| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_07065 | | multidrug resistance protein | 1.0 | CSW01_09555 | | tRNA-(ms[2]io[6]A)-hydroxylase | 0.57 | 18 |
| Enterobacter asburiae PDN3 | 0.36 | EX28DRAFT_2613 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | 0.61 | EX28DRAFT_3463 | | Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA | low | > 76 |
| Pseudomonas segetis P6 | 0.28 | ACVTMO_RS11140 | | efflux transporter outer membrane subunit | 0.32 | ACVTMO_RS11130 | miaE | tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE | low | > 75 |
| Pseudomonas fluorescens FW300-N2E2 | 0.25 | Pf6N2E2_147 | | Outer membrane component of tripartite multidrug resistance system | 0.31 | Pf6N2E2_568 | | tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.25 | AO356_01035 | | multidrug RND transporter | 0.31 | AO356_24405 | | tRNA hydroxylase | low | > 104 |
| Pseudomonas simiae WCS417 | 0.25 | PS417_16920 | | multidrug RND transporter | 0.32 | PS417_14975 | | tRNA hydroxylase | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.25 | PFLU_RS18905 | | efflux transporter outer membrane subunit | 0.31 | PFLU_RS17005 | | tRNA hydroxylase | low | > 109 |
| Pseudomonas orientalis W4I3 | 0.25 | QF045_RS18630 | | efflux transporter outer membrane subunit | 0.31 | QF045_RS14985 | | tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE | low | > 93 |
| Pseudomonas fluorescens SBW25 | 0.25 | PFLU_RS18905 | | efflux transporter outer membrane subunit | 0.31 | PFLU_RS17005 | | tRNA hydroxylase | low | > 109 |
| Pseudomonas sp. RS175 | 0.25 | PFR28_02749 | | Toluene efflux pump outer membrane protein TtgF | 0.31 | PFR28_02373 | | hypothetical protein | low | > 88 |
| Pseudomonas lactucae CFBP13502 | 0.25 | GEMAOFIL_03699 | | Toluene efflux pump outer membrane protein TtgF | 0.32 | GEMAOFIL_03299 | | hypothetical protein | low | > 96 |
| Pseudomonas fluorescens FW300-N2E3 | 0.25 | AO353_27850 | | multidrug RND transporter | 0.32 | AO353_22955 | | tRNA hydroxylase | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.25 | Pf1N1B4_4000 | | Outer membrane component of tripartite multidrug resistance system | 0.31 | Pf1N1B4_4567 | | tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) | low | > 87 |
| Pseudomonas sp. SVBP6 | 0.25 | COO64_RS08910 | | efflux transporter outer membrane subunit | 0.34 | COO64_RS09940 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 93 |
| Pseudomonas fluorescens GW456-L13 | 0.24 | PfGW456L13_2604 | | Outer membrane component of tripartite multidrug resistance system | 0.32 | PfGW456L13_3375 | | tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) | low | > 87 |
| Pseudomonas aeruginosa PA14 | 0.24 | IKLFDK_20075 | | RND transporter | 0.34 | IKLFDK_08660 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 98 |
| Pseudomonas aeruginosa PUPa3 | 0.24 | DQ20_RS50465 | | efflux transporter outer membrane subunit | 0.35 | DQ20_RS54725 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 101 |
| Pseudomonas aeruginosa MRSN321 | 0.24 | DY961_RS13400 | | efflux transporter outer membrane subunit | 0.35 | DY961_RS20645 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 100 |
| Pseudomonas sp. DMC3 | 0.24 | GFF1486 | | Toluene efflux pump outer membrane protein TtgI | 0.32 | GFF1701 | | hypothetical protein | low | > 89 |
| Pseudomonas putida KT2440 | 0.21 | PP_1263 | | putative Fusaric acid resistance protein | 0.32 | PP_2188 | | putative tRNA-(Ms(2)io(6)a)-hydroxylase | low | > 96 |
| Pseudomonas sp. BP01 | 0.20 | JOY50_RS15460 | | efflux transporter outer membrane subunit | 0.33 | JOY50_RS12775 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 84 |
