| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_17170 | | ABC transporter ATP-binding protein | 1.0 | CSW01_01710 | | Rsd/AlgQ family anti-sigma factor | 0.47 | 17 |
| Pectobacterium carotovorum WPP14 | 0.60 | HER17_RS12935 | | microcin C ABC transporter ATP-binding protein YejF | 0.27 | HER17_RS20375 | | Rsd/AlgQ family anti-sigma factor | low | > 75 |
| Klebsiella pneumoniae MKP103 | 0.60 | KDGMDA_26735 | | microcin C ABC transporter ATP-binding protein YejF | 0.29 | KDGMDA_10045 | | sigma D regulator | low | > 95 |
| Escherichia coli ECRC62 | 0.60 | BNILDI_13870 | yejF | microcin C ABC transporter ATP-binding protein YejF | 0.29 | BNILDI_06010 | rsd | sigma D regulator | low | > 75 |
| Escherichia fergusonii Becca | 0.60 | EFB2_01676 | | putative ABC transporter ATP-binding protein YejF | 0.29 | EFB2_04616 | | Regulator of sigma D | low | > 86 |
| Escherichia coli ECOR38 | 0.60 | HEPCGN_22640 | yejF | microcin C ABC transporter ATP-binding protein YejF | 0.29 | HEPCGN_12005 | rsd | sigma D regulator | low | > 88 |
| Escherichia coli ECOR27 | 0.60 | NOLOHH_14950 | yejF | microcin C ABC transporter ATP-binding protein YejF | 0.29 | NOLOHH_05515 | rsd | sigma D regulator | low | > 76 |
| Escherichia coli BW25113 | 0.60 | b2180 | yejF | fused predicted oligopeptide transporter subunits of ABC superfamilly: ATP-binding components (NCBI) | 0.29 | b3995 | rsd | stationary phase protein, binds sigma 70 RNA polymerase subunit (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.60 | ECD_02110 | | microcin C ABC transporter ATPase | 0.29 | ECD_03872 | | stationary phase protein, binds sigma 70 RNA polymerase subunit | low | > 61 |
| Escherichia coli Nissle 1917 | 0.60 | ECOLIN_RS12745 | | microcin C ABC transporter ATP-binding protein YejF | 0.29 | ECOLIN_RS23045 | | sigma D regulator | low | > 55 |
| Pseudomonas sp. RS175 | 0.60 | PFR28_01546 | | putative ABC transporter ATP-binding protein YejF | 0.23 | PFR28_04361 | | Regulator of sigma D | low | > 88 |
| Klebsiella michiganensis M5al | 0.60 | BWI76_RS19795 | | microcin C ABC transporter ATP-binding protein YejF | 0.28 | BWI76_RS01560 | | Rsd/AlgQ family anti-sigma factor | low | > 92 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.60 | OHPLBJKB_01529 | | putative ABC transporter ATP-binding protein YejF | 0.29 | OHPLBJKB_04055 | | Regulator of sigma D | low | > 74 |
| Escherichia coli ECRC100 | 0.59 | OKFHMN_23375 | yejF | microcin C ABC transporter ATP-binding protein YejF | 0.29 | OKFHMN_13370 | rsd | sigma D regulator | low | > 79 |
| Escherichia coli ECRC101 | 0.59 | MCAODC_14425 | yejF | microcin C ABC transporter ATP-binding protein YejF | 0.29 | MCAODC_03870 | rsd | sigma D regulator | low | > 87 |
| Escherichia coli ECRC102 | 0.59 | NIAGMN_21140 | yejF | microcin C ABC transporter ATP-binding protein YejF | 0.29 | NIAGMN_11120 | rsd | sigma D regulator | low | > 80 |
| Escherichia coli ECRC99 | 0.59 | KEDOAH_04810 | yejF | microcin C ABC transporter ATP-binding protein YejF | 0.29 | KEDOAH_14790 | rsd | sigma D regulator | — | — |
