Conservation of cofitness between CSW01_02420 and CSW01_09555 in Vibrio cholerae E7946 ATCC 55056

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02420 glutaminase 1.0 CSW01_09555 tRNA-(ms[2]io[6]A)-hydroxylase 0.59 8
Serratia liquefaciens MT49 0.70 IAI46_21450 glutaminase B 0.65 IAI46_02330 tRNA-(ms[2]io[6]A)-hydroxylase low > 87
Rahnella sp. WP5 0.69 EX31_RS02720 glutaminase B 0.40 EX31_RS22630 tRNA-(ms[2]io[6]A)-hydroxylase low > 89
Shewanella loihica PV-4 0.69 Shew_1126 glutaminase (RefSeq) 0.62 Shew_2514 tRNA--hydroxylase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.68 Sama_2487 Glutaminase (EC 3.5.1.2) (from data) 0.59 Sama_1218 tRNA-hydroxylase (RefSeq) low > 62
Klebsiella pneumoniae MKP103 0.67 KDGMDA_21590 glutaminase B 0.58 KDGMDA_11510 tRNA-(ms[2]io[6]A)-hydroxylase low > 95
Klebsiella michiganensis M5al 0.67 BWI76_RS15200 glutaminase 0.58 BWI76_RS03020 tRNA hydroxylase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF2512 Glutaminase (EC 3.5.1.2) 0.62 GFF942 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) low > 78
Enterobacter asburiae PDN3 0.65 EX28DRAFT_1196 L-glutaminase (EC 3.5.1.2) 0.61 EX28DRAFT_3463 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA low > 76
Enterobacter sp. TBS_079 0.65 MPMX20_02271 Glutaminase 2 0.62 MPMX20_00558 hypothetical protein low > 85
Shewanella sp. ANA-3 0.64 Shewana3_1184 Glutaminase (EC 3.5.1.2) (from data) 0.57 Shewana3_2667 tRNA hydroxylase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.64 SO3365 glsA Glutaminase (EC 3.5.1.2) (from data) 0.57 SO1788 miaE tRNA-(MS[2]IO[6]A)-hydroxylase (NCBI ptt file) low > 76
Pantoea sp. MT58 0.62 IAI47_20610 glutaminase B 0.63 IAI47_16820 tRNA-(ms[2]io[6]A)-hydroxylase low > 76
Pantoea agglomerans CFBP13505 P0401 0.62 PagCFBP13505_RS14195 glutaminase B 0.63 PagCFBP13505_RS08940 tRNA hydroxylase low > 74
Pseudomonas aeruginosa PUPa3 0.61 DQ20_RS53945 glsB;go_function=glutaminase glutaminase B 0.35 DQ20_RS54725 tRNA-(ms[2]io[6]A)-hydroxylase low > 101
Pseudomonas aeruginosa PA14 0.61 IKLFDK_07855 glutaminase B 0.34 IKLFDK_08660 tRNA-(ms[2]io[6]A)-hydroxylase 0.25 58
Pseudomonas aeruginosa MRSN321 0.61 DY961_RS19840 glsB;go_function=glutaminase glutaminase B 0.35 DY961_RS20645 tRNA-(ms[2]io[6]A)-hydroxylase low > 100
Pseudomonas sp. SVBP6 0.60 COO64_RS07985 glsB glutaminase B 0.34 COO64_RS09940 tRNA-(ms[2]io[6]A)-hydroxylase low > 93
Pseudomonas segetis P6 0.59 MPMX49_00172 Glutaminase 2 0.32 MPMX49_02239 hypothetical protein low > 75
Pseudomonas lactucae CFBP13502 0.58 GEMAOFIL_03498 Glutaminase 2 0.32 GEMAOFIL_03299 hypothetical protein low > 96
Pseudomonas simiae WCS417 0.58 PS417_15505 glutaminase 0.32 PS417_14975 tRNA hydroxylase low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_2292 L-glutaminase 0.30 Psyr_1728 tRNA--hydroxylase low > 86
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_2292 L-glutaminase 0.30 Psyr_1728 tRNA--hydroxylase low > 86
Pseudomonas fluorescens SBW25 0.58 PFLU_RS17490 glutaminase B 0.31 PFLU_RS17005 tRNA hydroxylase low > 109
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS17490 glutaminase B 0.31 PFLU_RS17005 tRNA hydroxylase low > 109
Pseudomonas orientalis W4I3 0.58 QF045_RS17545 glutaminase B 0.31 QF045_RS14985 tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE low > 93
Pseudomonas stutzeri RCH2 0.56 Psest_4081 Glutaminase (EC 3.5.1.2) (from data) 0.31 Psest_2306 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA low > 67
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_26790 Glutaminase (EC 3.5.1.2) (from data) 0.32 AO353_22955 tRNA hydroxylase low > 101
Pseudomonas sp. DMC3 0.56 GFF1705 Glutaminase 2 0.32 GFF1701 hypothetical protein low > 89
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_4436 Glutaminase (EC 3.5.1.2) 0.31 Pf1N1B4_4567 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) low > 87
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_2102 Glutaminase (EC 3.5.1.2) (from data) 0.31 Pf6N2E2_568 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) low > 103
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_21690 Glutaminase (EC 3.5.1.2) (from data) 0.31 AO356_24405 tRNA hydroxylase low > 104
Pseudomonas sp. RS175 0.55 PFR28_01340 Glutaminase 2 0.31 PFR28_02373 hypothetical protein 0.28 39
Pseudomonas sp. S08-1 0.55 OH686_13270 glutaminase A 0.32 OH686_03955 tRNA-(ms[2]io[6]A)-hydroxylase low > 80
Alteromonas macleodii MIT1002 0.51 MIT1002_02828 Glutaminase 2 0.63 MIT1002_02520 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) low > 70

Not shown: 45 genomes with orthologs for CSW01_02420 only; 12 genomes with orthologs for CSW01_09555 only