Conservation of cofitness between CSW01_06785 and CSW01_10265 in Vibrio cholerae E7946 ATCC 55056

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06785 FAA hydrolase family protein 1.0 CSW01_10265 c-type cytochrome biogenesis protein CcmF 0.85 2
Alteromonas macleodii MIT1002 0.67 MIT1002_01148 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 0.56 MIT1002_00965 Cytochrome c-type biogenesis protein CcmF — —
Azospirillum sp. SherDot2 0.65 MPMX19_02073 hypothetical protein 0.45 MPMX19_02533 Cytochrome c-type biogenesis protein CcmF — —
Sinorhizobium meliloti 1021 0.65 SMc03207 aromatic amino acid degradation protein 0.42 SMc02363 cytochrome C-type biogenesis transmembrane protein low > 103
Shewanella loihica PV-4 0.63 Shew_1438 fumarylacetoacetate (FAA) hydrolase (RefSeq) 0.51 Shew_0193 cytochrome c-type biogenesis protein CcmF (RefSeq) low > 60
Shewanella sp. ANA-3 0.63 Shewana3_2778 fumarylacetoacetate (FAA) hydrolase (RefSeq) 0.50 Shewana3_0234 cytochrome c-type biogenesis protein CcmF (RefSeq) low > 73
Shewanella oneidensis MR-1 0.62 SO1670 fumarylacetoacetate hydrolase (EC 3.7.1.2) (from data) 0.49 SO0266 ccmF-1 cytochrome c-type biogenesis protein CcmF (NCBI ptt file) low > 76
Pseudomonas sp. S08-1 0.62 OH686_21090 Fumarylacetoacetase 0.51 OH686_02635 cytochrome c-type biogenesis protein CcmF — —
Kangiella aquimarina DSM 16071 0.61 B158DRAFT_1448 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 0.54 B158DRAFT_1328 c-type cytochrome biogenesis protein CcmF — —
Shewanella amazonensis SB2B 0.61 Sama_2219 fumarylacetoacetate hydrolase family protein (RefSeq) 0.51 Sama_0248 cytochrome c-type biogenesis protein CcmF (RefSeq) low > 62
Pseudomonas stutzeri RCH2 0.60 Psest_3512 fumarylacetoacetate (FAA) hydrolase (EC 3.7.1.2) (from data) 0.51 Psest_1759 c-type cytochrome biogenesis protein CcmF — —
Pseudomonas segetis P6 0.60 ACVTMO_RS14150 fumarylacetoacetate hydrolase family protein 0.55 ACVTMO_RS15395 heme lyase CcmF/NrfE family subunit — —
Caulobacter crescentus NA1000 0.57 CCNA_02614 fumarylacetoacetase superfamily protein 0.38 CCNA_02848 heme chaperone-apocytochrome heme-lyase low > 66
Caulobacter crescentus NA1000 Δfur 0.57 CCNA_02614 fumarylacetoacetase superfamily protein 0.38 CCNA_02848 heme chaperone-apocytochrome heme-lyase low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.55 A4249_RS11225 fumarylacetoacetate hydrolase family protein 0.34 A4249_RS10825 heme lyase CcmF/NrfE family subunit — —
Sphingomonas koreensis DSMZ 15582 0.55 Ga0059261_2473 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 0.30 Ga0059261_0172 Cytochrome c biogenesis factor low > 68
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_00795 ycgM 2-keto-4-pentenoate hydratase 0.46 OKGIIK_08585 ccmF c-type cytochrome biogenesis protein CcmF — —
Rhodanobacter denitrificans MT42 0.52 LRK55_RS05595 fumarylacetoacetate hydrolase family protein 0.48 LRK55_RS15815 heme lyase CcmF/NrfE family subunit — —
Rhodanobacter sp000427505 FW510-R12 0.51 LRK53_RS17205 fumarylacetoacetate hydrolase family protein 0.45 LRK53_RS12730 heme lyase CcmF/NrfE family subunit — —
Rhodanobacter denitrificans FW104-10B01 0.51 LRK54_RS05840 fumarylacetoacetate hydrolase family protein 0.48 LRK54_RS16065 heme lyase CcmF/NrfE family subunit — —
Lysobacter sp. OAE881 0.50 ABIE51_RS04245 fumarylacetoacetate hydrolase family protein 0.48 ABIE51_RS08700 heme lyase CcmF/NrfE family subunit low > 62
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS18485 fumarylacetoacetate hydrolase family protein 0.48 ABZR86_RS06445 heme lyase CcmF/NrfE family subunit — —
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.4526.1 Fumarylacetoacetate hydrolase family protein 0.47 Xcc-8004.3190.1 Cytochrome c heme lyase subunit CcmF low > 74
Pseudomonas putida KT2440 0.44 PP_3205 Fumarylacetoacetate hydrolase family protein 0.50 PP_4322 holocytochrome c synthetase — —
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_29105 fumarylacetoacetate hydrolase 0.52 AO356_03635 cytochrome C biogenesis protein CcmF — —
Pseudomonas sp. BP01 0.43 JOY50_RS13570 fumarylacetoacetate hydrolase family protein 0.49 JOY50_RS00480 heme lyase CcmF/NrfE family subunit — —
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS09620 2-keto-4-pentenoate hydratase 0.51 PFLU_RS08670 heme lyase CcmF/NrfE family subunit low > 109
Pseudomonas fluorescens SBW25 0.40 PFLU_RS09620 2-keto-4-pentenoate hydratase 0.51 PFLU_RS08670 heme lyase CcmF/NrfE family subunit low > 109

Not shown: 16 genomes with orthologs for CSW01_06785 only; 50 genomes with orthologs for CSW01_10265 only