Conservation of cofitness between CSW01_17765 and CSW01_04510 in Vibrio cholerae E7946 ATCC 55056

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_17765 TIGR01666 family membrane protein 1.0 CSW01_04510 50S ribosomal protein L31 type B 0.47 11
Pseudomonas fluorescens SBW25 0.41 PFLU_RS28030 TIGR01666 family membrane protein 0.63 PFLU_RS05495 type B 50S ribosomal protein L31 low > 109
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS28030 TIGR01666 family membrane protein 0.63 PFLU_RS05495 type B 50S ribosomal protein L31 low > 109
Pseudomonas aeruginosa MRSN321 0.40 DY961_RS22260 yccS;go_component=membrane|0016020||IEA;inference=COORDINATES YccS family putative transporter 0.61 DY961_RS14975 type B 50S ribosomal protein L31 low > 100
Pseudomonas aeruginosa PA14 0.40 IKLFDK_23160 TIGR01666 family membrane protein 0.61 IKLFDK_18385 type B 50S ribosomal protein L31 low > 98
Pseudomonas aeruginosa PUPa3 0.40 DQ20_RS37060 yccS;go_component=membrane|0016020||IEA;inference=COORDINATES YccS family putative transporter 0.61 DQ20_RS42155 type B 50S ribosomal protein L31 low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_0514 Intergral membrane protein, YccS:Integral membrane protein, YccS/YhfK 0.59 Psyr_3920 LSU ribosomal protein L31P low > 86
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_0514 Intergral membrane protein, YccS:Integral membrane protein, YccS/YhfK 0.59 Psyr_3920 LSU ribosomal protein L31P low > 86
Serratia liquefaciens MT49 0.39 IAI46_08890 TIGR01666 family membrane protein 0.65 IAI46_05180 type B 50S ribosomal protein L31 low > 87
Pseudomonas sp. BP01 0.39 JOY50_RS09925 yccS YccS family putative transporter 0.55 JOY50_RS14120 type B 50S ribosomal protein L31
Pectobacterium carotovorum WPP14 0.38 HER17_RS08435 YccS family putative transporter 0.68 HER17_RS15745 type B 50S ribosomal protein L31 low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF3251 Putative efflux (PET) family inner membrane protein YccS 0.59 GFF4373 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent low > 78
Enterobacter asburiae PDN3 0.38 EX28DRAFT_1983 TIGR01666 family membrane protein 0.64 EX28DRAFT_2504 ribosomal protein L31 low > 76
Enterobacter sp. TBS_079 0.38 MPMX20_01610 Inner membrane protein YccS 0.64 MPMX20_01056 50S ribosomal protein L31 type B low > 85
Rahnella sp. WP5 0.37 EX31_RS18025 TIGR01666 family membrane protein 0.66 EX31_RS22465 type B 50S ribosomal protein L31 low > 89
Dickeya dadantii 3937 0.37 DDA3937_RS15230 TIGR01666 family membrane protein 0.64 DDA3937_RS05730 type B 50S ribosomal protein L31 0.64 8
Klebsiella pneumoniae MKP103 0.37 KDGMDA_18215 TIGR01666 family membrane protein 0.63 KDGMDA_14795 type B 50S ribosomal protein L31 low > 95
Escherichia coli ECRC62 0.37 BNILDI_19940 yccS Inner membrane protein YccS 0.69 BNILDI_00085 rpmE2-1 type B 50S ribosomal protein L31 low > 75
Escherichia coli BL21 0.37 ECD_00964 putative transporter, FUSC superfamily inner membrane protein 0.69 ECD_00255 50S ribosomal protein L31 type B; alternative zinc-limitation L31 protein low > 61
Escherichia fergusonii Becca 0.37 EFB2_03111 Inner membrane protein YccS 0.69 EFB2_03748 50S ribosomal protein L31 type B low > 86
Escherichia coli ECRC99 0.37 KEDOAH_22515 yccS Inner membrane protein YccS 0.69 KEDOAH_18760 rpmE2-1 type B 50S ribosomal protein L31
Escherichia coli ECRC102 0.37 NIAGMN_02940 yccS Inner membrane protein YccS 0.69 NIAGMN_07245 rpmE2-1 type B 50S ribosomal protein L31 low > 80
Escherichia coli ECRC100 0.37 OKFHMN_05220 yccS Inner membrane protein YccS 0.69 OKFHMN_09190 rpmE2-1 type B 50S ribosomal protein L31 low > 79
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_02706 Inner membrane protein YccS 0.69 OHPLBJKB_03385 50S ribosomal protein L31 type B low > 74