| Pseudomonas syringae pv. syringae B728a | 0.20 | Psyr_1045 | | RND efflux system, outer membrane lipoprotein, NodT | 0.30 | Psyr_1728 | | tRNA--hydroxylase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.20 | Psyr_1045 | | RND efflux system, outer membrane lipoprotein, NodT | 0.30 | Psyr_1728 | | tRNA--hydroxylase | low | > 86 |
| Rahnella sp. WP5 | 0.18 | EX31_RS13650 | | efflux transporter outer membrane subunit | 0.40 | EX31_RS22630 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 89 |
| Serratia liquefaciens MT49 | 0.18 | IAI46_19995 | | efflux transporter outer membrane subunit | 0.65 | IAI46_02330 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 87 |
| Klebsiella michiganensis M5al | 0.18 | BWI76_RS23620 | | multidrug resistance transporter | 0.58 | BWI76_RS03020 | | tRNA hydroxylase | low | > 92 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.17 | GFF3807 | | RND efflux system, outer membrane lipoprotein, NodT family | 0.62 | GFF942 | | tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) | low | > 78 |
| Klebsiella pneumoniae MKP103 | 0.17 | KDGMDA_26550 | | multidrug resistance outer membrane protein MdtQ | 0.58 | KDGMDA_11510 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 95 |
| Enterobacter sp. TBS_079 | 0.17 | MPMX20_03107 | | Antibiotic efflux pump outer membrane protein ArpC | 0.62 | MPMX20_00558 | | hypothetical protein | low | > 85 |
| Pseudomonas sp. S08-1 | 0.16 | OH686_00935 | | Outer membrane factor (OMF) lipoprotein associated wth MdtABC efflux system | 0.32 | OH686_03955 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 80 |
| Acinetobacter baumannii LAC-4 | 0.15 | RR41_RS06060 | | multidrug efflux RND transporter outer membrane subunit AdeH | 0.33 | RR41_RS04875 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 55 |
| Pantoea agglomerans CFBP13505 P0401 | 0.14 | PagCFBP13505_RS04945 | | efflux transporter outer membrane subunit | 0.63 | PagCFBP13505_RS08940 | | tRNA hydroxylase | low | > 74 |
| Erwinia tracheiphila HP pepo 2.2 | 0.14 | IJEDHG_19970 | | RND transporter | 0.60 | IJEDHG_14135 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 61 |
| Pantoea sp. MT58 | 0.14 | IAI47_12395 | | efflux transporter outer membrane subunit | 0.63 | IAI47_16820 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 76 |
| Dickeya dadantii 3937 | 0.14 | DDA3937_RS14115 | | efflux transporter outer membrane subunit | 0.69 | DDA3937_RS05765 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 74 |
| Kangiella aquimarina DSM 16071 | 0.14 | B158DRAFT_0732 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | 0.33 | B158DRAFT_1015 | | Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA | low | > 40 |
| Pseudomonas stutzeri RCH2 | 0.14 | Psest_2141 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | 0.31 | Psest_2306 | | Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA | low | > 67 |
| Shewanella sp. ANA-3 | 0.13 | Shewana3_1994 | | outer membrane efflux protein (RefSeq) | 0.57 | Shewana3_2667 | | tRNA hydroxylase (RefSeq) | 0.33 | 65 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.11 | ABZR88_RS12550 | | efflux transporter outer membrane subunit | 0.17 | ABZR88_RS01640 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 71 |
| Shewanella oneidensis MR-1 | 0.11 | SO0822 | | outer membrane efflux family protein (NCBI ptt file) | 0.57 | SO1788 | miaE | tRNA-(MS[2]IO[6]A)-hydroxylase (NCBI ptt file) | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.11 | MIT1002_00868 | | Toluene efflux pump outer membrane protein TtgF precursor | 0.63 | MIT1002_02520 | | tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) | low | > 70 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.10 | CA264_08720 | | RND transporter | 0.16 | CA264_05350 | | tRNA 2-methylthio-N6-isopentenyl adenosine(37) hydroxylase MiaE | low | > 74 |
Not shown: 66 genomes with orthologs for CSW01_07065 only; 5 genomes with orthologs for CSW01_09555 only