Conservation of cofitness between CSW01_06755 and CSW01_09900 in Vibrio cholerae E7946 ATCC 55056

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06755 acetate--CoA ligase 1.0 CSW01_09900 ribonuclease D 0.53 11
Marinobacter adhaerens HP15 0.64 HP15_2053 PrpE protein 0.22 HP15_1882 ribonuclease D low > 73
Alteromonas macleodii MIT1002 0.64 MIT1002_01463 Acetyl-coenzyme A synthetase 0.38 MIT1002_02587 Ribonuclease D low > 70
Pseudomonas sp. SVBP6 0.61 COO64_RS07565 propionyl-CoA synthetase 0.27 COO64_RS26150 rnd ribonuclease D low > 93
Pseudomonas aeruginosa PA14 0.61 IKLFDK_18215 Uncharacterized protein PA3568 0.27 IKLFDK_06140 ribonuclease D low > 98
Pseudomonas aeruginosa PUPa3 0.61 DQ20_RS41990 propionyl-CoA synthetase 0.27 DQ20_RS52945 rnd;go_function=RNA ribonuclease D low > 101
Pseudomonas aeruginosa MRSN321 0.61 DY961_RS15165 propionyl-CoA synthetase 0.27 DY961_RS18805 rnd;go_function=RNA ribonuclease D low > 100
Rhodospirillum rubrum S1H 0.60 Rru_A1046 AMP-dependent synthetase and ligase (NCBI) 0.21 Rru_A2073 Ribonuclease D (NCBI) — —
Azospirillum sp. SherDot2 0.59 MPMX19_01753 Acetyl-coenzyme A synthetase 0.22 MPMX19_00986 Ribonuclease D low > 112
Azospirillum brasilense Sp245 0.59 AZOBR_RS06340 acyl-CoA synthetase 0.22 AZOBR_RS16220 ribonuclease D low > 97
Xanthobacter sp. DMC5 0.58 GFF4271 Acetyl-coenzyme A synthetase 0.19 GFF3531 Ribonuclease D — —
Pseudomonas putida KT2440 0.58 PP_2351 propionyl-CoA synthetase 0.29 PP_4591 Ribonuclease D low > 96
Shewanella sp. ANA-3 0.58 Shewana3_1675 AMP-dependent synthetase and ligase (RefSeq) 0.32 Shewana3_2385 ribonuclease D (RefSeq) low > 73
Rhizobium sp. OAE497 0.58 ABIE40_RS19175 propionyl-CoA synthetase 0.22 ABIE40_RS06640 ribonuclease D — —
Shewanella amazonensis SB2B 0.57 Sama_1364 acyl-coenzyme A synthetase/AMP-(fatty) acid ligase (RefSeq) 0.33 Sama_1933 ribonuclease D (RefSeq) low > 62
Rhodopseudomonas palustris CGA009 0.57 TX73_023385 propionyl-CoA synthetase 0.19 TX73_015755 ribonuclease D low > 86
Magnetospirillum magneticum AMB-1 0.57 AMB_RS11645 propionyl-CoA synthetase 0.20 AMB_RS14275 ribonuclease D — —
Pseudomonas sp. BP01 0.57 JOY50_RS10865 propionyl-CoA synthetase 0.28 JOY50_RS01555 rnd ribonuclease D low > 84
Bosea sp. OAE506 0.57 ABIE41_RS09315 propionyl-CoA synthetase 0.21 ABIE41_RS16115 ribonuclease D — —
Phaeobacter inhibens DSM 17395 0.57 PGA1_c11900 Propionate--CoA ligase (EC 6.2.1.17) (from data) 0.18 PGA1_c13290 putative ribonuclease D — —
Dinoroseobacter shibae DFL-12 0.57 Dshi_0825 AMP-dependent synthetase and ligase (RefSeq) 0.17 Dshi_1887 ribonuclease D (RefSeq) low > 64
Shewanella loihica PV-4 0.57 Shew_2568 AMP-dependent synthetase and ligase (RefSeq) 0.35 Shew_2187 ribonuclease D (RefSeq) low > 60
Sinorhizobium meliloti 1021 0.54 SMc04095 acyl-COA synthetase 0.19 SMc00622 ribonuclease D protein low > 103
Rhodanobacter denitrificans FW104-10B01 0.43 LRK54_RS00715 propionate--CoA ligase 0.16 LRK54_RS16010 ribonuclease D low > 59
Rhodanobacter denitrificans MT42 0.42 LRK55_RS00490 propionate--CoA ligase 0.16 LRK55_RS15770 ribonuclease D low > 63
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS08500 propionate--CoA ligase 0.18 ABZR86_RS07350 ribonuclease D low > 74
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_06545 prpE propionate--CoA ligase 0.16 OKGIIK_08985 Ribonuclease D low > 53
Rhodanobacter sp000427505 FW510-R12 0.40 LRK53_RS09440 propionate--CoA ligase 0.17 LRK53_RS12770 ribonuclease D low > 59
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF4266 Propionate--CoA ligase (EC 6.2.1.17) 0.43 GFF2819 Ribonuclease D (EC 3.1.26.3) low > 78
Escherichia coli ECRC101 0.40 MCAODC_28115 prpE propionate--CoA ligase 0.43 MCAODC_18805 rnd ribonuclease D low > 87
Escherichia coli ECRC100 0.40 OKFHMN_08885 prpE propionate--CoA ligase 0.43 OKFHMN_26605 rnd ribonuclease D low > 79
Escherichia coli ECRC102 0.40 NIAGMN_06940 prpE propionate--CoA ligase 0.43 NIAGMN_01460 rnd ribonuclease D low > 80
Escherichia coli ECRC98 0.40 JDDGAC_12540 prpE propionate--CoA ligase 0.43 JDDGAC_01180 rnd ribonuclease D low > 87
Escherichia coli Nissle 1917 0.39 ECOLIN_RS02165 propionate--CoA ligase 0.43 ECOLIN_RS10035 ribonuclease D — —
Escherichia coli ECOR38 0.39 HEPCGN_07470 prpE propionate--CoA ligase 0.43 HEPCGN_04995 rnd ribonuclease D low > 88
Escherichia coli ECRC99 0.39 KEDOAH_19080 prpE propionate--CoA ligase 0.43 KEDOAH_01505 rnd ribonuclease D — —
Escherichia fergusonii Becca 0.39 EFB2_03703 Acetyl-coenzyme A synthetase 0.43 EFB2_02196 Ribonuclease D low > 86
Escherichia coli ECOR27 0.39 NOLOHH_01760 prpE propionate--CoA ligase 0.43 NOLOHH_17125 rnd ribonuclease D low > 76
Escherichia coli BL21 0.39 ECD_00289 propionate--CoA ligase 0.44 ECD_01774 ribonuclease D low > 61
Escherichia coli ECRC62 0.39 BNILDI_23175 prpE propionate--CoA ligase 0.43 BNILDI_15910 rnd ribonuclease D low > 75
Escherichia coli BW25113 0.39 b0335 prpE predicted propionyl-CoA synthetase with ATPase domain (NCBI) 0.44 b1804 rnd ribonuclease D (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_03336 Acetyl-coenzyme A synthetase 0.43 OHPLBJKB_01929 Ribonuclease D low > 74

Not shown: 19 genomes with orthologs for CSW01_06755 only; 41 genomes with orthologs for CSW01_09900 only