525 gltP;go_component=membrane|0016020||IEA;go_function=symporter glutamate/aspartate:proton symporter GltP 0.40 KFA93_RS15220 ccmB;go_function=heme heme exporter protein CcmB low > 82
Klebsiella pneumoniae MKP103 0.28 KDGMDA_10570 glutamate/aspartate:proton symporter GltP 0.40 KDGMDA_23865 heme exporter protein CcmB — —
Pseudomonas sp. SVBP6 0.28 COO64_RS02545 gltP glutamate/aspartate:proton symporter GltP 0.31 COO64_RS25695 ccmB heme exporter protein CcmB — —
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_1888 Glutamate-aspartate carrier protein 0.35 Pf1N1B4_3640 ABC transporter involved in cytochrome c biogenesis, CcmB subunit — —
Marinobacter adhaerens HP15 0.27 HP15_2676 proton/sodium-glutamate symport protein 0.49 HP15_2285 cytochrome c-type biogenesis protein CcmB — —
Brevundimonas sp. GW460-12-10-14-LB2 0.26 A4249_RS05595 dicarboxylate/amino acid:cation symporter 0.27 A4249_RS12780 heme exporter protein CcmB — —

Not shown: 14 genomes with orthologs for CSW01_05920 only; 17 genomes with orthologs for CSW01_10285 only