Conservation of cofitness between CSW01_05655 and CSW01_09390 in Vibrio cholerae E7946 ATCC 55056

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05655 malonyl-[acyl-carrier protein] O-methyltransferase BioC 1.0 CSW01_09390 SpoVR family protein 0.42 17
Serratia liquefaciens MT49 0.36 IAI46_06535 malonyl-ACP O-methyltransferase BioC 0.76 IAI46_14470 SpoVR family protein low > 87
Escherichia coli BL21 0.33 ECD_00744 malonyl-ACP O-methyltransferase, SAM-dependent 0.76 ECD_01163 SpoVR family stationary phase protein low > 61
Escherichia coli Nissle 1917 0.33 ECOLIN_RS04140 malonyl-ACP O-methyltransferase BioC 0.76 ECOLIN_RS07180 SpoVR family protein low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_02936 Malonyl-[acyl-carrier protein] O-methyltransferase 0.76 OHPLBJKB_02501 hypothetical protein low > 74
Escherichia fergusonii Becca 0.33 EFB2_03328 Malonyl-[acyl-carrier protein] O-methyltransferase 0.76 EFB2_02744 hypothetical protein low > 86
Escherichia coli BW25113 0.33 b0777 bioC predicted methltransferase, enzyme of biotin synthesis (NCBI) 0.76 b1188 ycgB ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 76
Pantoea agglomerans CFBP13505 P0401 0.33 PagCFBP13505_RS03780 malonyl-ACP O-methyltransferase BioC 0.75 PagCFBP13505_RS02720 SpoVR family protein low > 74
Escherichia coli ECOR38 0.33 HEPCGN_01650 bioC malonyl-ACP O-methyltransferase BioC 0.76 HEPCGN_24745 ycgB SpoVR family protein low > 88
Escherichia coli ECRC62 0.33 BNILDI_21030 bioC malonyl-ACP O-methyltransferase BioC 0.76 BNILDI_18895 ycgB SpoVR family protein low > 75
Escherichia coli ECRC99 0.33 KEDOAH_21520 bioC malonyl-ACP O-methyltransferase BioC 0.76 KEDOAH_25300 ycgB SpoVR family protein — —
Escherichia coli ECRC101 0.33 MCAODC_25605 bioC malonyl-ACP O-methyltransferase BioC 0.76 MCAODC_21885 ycgB SpoVR family protein low > 87
Escherichia coli ECRC100 0.33 OKFHMN_06390 bioC malonyl-ACP O-methyltransferase BioC 0.76 OKFHMN_28285 ycgB SpoVR family protein low > 79
Escherichia coli ECRC98 0.33 JDDGAC_10025 bioC malonyl-ACP O-methyltransferase BioC 0.76 JDDGAC_06225 ycgB SpoVR family protein low > 87
Escherichia coli ECRC102 0.33 NIAGMN_04435 bioC malonyl-ACP O-methyltransferase BioC 0.76 NIAGMN_27935 ycgB SpoVR family protein low > 80
Dickeya dadantii 3937 0.33 DDA3937_RS08520 malonyl-ACP O-methyltransferase BioC 0.77 DDA3937_RS11175 SpoVR family protein low > 74
Pectobacterium carotovorum WPP14 0.33 HER17_RS13450 malonyl-ACP O-methyltransferase BioC 0.76 HER17_RS11210 SpoVR family protein low > 75
Escherichia coli ECOR27 0.33 NOLOHH_22760 bioC malonyl-ACP O-methyltransferase BioC 0.76 NOLOHH_20730 ycgB SpoVR family protein low > 76
Dickeya dianthicola 67-19 0.32 HGI48_RS08685 malonyl-ACP O-methyltransferase BioC 0.77 HGI48_RS11200 SpoVR family protein low > 71
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_14150 malonyl-[acyl-carrier protein] O-methyltransferase BioC 0.69 AO356_14305 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 104
Pantoea sp. MT58 0.32 IAI47_13520 malonyl-ACP O-methyltransferase BioC 0.76 IAI47_08885 SpoVR family protein low > 76