Escherichia coli BW25113 0.37 b0960 b0960 orf, hypothetical protein (VIMSS) 0.69 b0296 ykgM 50S ribosomal protein L31 (NCBI) low > 76
Escherichia coli ECRC101 0.37 MCAODC_24610 yccS Inner membrane protein YccS 0.69 MCAODC_28405 rpmE2-1 type B 50S ribosomal protein L31 low > 87
Escherichia coli ECOR38 0.37 HEPCGN_23300 yccS Inner membrane protein YccS 0.69 HEPCGN_07710 rpmE2-1 type B 50S ribosomal protein L31 low > 88
Escherichia coli ECRC98 0.37 JDDGAC_08830 yccS Inner membrane protein YccS 0.69 JDDGAC_12830 rpmE2-1 type B 50S ribosomal protein L31 low > 87
Escherichia coli Nissle 1917 0.37 ECOLIN_RS05045 YccS family putative transporter 0.69 ECOLIN_RS01925 type B 50S ribosomal protein L31
Klebsiella michiganensis M5al 0.37 BWI76_RS09985 membrane protein 0.61 BWI76_RS06735 50S ribosomal protein L31 low > 92
Escherichia coli ECOR27 0.37 NOLOHH_21775 yccS Inner membrane protein YccS 0.69 NOLOHH_01965 rpmE2-1 type B 50S ribosomal protein L31 low > 76
Dickeya dianthicola ME23 0.37 DZA65_RS16130 TIGR01666 family membrane protein 0.64 DZA65_RS06110 type B 50S ribosomal protein L31 low > 75
Dickeya dianthicola 67-19 0.37 HGI48_RS15305 TIGR01666 family membrane protein 0.64 HGI48_RS05785 type B 50S ribosomal protein L31 low > 71
Erwinia amylovora T8 0.37 OLJFJH_15920 TIGR01666 family membrane protein 0.54 OLJFJH_17860 type B 50S ribosomal protein L31 low > 58
Pantoea agglomerans CFBP13505 P0401 0.35 PagCFBP13505_RS04700 TIGR01666 family membrane protein 0.62 PagCFBP13505_RS10675 type B 50S ribosomal protein L31 low > 74
Pantoea sp. MT58 0.35 IAI47_12630 TIGR01666 family membrane protein 0.63 IAI47_14520 type B 50S ribosomal protein L31 low > 76
Xanthomonas campestris pv. campestris strain 8004 0.34 Xcc-8004.656.1 FIG01209718: hypothetical protein 0.48 Xcc-8004.1202.1 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent
Acinetobacter radioresistens SK82 0.33 MPMX26_00618 Inner membrane protein YccS 0.64 MPMX26_00304 50S ribosomal protein L31 type B low > 36
Acinetobacter baumannii LAC-4 0.33 RR41_RS03505 YccS family putative transporter 0.61 RR41_RS17045 type B 50S ribosomal protein L31 low > 55
Variovorax sp. SCN45 0.31 GFF2446 FIG00956403: hypothetical protein 0.37 GFF1101 LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS20530 YccS family putative transporter 0.50 ABZR86_RS11830 type B 50S ribosomal protein L31
Echinicola vietnamensis KMM 6221, DSM 17526 0.15 Echvi_1920 Predicted membrane protein 0.52 Echvi_1739 ribosomal protein L31
Pedobacter sp. GW460-11-11-14-LB5 0.14 CA265_RS09455 FUSC family protein 0.42 CA265_RS10805 50S ribosomal protein L31
Mucilaginibacter yixingensis YX-36 DSM 26809 0.13 ABZR88_RS09460 FUSC family membrane protein 0.43 ABZR88_RS14465 type B 50S ribosomal protein L31
Cellulophaga baltica 18 0.10 M666_RS00450 FUSC family membrane protein 0.44 M666_RS18195 type B 50S ribosomal protein L31
Herbaspirillum seropedicae SmR1 0.10 HSERO_RS10560 membrane protein 0.57 HSERO_RS04310 50S ribosomal protein L31
Ralstonia solanacearum PSI07 0.08 RPSI07_RS10705 FUSC family protein 0.52 RPSI07_RS18265 50S ribosomal protein L31 type B
Ralstonia solanacearum GMI1000 0.08 RS_RS14475 FUSC family protein 0.52 RS_RS05925 50S ribosomal protein L31 type B
Ralstonia solanacearum UW163 0.08 UW163_RS07100 FUSC family protein 0.52 UW163_RS12580 50S ribosomal protein L31 type B
Ralstonia solanacearum IBSBF1503 0.08 RALBFv3_RS06525 FUSC family protein 0.52 RALBFv3_RS15110 50S ribosomal protein L31 type B
Ralstonia sp. UNC404CL21Col 0.07 ABZR87_RS02175 FUSC family protein 0.55 ABZR87_RS10740 type B 50S ribosomal protein L31

Not shown: 15 genomes with orthologs for CSW01_17765 only; 24 genomes with orthologs for CSW01_04510 only