| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_12405 | | GTP diphosphokinase | 1.0 | CSW01_07785 | | ABC transporter substrate-binding protein | 0.46 | 9 |
| Dickeya dianthicola 67-19 | 0.67 | HGI48_RS17070 | | GTP diphosphokinase | 0.37 | HGI48_RS20650 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 71 |
| Dickeya dadantii 3937 | 0.67 | DDA3937_RS17015 | | GTP diphosphokinase | 0.37 | DDA3937_RS00720 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 74 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.67 | GFF4837 | | 'GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)' transl_table=11 | 0.37 | GFF555 | | Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) | low | > 78 |
| Dickeya dianthicola ME23 | 0.67 | DZA65_RS18145 | | GTP diphosphokinase | 0.37 | DZA65_RS21665 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 75 |
| Klebsiella pneumoniae MKP103 | 0.67 | KDGMDA_03335 | | GTP diphosphokinase | 0.38 | KDGMDA_07180 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 95 |
| Escherichia coli BW25113 | 0.67 | b2784 | relA | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | 0.37 | b3453 | ugpB | glycerol-3-phosphate transporter subunit (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.67 | ECD_02629 | | (p)ppGpp synthetase I/GTP pyrophosphokinase | 0.37 | ECD_03302 | | sn-glycerol-3-phosphate ABC transporter periplasmic binding protein | low | > 61 |
| Escherichia coli ECRC102 | 0.67 | NIAGMN_18020 | relA | GTP diphosphokinase | 0.37 | NIAGMN_14540 | ugpB | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 80 |
| Escherichia coli ECRC62 | 0.67 | BNILDI_10630 | relA | GTP diphosphokinase | 0.37 | BNILDI_02945 | ugpB | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.67 | OHPLBJKB_00947 | | GTP pyrophosphokinase | 0.37 | OHPLBJKB_00250 | | sn-glycerol-3-phosphate-binding periplasmic protein UgpB | low | > 74 |
| Escherichia coli ECRC99 | 0.67 | KEDOAH_07880 | relA | GTP diphosphokinase | 0.37 | KEDOAH_11370 | ugpB | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | — | — |
| Escherichia coli ECOR38 | 0.67 | HEPCGN_19500 | relA | GTP diphosphokinase | 0.37 | HEPCGN_10875 | ugpB | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 88 |
| Escherichia coli ECOR27 | 0.67 | NOLOHH_12125 | relA | GTP diphosphokinase | 0.37 | NOLOHH_08560 | ugpB | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 76 |
| Escherichia coli ECRC100 | 0.67 | OKFHMN_20250 | relA | GTP diphosphokinase | 0.37 | OKFHMN_16770 | ugpB | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 79 |
| Escherichia coli ECRC101 | 0.67 | MCAODC_10775 | relA | GTP diphosphokinase | 0.37 | MCAODC_07300 | ugpB | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 87 |
| Escherichia coli ECRC98 | 0.67 | JDDGAC_23915 | relA | GTP diphosphokinase | 0.37 | JDDGAC_20400 | ugpB | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 87 |
| Escherichia coli Nissle 1917 | 0.67 | ECOLIN_RS15515 | | GTP diphosphokinase | 0.37 | ECOLIN_RS19745 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 55 |
| Escherichia fergusonii Becca | 0.67 | EFB2_01133 | | GTP pyrophosphokinase | 0.37 | EFB2_00369 | | sn-glycerol-3-phosphate-binding periplasmic protein UgpB | low | > 86 |
| Klebsiella michiganensis M5al | 0.67 | BWI76_RS22805 | | GTP diphosphokinase | 0.37 | BWI76_RS26305 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein | low | > 92 |
| Enterobacter sp. TBS_079 | 0.66 | MPMX20_03653 | | GTP pyrophosphokinase | 0.37 | MPMX20_04329 | | sn-glycerol-3-phosphate-binding periplasmic protein UgpB | low | > 85 |
| Pantoea sp. MT58 | 0.66 | IAI47_04120 | | GTP diphosphokinase | 0.38 | IAI47_01590 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 76 |
| Enterobacter asburiae PDN3 | 0.66 | EX28DRAFT_2864 | | (p)ppGpp synthetase, RelA/SpoT family | 0.37 | EX28DRAFT_4285 | | ABC-type sugar transport system, periplasmic component | low | > 76 |
| Erwinia amylovora T8 | 0.66 | OLJFJH_09245 | | GTP diphosphokinase | 0.38 | OLJFJH_04330 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 58 |
