Conservation of cofitness between CSW01_15330 and CSW01_02830 in Vibrio cholerae E7946 ATCC 55056

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_15330 glycine dehydrogenase (decarboxylating) 1.0 CSW01_02830 murein hydrolase activator NlpD 0.71 12
Alteromonas macleodii MIT1002 0.63 MIT1002_02971 Glycine dehydrogenase [decarboxylating] 0.37 MIT1002_00626 Murein hydrolase activator NlpD precursor low > 70
Pseudomonas sp. S08-1 0.60 OH686_11165 glycine dehydrogenase 0.29 OH686_18180 Murein hydrolase activator NlpD low > 80
Dechlorosoma suillum PS 0.60 Dsui_2737 glycine dehydrogenase, decarboxylating 0.30 Dsui_1970 metalloendopeptidase-like membrane protein low > 51
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_0545 glycine dehydrogenase (decarboxylating) 0.29 B158DRAFT_2299 Membrane proteins related to metalloendopeptidases — —
Pseudomonas sp. BP01 0.59 JOY50_RS22405 gcvP aminomethyl-transferring glycine dehydrogenase 0.28 JOY50_RS23750 peptidoglycan DD-metalloendopeptidase family protein — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF3003 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.39 GFF4789 Lipoprotein NlpD low > 78
Shewanella loihica PV-4 0.59 Shew_3062 glycine dehydrogenase (RefSeq) 0.35 Shew_1212 peptidase M23B (RefSeq) low > 60
Shewanella sp. ANA-3 0.58 Shewana3_3499 glycine dehydrogenase (RefSeq) 0.36 Shewana3_1123 peptidase M23B (RefSeq) low > 73
Shewanella oneidensis MR-1 0.58 SO0781 gcvP glycine cleavage system P protein (NCBI ptt file) 0.34 SO3433 nlpD lipoprotein NlpD (NCBI ptt file) low > 76
Pseudomonas putida KT2440 0.58 PP_5192 glycine dehydrogenase 0.28 PP_1622 metallopeptidase, M23B subfamily — —
Pseudomonas sp. DMC3 0.58 GFF308 Glycine dehydrogenase (decarboxylating) 0.29 GFF2083 Murein hydrolase activator NlpD — —
Pseudomonas fluorescens FW300-N2E3 0.58 AO353_08720 glycine dehydrogenase 0.29 AO353_16610 peptigoglycan-binding protein LysM — —
Pseudomonas sp. SVBP6 0.58 COO64_RS00950 gcvP aminomethyl-transferring glycine dehydrogenase 0.30 COO64_RS19790 peptidoglycan DD-metalloendopeptidase family protein low > 93
Serratia liquefaciens MT49 0.58 IAI46_20850 aminomethyl-transferring glycine dehydrogenase 0.38 IAI46_03785 murein hydrolase activator NlpD low > 86
Shewanella amazonensis SB2B 0.58 Sama_2719 glycine dehydrogenase (RefSeq) 0.33 Sama_1043 lipoprotein NlpD (RefSeq) low > 62
Rahnella sp. WP5 0.58 EX31_RS21520 aminomethyl-transferring glycine dehydrogenase 0.41 EX31_RS07830 murein hydrolase activator NlpD low > 89
Dyella japonica UNC79MFTsu3.2 0.57 ABZR86_RS08305 aminomethyl-transferring glycine dehydrogenase 0.21 ABZR86_RS06580 peptidoglycan DD-metalloendopeptidase family protein low > 74
Pseudomonas aeruginosa PA14 0.57 IKLFDK_27405 aminomethyl-transferring glycine dehydrogenase 0.30 IKLFDK_18500 Lipo NlpD/LppB-like protein low > 100
Pseudomonas fluorescens SBW25 0.57 PFLU_RS24000 aminomethyl-transferring glycine dehydrogenase 0.29 PFLU_RS06425 peptidoglycan DD-metalloendopeptidase family protein — —
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS24000 aminomethyl-transferring glycine dehydrogenase 0.29 PFLU_RS06425 peptidoglycan DD-metalloendopeptidase family protein — —
Pseudomonas lactucae CFBP13502 0.57 GEMAOFIL_04608 Glycine dehydrogenase (decarboxylating) 0.29 GEMAOFIL_01442 hypothetical protein — —
Rhodanobacter denitrificans MT42 0.56 LRK55_RS00260 aminomethyl-transferring glycine dehydrogenase 0.21 LRK55_RS16390 peptidoglycan DD-metalloendopeptidase family protein — —
Variovorax sp. SCN45 0.56 GFF6478 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.27 GFF2843 Murein hydrolase activator NlpD low > 127
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS20070 glycine dehydrogenase 0.22 RR42_RS13190 outer membrane metallopeptidase lipoprotein nlpD low > 128
Rhodanobacter denitrificans FW104-10B01 0.56 LRK54_RS00520 aminomethyl-transferring glycine dehydrogenase 0.21 LRK54_RS16665 peptidoglycan DD-metalloendopeptidase family protein low > 59
Variovorax sp. OAS795 0.56 ABID97_RS19655 aminomethyl-transferring glycine dehydrogenase 0.27 ABID97_RS10725 peptidoglycan DD-metalloendopeptidase family protein low > 91
Rhodanobacter sp. FW510-T8 0.55 OKGIIK_06740 gcvP2 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain 0.21 OKGIIK_08100 Peptidase M23 0.75 51
Castellaniella sp019104865 MT123 0.54 ABCV34_RS08835 aminomethyl-transferring glycine dehydrogenase 0.22 ABCV34_RS03040 peptidoglycan DD-metalloendopeptidase family protein — —
Rhodanobacter sp000427505 FW510-R12 0.54 LRK53_RS09610 aminomethyl-transferring glycine dehydrogenase 0.20 LRK53_RS12255 peptidoglycan DD-metalloendopeptidase family protein — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.54 GFF5215 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.24 GFF3881 Lipoprotein NlpD low > 90
Acidovorax sp. GW101-3H11 0.54 Ac3H11_167 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.23 Ac3H11_1786 Lipoprotein NlpD — —

Not shown: 67 genomes with orthologs for CSW01_15330 only; 3 genomes with orthologs for CSW01_02830 only