| Escherichia coli ECRC98 | 0.59 | JDDGAC_27335 | yejF | microcin C ABC transporter ATP-binding protein YejF | 0.29 | JDDGAC_16995 | rsd | sigma D regulator | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.59 | Pf6N2E2_581 | | Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) | 0.24 | Pf6N2E2_4435 | | Regulator of sigma D | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.59 | AO356_24450 | | microcin ABC transporter ATP-binding protein | 0.24 | AO356_12810 | | transcriptional regulator | low | > 104 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.59 | Psyr_1755 | | ABC transporter | 0.24 | Psyr_0056 | | Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.59 | Psyr_1755 | | ABC transporter | 0.24 | Psyr_0056 | | Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ | low | > 86 |
| Pseudomonas sp. BP01 | 0.59 | JOY50_RS07120 | | ABC transporter ATP-binding protein | 0.22 | JOY50_RS18725 | | Rsd/AlgQ family anti-sigma factor | low | > 84 |
| Pseudomonas segetis P6 | 0.59 | MPMX49_02816 | | putative ABC transporter ATP-binding protein YejF | 0.27 | MPMX49_04516 | | Regulator of sigma D | low | > 75 |
| Pseudomonas fluorescens FW300-N2E3 | 0.59 | AO353_23460 | | microcin ABC transporter ATP-binding protein | 0.22 | AO353_08965 | | transcriptional regulator | low | > 101 |
| Pseudomonas stutzeri RCH2 | 0.59 | Psest_2064 | | ABC-type uncharacterized transport system, duplicated ATPase component | 0.25 | Psest_3743 | | Regulator of sigma D | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.59 | GFF3756 | | Putative ABC transporter ATP-binding protein | 0.29 | GFF4197 | | Regulator of sigma D | low | > 78 |
| Pseudomonas sp. SVBP6 | 0.59 | COO64_RS19220 | | ABC transporter ATP-binding protein | 0.20 | COO64_RS01170 | | Rsd/AlgQ family anti-sigma factor | low | > 93 |
| Pseudomonas sp. S08-1 | 0.59 | OH686_03615 | | ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) | 0.26 | OH686_13925 | | Alginate regulatory protein AlgQ, positive transcriptional regulator of AlgD | low | > 80 |
| Enterobacter asburiae PDN3 | 0.58 | EX28DRAFT_0381 | | ABC-type uncharacterized transport system, duplicated ATPase component | 0.27 | EX28DRAFT_4537 | | Regulator of sigma D | low | > 76 |
| Pseudomonas fluorescens GW456-L13 | 0.58 | PfGW456L13_3346 | | Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) | 0.23 | PfGW456L13_861 | | Regulator of sigma D | low | > 87 |
| Erwinia tracheiphila HP pepo 2.2 | 0.58 | IJEDHG_16050 | yejF | microcin C ABC transporter ATP-binding protein YejF | 0.25 | IJEDHG_10890 | rsd | sigma D regulator | low | > 61 |
| Erwinia tracheiphila SCR3 | 0.58 | LU632_RS17580 | yejF | microcin C ABC transporter ATP-binding protein YejF | 0.25 | LU632_RS00975 | | Rsd/AlgQ family anti-sigma factor | low | > 73 |
| Enterobacter sp. TBS_079 | 0.58 | MPMX20_03146 | | putative ABC transporter ATP-binding protein YejF | 0.29 | MPMX20_00218 | | Regulator of sigma D | low | > 85 |
| Pseudomonas aeruginosa MRSN321 | 0.58 | DY961_RS20765 | | ABC transporter ATP-binding protein | 0.26 | DY961_RS12155 | rsd;go_process=regulation | sigma D regulator | low | > 100 |
| Pseudomonas aeruginosa PUPa3 | 0.58 | DQ20_RS54845 | | ABC transporter ATP-binding protein | 0.26 | DQ20_RS49965 | rsd;go_process=regulation | sigma D regulator | low | > 101 |