Dickeya dianthicola ME23 0.31 DZA65_RS08975 malonyl-ACP O-methyltransferase BioC 0.77 DZA65_RS11545 SpoVR family protein low > 75
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_4763 Biotin synthesis protein BioC 0.68 Pf6N2E2_4799 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 103
Pseudomonas stutzeri RCH2 0.30 Psest_0414 biotin biosynthesis protein BioC 0.69 Psest_3674 Uncharacterized conserved protein low > 67
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_1150 Biotin synthesis protein BioC 0.68 PfGW456L13_1194 FIG004684: SpoVR-like protein low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF673 Biotin synthesis protein BioC 0.76 GFF2805 FIG004684: SpoVR-like protein low > 78
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_4684 biotin synthesis protein BioC 0.69 Psyr_4633 SpoVR low > 86
Erwinia tracheiphila SCR3 0.30 LU632_RS09140 bioC malonyl-ACP O-methyltransferase BioC 0.76 LU632_RS13075 SpoVR family protein — —
Erwinia tracheiphila HP pepo 2.2 0.30 IJEDHG_19575 bioC malonyl-ACP O-methyltransferase BioC 0.76 IJEDHG_22530 spoVR SpoVR family protein — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_4684 biotin synthesis protein BioC 0.69 Psyr_4633 SpoVR low > 86
Pseudomonas putida KT2440 0.30 PP_0365 Malonyl-[acyl-carrier protein] O-methyltransferase 0.66 PP_0395 putative type IV piliation protein low > 96
Pseudomonas sp. S08-1 0.30 OH686_10340 malonyl-acyl carrier protein O-methyltransferase BioC 0.68 OH686_15010 SpoVR-like protein low > 80
Pseudomonas sp. DMC3 0.29 GFF73 Malonyl-[acyl-carrier protein] O-methyltransferase 0.68 GFF43 hypothetical protein low > 89
Erwinia amylovora T8 0.29 OLJFJH_16750 malonyl-ACP O-methyltransferase BioC 0.75 OLJFJH_13155 SpoVR family protein low > 58
Pseudomonas sp. RS175 0.29 PFR28_04100 Malonyl-[acyl-carrier protein] O-methyltransferase 0.69 PFR28_04070 hypothetical protein low > 88
Rahnella sp. WP5 0.29 EX31_RS23705 malonyl-ACP O-methyltransferase BioC 0.76 EX31_RS10500 SpoVR family protein low > 89
Pseudomonas segetis P6 0.29 ACVTMO_RS03775 bioC malonyl-ACP O-methyltransferase BioC 0.67 ACVTMO_RS04325 SpoVR family protein low > 75
Enterobacter asburiae PDN3 0.29 EX28DRAFT_2214 malonyl-acyl carrier protein O-methyltransferase BioC 0.76 EX28DRAFT_0765 Uncharacterized conserved protein low > 76
Klebsiella michiganensis M5al 0.29 BWI76_RS08770 malonyl-ACP O-methyltransferase BioC 0.77 BWI76_RS17740 SpoVR family protein low > 92
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_07510 malonyl-[acyl-carrier protein] O-methyltransferase BioC 0.68 AO353_07345 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 101
Pseudomonas sp. BP01 0.29 JOY50_RS17945 bioC malonyl-ACP O-methyltransferase BioC 0.66 JOY50_RS18110 SpoVR family protein low > 84
Pseudomonas sp. SVBP6 0.29 COO64_RS22710 bioC malonyl-ACP O-methyltransferase BioC 0.67 COO64_RS22540 SpoVR family protein low > 93
Pseudomonas orientalis W4I3 0.28 QF045_RS00400 malonyl-ACP O-methyltransferase BioC 0.68 QF045_RS00240 SpoVR family protein low > 93
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_2490 Biotin synthesis protein BioC 0.68 Pf1N1B4_2521 FIG004684: SpoVR-like protein low > 87
