Conservation of cofitness between CSW01_06360 and CSW01_08235 in Vibrio cholerae E7946 ATCC 55056

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06360 rhodanese domain-containing protein 1.0 CSW01_08235 DNA-binding response regulator 0.48 14
Shewanella loihica PV-4 0.70 Shew_1781 hypothetical protein (RefSeq) 0.47 Shew_2695 two component transcriptional regulator (RefSeq) low > 60
Shewanella sp. ANA-3 0.70 Shewana3_2261 hypothetical protein (RefSeq) 0.44 Shewana3_4025 two component transcriptional regulator (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.69 MIT1002_01995 putative rhodanese-related sulfurtransferase 0.53 MIT1002_01421 Transcriptional regulatory protein PhoP low > 70
Kangiella aquimarina DSM 16071 0.68 B158DRAFT_1382 Predicted sulfurtransferase 0.51 B158DRAFT_1560 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 40
Shewanella oneidensis MR-1 0.68 SO2290 rhodanese domain protein (NCBI ptt file) 0.46 SO4647 DNA-binding response regulator (NCBI ptt file) low > 76
Marinobacter adhaerens HP15 0.66 HP15_2899 rhodanese sulfurtransferase 0.43 HP15_2937 two component transcriptional regulator, winged helix family low > 73
Methylophilus sp. DMC18 0.61 GFF1197 hypothetical protein 0.41 GFF417 Transcriptional regulatory protein QseB low > 43
Pseudomonas sp. BP01 0.60 JOY50_RS16195 rhodanese-related sulfurtransferase 0.43 JOY50_RS10885 response regulator transcription factor low > 84
Pseudomonas putida KT2440 0.60 PP_1758 putative sulfurtransferase containing rhodanese-like domain 0.43 PP_2347 DNA-binding response regulator low > 96
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_02135 hypothetical protein 0.43 AO353_19775 transcriptional regulator low > 101
Pseudomonas sp. S08-1 0.59 OH686_21035 Rhodanese domain protein UPF0176 0.43 OH686_00055 Two-component system response regulator QseB low > 80
Pseudomonas lactucae CFBP13502 0.59 GEMAOFIL_04059 Thiosulfate sulfurtransferase GlpE 0.45 GEMAOFIL_02165 Transcriptional regulatory protein QseB low > 96
Pseudomonas fluorescens SBW25 0.58 PFLU_RS21155 rhodanese-related sulfurtransferase 0.45 PFLU_RS10435 response regulator transcription factor low > 109
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS21155 rhodanese-related sulfurtransferase 0.45 PFLU_RS10435 response regulator transcription factor low > 109
Pseudomonas orientalis W4I3 0.58 QF045_RS21115 rhodanese-related sulfurtransferase 0.45 QF045_RS12350 response regulator transcription factor low > 93
Pseudomonas simiae WCS417 0.58 PS417_19160 hypothetical protein 0.45 PS417_10270 transcriptional regulator low > 88
Pseudomonas segetis P6 0.58 MPMX49_02859 Thiosulfate sulfurtransferase GlpE 0.44 MPMX49_02578 Transcriptional regulatory protein QseB low > 75
Pseudomonas aeruginosa PUPa3 0.58 DQ20_RS44620 rhodanese-related sulfurtransferase 0.41 DQ20_RS34965 carR;inference=COORDINATES two-component system response regulator CarR low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_3658 Rhodanese-like protein 0.43 Psyr_3212 Response regulator receiver:Transcriptional regulatory protein, C-terminal low > 86
Pseudomonas aeruginosa MRSN321 0.58 DY961_RS08200 rhodanese-related sulfurtransferase 0.41 DY961_RS03930 carR;inference=COORDINATES two-component system response regulator CarR low > 100
Pseudomonas aeruginosa PA14 0.58 IKLFDK_03790 rhodanese-related sulfurtransferase 0.41 IKLFDK_13340 two-component system response regulator CarR low > 98
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_3658 Rhodanese-like protein 0.43 Psyr_3212 Response regulator receiver:Transcriptional regulatory protein, C-terminal low > 86
Rhizobium sp. OAE497 0.58 ABIE40_RS16740 rhodanese-related sulfurtransferase 0.54 ABIE40_RS05660 response regulator transcription factor low > 107
Pseudomonas stutzeri RCH2 0.56 Psest_2679 Predicted sulfurtransferase 0.44 Psest_3533 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 67
Sinorhizobium meliloti 1021 0.55 SMc03156 hypothetical protein 0.54 SMc00458 transcriptional regulator 0.45 33
Agrobacterium fabrum C58 0.54 Atu4491 hypothetical protein 0.54 Atu0970 two component response regulator — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.53 GFF4655 Rhodanese domain protein UPF0176, cyanobacterial/alphaproteobacterial subgroup 0.42 GFF700 Two-component system response regulator QseB low > 90
Sphingomonas koreensis DSMZ 15582 0.48 Ga0059261_3413 Predicted sulfurtransferase 0.57 Ga0059261_1369 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 68
Acinetobacter radioresistens SK82 0.47 MPMX26_00718 Thiosulfate sulfurtransferase GlpE 0.41 MPMX26_00655 Transcriptional regulatory protein QseB — —
Acinetobacter baumannii LAC-4 0.46 RR41_RS04010 rhodanese-related sulfurtransferase 0.40 RR41_RS06150 response regulator transcription factor low > 55
Caulobacter crescentus NA1000 Δfur 0.45 CCNA_01113 rhodanese-related sulfurtransferase 0.49 CCNA_02854 two-component response regulator low > 67
Caulobacter crescentus NA1000 0.45 CCNA_01113 rhodanese-related sulfurtransferase 0.49 CCNA_02854 two-component response regulator low > 66
Brevundimonas sp. GW460-12-10-14-LB2 0.45 A4249_RS05860 rhodanese-related sulfurtransferase 0.49 A4249_RS15665 response regulator transcription factor low > 48
Ralstonia sp. UNC404CL21Col 0.31 ABZR87_RS15510 sulfurtransferase 0.39 ABZR87_RS21725 heavy metal response regulator transcription factor low > 80
Ralstonia solanacearum IBSBF1503 0.30 RALBFv3_RS03625 sulfurtransferase 0.40 RALBFv3_RS09230 DNA-binding response regulator low > 76
Ralstonia solanacearum UW163 0.30 UW163_RS10045 sulfurtransferase 0.40 UW163_RS04360 DNA-binding response regulator — —
Ralstonia solanacearum PSI07 0.30 RPSI07_RS13605 sulfurtransferase 0.40 RPSI07_RS08050 DNA-binding response regulator low > 81
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS04645 rhodanese superfamily protein 0.40 RR42_RS20630 transcriptional regulator low > 128

Not shown: 16 genomes with orthologs for CSW01_06360 only; 20 genomes with orthologs for CSW01_08235 only