Conservation of cofitness between CSW01_00270 and CSW01_03430 in Vibrio cholerae E7946 ATCC 55056

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00270 threonylcarbamoyl-AMP synthase 1.0 CSW01_03430 U32 family peptidase 0.45 12
Enterobacter sp. TBS_079 0.61 MPMX20_04190 Threonylcarbamoyl-AMP synthase 0.64 MPMX20_04063 hypothetical protein — —
Enterobacter asburiae PDN3 0.60 EX28DRAFT_0045 Putative translation factor (SUA5) 0.65 EX28DRAFT_3208 Collagenase and related proteases — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF2396 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA 0.68 GFF1509 FIG139928: Putative protease — —
Klebsiella michiganensis M5al 0.58 BWI76_RS25650 L-threonylcarbamoyladenylate synthase type 1 TsaC 0.65 BWI76_RS24975 U32 family peptidase — —
Klebsiella pneumoniae MKP103 0.58 KDGMDA_06520 L-threonylcarbamoyladenylate synthase type 1 TsaC 0.66 KDGMDA_05845 U32 family peptidase — —
Dickeya dianthicola 67-19 0.58 HGI48_RS19195 L-threonylcarbamoyladenylate synthase type 1 TsaC 0.67 HGI48_RS03285 U32 family peptidase — —
Dickeya dadantii 3937 0.58 DDA3937_RS19105 L-threonylcarbamoyladenylate synthase type 1 TsaC 0.67 DDA3937_RS03110 U32 family peptidase — —
Escherichia coli ECOR38 0.58 HEPCGN_16380 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC 0.67 HEPCGN_17045 rlhA U32 family peptidase — —
Dickeya dianthicola ME23 0.57 DZA65_RS20320 L-threonylcarbamoyladenylate synthase type 1 TsaC 0.66 DZA65_RS03280 U32 family peptidase — —
Escherichia coli ECRC62 0.57 BNILDI_02170 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC 0.67 BNILDI_01560 rlhA U32 family peptidase — —
Escherichia coli ECRC100 0.57 OKFHMN_17560 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC 0.67 OKFHMN_18170 rlhA U32 family peptidase — —
Escherichia coli ECRC98 0.57 JDDGAC_21180 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC 0.67 JDDGAC_21795 rlhA U32 family peptidase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_00421 Threonylcarbamoyl-AMP synthase 0.67 OHPLBJKB_00541 hypothetical protein — —
Escherichia fergusonii Becca 0.57 EFB2_00541 Threonylcarbamoyl-AMP synthase 0.67 EFB2_00664 hypothetical protein — —
Escherichia coli ECRC102 0.57 NIAGMN_15320 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC 0.67 NIAGMN_15930 rlhA U32 family peptidase — —
Escherichia coli ECOR27 0.57 NOLOHH_09350 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC 0.66 NOLOHH_09970 rlhA U32 family peptidase — —
Escherichia coli BL21 0.57 ECD_03133 tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein, threonine-dependent ADP-forming ATPase 0.67 ECD_03026 U32 peptidase family protein — —
Escherichia coli BW25113 0.57 b3282 yrdC predicted ribosome maturation factor (NCBI) 0.67 b3159 yhbV orf, hypothetical protein (VIMSS) — —
Escherichia coli ECRC101 0.57 MCAODC_08080 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC 0.67 MCAODC_08690 rlhA U32 family peptidase — —
Escherichia coli ECRC99 0.57 KEDOAH_10590 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC 0.67 KEDOAH_09980 rlhA U32 family peptidase — —
Escherichia coli Nissle 1917 0.57 ECOLIN_RS18845 L-threonylcarbamoyladenylate synthase type 1 TsaC 0.67 ECOLIN_RS18145 U32 family peptidase — —
Rahnella sp. WP5 0.56 EX31_RS15955 L-threonylcarbamoyladenylate synthase type 1 TsaC 0.68 EX31_RS08485 U32 family peptidase — —
Erwinia tracheiphila SCR3 0.55 LU632_RS22450 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC 0.60 LU632_RS21010 U32 family peptidase — —
Erwinia tracheiphila HP pepo 2.2 0.55 IJEDHG_12500 tsaC L-threonylcarbamoyladenylate synthase type 1 TsaC 0.60 IJEDHG_14000 U32 family peptidase — —
Pectobacterium carotovorum WPP14 0.55 HER17_RS02245 L-threonylcarbamoyladenylate synthase type 1 TsaC 0.65 HER17_RS18165 U32 family peptidase — —
Serratia liquefaciens MT49 0.54 IAI46_23245 L-threonylcarbamoyladenylate synthase type 1 TsaC 0.66 IAI46_02010 U32 family peptidase — —
Pantoea agglomerans CFBP13505 P0401 0.53 PagCFBP13505_RS22555 L-threonylcarbamoyladenylate synthase type 1 TsaC 0.63 PagCFBP13505_RS09065 U32 family peptidase — —
Pantoea sp. MT58 0.52 IAI47_02310 L-threonylcarbamoyladenylate synthase type 1 TsaC 0.63 IAI47_16970 U32 family peptidase — —
Shewanella sp. ANA-3 0.48 Shewana3_0040 translation factor SUA5 (RefSeq) 0.44 Shewana3_1064 peptidase U32 (RefSeq) — —
Shewanella oneidensis MR-1 0.48 SO0037 Sua5/YciO/YrdC/YwlC family protein (NCBI ptt file) 0.44 SO1248 hypothetical peptidase (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.48 Sama_0049 SUA5/YciO/YrdC-like protein (RefSeq) 0.41 Sama_0997 peptidase U32 (RefSeq) low > 62
Shewanella loihica PV-4 0.46 Shew_3730 Sua5/YciO/YrdC/YwlC family protein (RefSeq) 0.46 Shew_2788 peptidase U32 (RefSeq) — —
Pseudomonas stutzeri RCH2 0.43 Psest_0026 Putative translation factor (SUA5) 0.44 Psest_0836 Collagenase and related proteases — —
Pseudomonas sp. SVBP6 0.41 COO64_RS02235 L-threonylcarbamoyladenylate synthase 0.47 COO64_RS14195 U32 family peptidase — —
Pseudomonas aeruginosa PA14 0.41 IKLFDK_25450 Threonylcarbamoyl-AMP synthase 0.44 IKLFDK_20170 U32 family peptidase — —
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_4126 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA 0.45 Pf6N2E2_722 FIG139928: Putative protease — —
Pseudomonas sp. RS175 0.39 PFR28_04658 Threonylcarbamoyl-AMP synthase 0.46 PFR28_02213 hypothetical protein — —
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_10655 tRNA threonylcarbamoyladenosine biosynthesis protein RimN 0.43 AO353_22055 protease — —
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_11300 tRNA threonylcarbamoyladenosine biosynthesis protein RimN 0.45 AO356_25165 protease — —
Pseudomonas lactucae CFBP13502 0.38 GEMAOFIL_00228 Threonylcarbamoyl-AMP synthase 0.47 GEMAOFIL_03432 hypothetical protein — —
Pseudomonas simiae WCS417 0.38 PS417_00110 tRNA threonylcarbamoyladenosine biosynthesis protein RimN 0.46 PS417_15750 protease — —
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_1909 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA 0.44 Pf1N1B4_5745 FIG139928: Putative protease — —
Kangiella aquimarina DSM 16071 0.36 B158DRAFT_0403 Putative translation factor (SUA5) 0.39 B158DRAFT_2374 Collagenase and related proteases low > 40

Not shown: 32 genomes with orthologs for CSW01_00270 only; 11 genomes with orthologs for CSW01_03430 only