| Pseudomonas aeruginosa PA14 | 0.58 | IKLFDK_08785 | | nickel import ATP-binding protein NikD | 0.26 | IKLFDK_27180 | | Alginate regulatory protein AlgQ | low | > 98 |
| Pseudomonas putida KT2440 | 0.58 | PP_4150 | | microcin C transporter - ATP binding subunit | 0.22 | PP_0191 | | Transcriptional regulatory protein AlgQ | low | > 96 |
| Dickeya dianthicola 67-19 | 0.57 | HGI48_RS09215 | | microcin C ABC transporter ATP-binding protein YejF | 0.20 | HGI48_RS01175 | | sigma D regulator | low | > 71 |
| Dickeya dianthicola ME23 | 0.57 | DZA65_RS09520 | | microcin C ABC transporter ATP-binding protein YejF | 0.21 | DZA65_RS01220 | | Rsd/AlgQ family anti-sigma factor | low | > 75 |
| Rahnella sp. WP5 | 0.57 | EX31_RS19145 | | microcin C ABC transporter ATP-binding protein YejF | 0.29 | EX31_RS16820 | | Rsd/AlgQ family anti-sigma factor | low | > 89 |
| Pseudomonas sp. DMC3 | 0.57 | GFF1016 | | putative ABC transporter ATP-binding protein YejF | 0.25 | GFF353 | | Regulator of sigma D | low | > 89 |
| Pantoea agglomerans CFBP13505 P0401 | 0.57 | PagCFBP13505_RS00685 | | microcin C ABC transporter ATP-binding protein YejF | 0.31 | PagCFBP13505_RS22615 | | Rsd/AlgQ family anti-sigma factor | low | > 74 |
| Dickeya dadantii 3937 | 0.57 | DDA3937_RS09175 | | microcin C ABC transporter ATP-binding protein YejF | 0.20 | DDA3937_RS01180 | | Rsd/AlgQ family anti-sigma factor | low | > 74 |
| Pseudomonas orientalis W4I3 | 0.56 | QF045_RS14725 | | ABC transporter ATP-binding protein | 0.21 | QF045_RS01865 | | sigma D regulator | low | > 93 |
| Erwinia amylovora T8 | 0.56 | OLJFJH_11725 | | microcin C ABC transporter ATP-binding protein YejF | 0.25 | OLJFJH_06745 | | sigma D regulator | low | > 58 |
| Pantoea sp. MT58 | 0.56 | IAI47_06600 | | microcin C ABC transporter ATP-binding protein YejF | 0.31 | IAI47_18080 | | Rsd/AlgQ family anti-sigma factor | low | > 76 |
| Pseudomonas simiae WCS417 | 0.56 | PS417_12190 | | microcin ABC transporter ATP-binding protein | 0.21 | PS417_27505 | | transcriptional regulator | low | > 88 |
| Pseudomonas lactucae CFBP13502 | 0.56 | GEMAOFIL_02683 | | putative ABC transporter ATP-binding protein YejF | 0.21 | GEMAOFIL_05639 | | Regulator of sigma D | low | > 96 |
| Pseudomonas fluorescens SBW25-INTG | 0.56 | PFLU_RS12880 | | ABC transporter ATP-binding protein | 0.21 | PFLU_RS29185 | | Rsd/AlgQ family anti-sigma factor | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.56 | PFLU_RS12880 | | ABC transporter ATP-binding protein | 0.21 | PFLU_RS29185 | | Rsd/AlgQ family anti-sigma factor | low | > 109 |
| Serratia liquefaciens MT49 | 0.55 | IAI46_17330 | | microcin C ABC transporter ATP-binding protein YejF | 0.32 | IAI46_01325 | | Rsd/AlgQ family anti-sigma factor | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.55 | Pf1N1B4_5629 | | Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) | 0.22 | Pf1N1B4_2190 | | Regulator of sigma D | low | > 87 |
| Marinobacter adhaerens HP15 | 0.54 | HP15_1810 | | peptide ABC transporter, ATP-binding protein | 0.30 | HP15_221 | | anti-RNA polymerase sigma 70 factor | low | > 73 |
Not shown: 27 genomes with orthologs for CSW01_17170 only; 5 genomes with orthologs for CSW01_01710 only