Pseudomonas simiae WCS417 0.28 PS417_25990 malonyl-CoA O-methyltransferase 0.68 PS417_25840 SpoVR family protein low > 88
Pseudomonas aeruginosa MRSN321 0.28 DY961_RS22520 bioC;go_function=malonyl-CoA malonyl-ACP O-methyltransferase BioC 0.67 DY961_RS22955 SpoVR family protein — —
Pseudomonas aeruginosa PUPa3 0.28 DQ20_RS36810 bioC;go_function=malonyl-CoA malonyl-ACP O-methyltransferase BioC 0.67 DQ20_RS36390 SpoVR family protein low > 101
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS27635 malonyl-ACP O-methyltransferase BioC 0.68 PFLU_RS27495 SpoVR family protein low > 109
Pseudomonas fluorescens SBW25 0.28 PFLU_RS27635 malonyl-ACP O-methyltransferase BioC 0.68 PFLU_RS27495 SpoVR family protein low > 109
Pseudomonas lactucae CFBP13502 0.28 GEMAOFIL_05319 Malonyl-[acyl-carrier protein] O-methyltransferase 0.68 GEMAOFIL_05288 hypothetical protein low > 96
Pseudomonas aeruginosa PA14 0.28 IKLFDK_22920 malonyl-ACP O-methyltransferase BioC 0.67 IKLFDK_22480 SpoVR family protein low > 98
Klebsiella pneumoniae MKP103 0.28 KDGMDA_17035 malonyl-ACP O-methyltransferase BioC 0.77 KDGMDA_25055 SpoVR family protein low > 95
Enterobacter sp. TBS_079 0.27 MPMX20_01405 Malonyl-[acyl-carrier protein] O-methyltransferase 0.76 MPMX20_02700 hypothetical protein low > 85
Marinobacter adhaerens HP15 0.25 HP15_2483 protein containing methyltransferase type 11 domain 0.67 HP15_2935 SpoVR family protein low > 73
Shewanella sp. ANA-3 0.20 Shewana3_2517 biotin biosynthesis protein BioC (RefSeq) 0.75 Shewana3_1636 SpoVR family protein (RefSeq) — —
Paraburkholderia sabiae LMG 24235 0.19 QEN71_RS01485 methyltransferase domain-containing protein 0.67 QEN71_RS07385 SpoVR family protein — —
Magnetospirillum magneticum AMB-1 0.19 AMB_RS08100 SAM-dependent methyltransferase 0.50 AMB_RS10895 SpoVR family protein — —
Shewanella amazonensis SB2B 0.19 Sama_1440 biotin synthesis protein BioC (RefSeq) 0.76 Sama_1923 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) — —
Shewanella oneidensis MR-1 0.19 SO2738 bioC biotin synthesis protein BioC (NCBI ptt file) 0.74 SO2884 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 76
Paraburkholderia bryophila 376MFSha3.1 0.18 H281DRAFT_01996 malonyl-CoA O-methyltransferase 0.67 H281DRAFT_05234 Stage V sporulation protein SpoVR/YcgB, involved in spore cortex formation — —
Burkholderia phytofirmans PsJN 0.17 BPHYT_RS02630 amidophosphoribosyltransferase 0.66 BPHYT_RS11180 SpoVR family protein — —
Ralstonia sp. UNC404CL21Col 0.16 ABZR87_RS06785 methyltransferase domain-containing protein 0.65 ABZR87_RS14210 SpoVR family protein — —
Azospirillum sp. SherDot2 0.16 MPMX19_02425 Malonyl-[acyl-carrier protein] O-methyltransferase 0.49 MPMX19_02155 hypothetical protein — —
Azospirillum brasilense Sp245 0.16 AZOBR_RS02900 SAM-dependent methyltransferase 0.51 AZOBR_RS12645 SpoVR family protein — —
Castellaniella sp019104865 MT123 0.13 ABCV34_RS14235 methyltransferase domain-containing protein 0.13 ABCV34_RS05550 SpoVR family protein — —

Not shown: 20 genomes with orthologs for CSW01_05655 only; 11 genomes with orthologs for CSW01_09390 only