| Pantoea agglomerans CFBP13505 P0401 | 0.66 | PagCFBP13505_RS16850 | | GTP diphosphokinase | 0.38 | PagCFBP13505_RS18105 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 74 |
| Rahnella sp. WP5 | 0.66 | EX31_RS07955 | | GTP diphosphokinase | 0.37 | EX31_RS14760 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 89 |
| Pectobacterium carotovorum WPP14 | 0.66 | HER17_RS04115 | | GTP diphosphokinase | 0.37 | HER17_RS00610 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 75 |
| Serratia liquefaciens MT49 | 0.66 | IAI46_03600 | | GTP diphosphokinase | 0.37 | IAI46_00990 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 87 |
| Pseudomonas syringae pv. syringae B728a | 0.45 | Psyr_3695 | | RelA/SpoT protein | 0.18 | Psyr_4502 | | carbohydrate ABC transporter substrate-binding protein, CUT1 family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.45 | Psyr_3695 | | RelA/SpoT protein | 0.18 | Psyr_4502 | | carbohydrate ABC transporter substrate-binding protein, CUT1 family | low | > 86 |
| Ralstonia solanacearum GMI1000 | 0.38 | RS_RS07930 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.40 | RS_RS06335 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.38 | ABZR87_RS13745 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.40 | ABZR87_RS11085 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.38 | RPSI07_RS15685 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.40 | RPSI07_RS17800 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 81 |
| Dechlorosoma suillum PS | 0.38 | Dsui_2816 | | (p)ppGpp synthetase, RelA/SpoT family | 0.13 | Dsui_3367 | | ABC-type sugar transport system, periplasmic component | low | > 51 |
| Ralstonia solanacearum IBSBF1503 | 0.38 | RALBFv3_RS01805 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.40 | RALBFv3_RS15555 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 76 |
| Ralstonia solanacearum UW163 | 0.38 | UW163_RS15115 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.40 | UW163_RS13015 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.37 | QEN71_RS05265 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.37 | QEN71_RS27605 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | low | > 153 |
| Cupriavidus basilensis FW507-4G11 | 0.37 | RR42_RS06585 | | GTP pyrophosphokinase | 0.40 | RR42_RS12970 | | glycerol-3-phosphate ABC transporter substrate-binding protein | low | > 128 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.35 | H281DRAFT_04499 | | GTP pyrophosphokinase | 0.36 | H281DRAFT_05704 | | glycerol 3-phosphate-binding protein | low | > 103 |
| Herbaspirillum seropedicae SmR1 | 0.35 | HSERO_RS09855 | | GTP pyrophosphokinase | 0.40 | HSERO_RS18955 | | glycerol-3-phosphate ABC transporter substrate-binding protein | low | > 78 |
| Burkholderia phytofirmans PsJN | 0.35 | BPHYT_RS13655 | | GTP pyrophosphokinase | 0.37 | BPHYT_RS17455 | | glycerol-3-phosphate ABC transporter substrate-binding protein | low | > 109 |
| Acidovorax sp. GW101-3H11 | 0.34 | Ac3H11_362 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I | 0.31 | Ac3H11_4788 | | Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) | low | > 79 |
| Castellaniella sp019104865 MT123 | 0.34 | ABCV34_RS08440 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.38 | ABCV34_RS03605 | | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | 0.82 | 9 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.34 | GFF4925 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I | 0.34 | GFF1259 | | Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) | low | > 90 |
| Variovorax sp. SCN45 | 0.32 | GFF403 | | Inactive (p)ppGpp 3'-pyrophosphohydrolase domain / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I | 0.35 | GFF2537 | | Glycerol-3-phosphate ABC transporter, substrate-binding protein UgpB | low | > 127 |
Not shown: 46 genomes with orthologs for CSW01_12405 only; 13 genomes with orthologs for CSW01_07785 only