Conservation of cofitness between CSW01_10280 and CSW01_01485 in Vibrio cholerae E7946 ATCC 55056

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10280 heme exporter protein C 1.0 CSW01_01485 transcriptional regulator 0.87 11
Alteromonas macleodii MIT1002 0.73 MIT1002_00962 Cytochrome c-type biogenesis protein CcmC 0.31 MIT1002_03475 Gluconate utilization system GNT-I transcriptional repressor — —
Rahnella sp. WP5 0.66 EX31_RS19760 heme ABC transporter permease 0.54 EX31_RS05060 gluconate operon transcriptional repressor GntR low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF4880 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE 0.49 GFF570 Gluconate utilization system Gnt-I transcriptional repressor — —
Pantoea agglomerans CFBP13505 P0401 0.64 PagCFBP13516_RS06265 heme ABC transporter permease 0.50 PagCFBP13516_RS01635 gntR gluconate operon transcriptional repressor GntR low > 80
Pantoea sp. MT58 0.64 IAI47_06075 heme ABC transporter permease 0.52 IAI47_01650 gluconate operon transcriptional repressor GntR low > 76
Erwinia amylovora T8 0.64 OLJFJH_11085 heme ABC transporter permease 0.56 OLJFJH_04280 gluconate operon transcriptional repressor GntR low > 58
Escherichia coli ECOR38 0.63 HEPCGN_22555 ccmC heme exporter protein CcmC 0.52 HEPCGN_15660 gntR gluconate operon transcriptional repressor GntR low > 88
Escherichia coli ECRC98 0.63 JDDGAC_27250 ccmC heme exporter protein CcmC 0.52 JDDGAC_20465 gntR gluconate operon transcriptional repressor GntR low > 87
Escherichia coli BW25113 0.63 b2199 ccmC heme exporter subunit (NCBI) 0.52 b3438 gntR DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia coli ECRC100 0.63 OKFHMN_23290 ccmC heme exporter protein CcmC 0.52 OKFHMN_16835 gntR gluconate operon transcriptional repressor GntR low > 79
Escherichia coli ECOR27 0.63 NOLOHH_14865 ccmC heme exporter protein CcmC 0.51 NOLOHH_08635 gntR gluconate operon transcriptional repressor GntR low > 75
Escherichia coli ECRC101 0.63 MCAODC_14340 ccmC heme exporter protein CcmC 0.52 MCAODC_07365 gntR gluconate operon transcriptional repressor GntR low > 87
Escherichia fergusonii Becca 0.63 EFB2_01657 Heme exporter protein C 0.52 EFB2_00382 HTH-type transcriptional regulator GntR low > 86
Escherichia coli ECRC102 0.63 NIAGMN_21055 ccmC heme exporter protein CcmC 0.52 NIAGMN_14605 gntR gluconate operon transcriptional repressor GntR low > 80
Escherichia coli ECRC62 0.63 BNILDI_13785 ccmC heme exporter protein CcmC 0.52 BNILDI_02870 gntR gluconate operon transcriptional repressor GntR low > 75
Escherichia coli BL21 0.63 ECD_02126 heme export ABC transporter permease; CcmE-interacting protein 0.51 ECD_03289 d-gluconate inducible gluconate regulon transcriptional repressor low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_01512 Heme exporter protein C 0.52 OHPLBJKB_00264 HTH-type transcriptional regulator GntR low > 74
Escherichia coli ECRC99 0.63 KEDOAH_04895 ccmC heme exporter protein CcmC 0.52 KEDOAH_11305 gntR gluconate operon transcriptional repressor GntR — —
Escherichia coli Nissle 1917 0.63 ECOLIN_RS12850 heme exporter protein CcmC 0.52 ECOLIN_RS19675 gluconate operon transcriptional repressor GntR low > 55
Serratia liquefaciens MT49 0.61 IAI46_18100 heme ABC transporter permease 0.54 IAI46_23965 gluconate operon transcriptional repressor GntR low > 87
Klebsiella pneumoniae MKP103 0.59 KDGMDA_23860 heme ABC transporter permease 0.51 KDGMDA_07120 gluconate operon transcriptional repressor GntR low > 94
Klebsiella pneumoniae MRSN742743 0.59 GJGHJB_02101 ccmC Heme exporter protein C 0.51 GJGHJB_00314 gntR gluconate operon transcriptional repressor GntR low > 83
Pectobacterium carotovorum WPP14 0.59 HER17_RS09040 heme ABC transporter permease 0.52 HER17_RS01450 gluconate operon transcriptional repressor GntR low > 75
Pseudomonas sp. SVBP6 0.57 COO64_RS25700 heme ABC transporter permease 0.34 COO64_RS25590 LacI family DNA-binding transcriptional regulator — —
Pseudomonas sp. DMC3 0.56 GFF2487 Heme exporter protein C 0.33 GFF5268 HTH-type transcriptional regulator GntR — —
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_3641 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE 0.35 Pf1N1B4_558 Gluconate utilization system Gnt-I transcriptional repressor — —
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_2558 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE 0.34 Pf6N2E2_2865 Gluconate utilization system Gnt-I transcriptional repressor — —
Pseudomonas aeruginosa PUPa3 0.55 NPBIFN_03791 ccmC Heme exporter protein C 0.36 NPBIFN_02811 gntR LacI family DNA-binding transcriptional regulator GntR — —
Pseudomonas aeruginosa PA14 0.55 IKLFDK_07025 Heme exporter protein C 0.36 IKLFDK_11375 LacI family DNA-binding transcriptional regulator GntR — —
Pseudomonas aeruginosa MRSN321 0.55 PFGADD_03750 ccmC Heme exporter protein C 0.36 PFGADD_02780 gntR LacI family DNA-binding transcriptional regulator GntR — —
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_18860 heme ABC transporter permease 0.33 AO353_03255 LacI family transcriptional regulator — —
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_4314 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE 0.34 PfGW456L13_1925 Gluconate utilization system Gnt-I transcriptional repressor — —
Pseudomonas lactucae CFBP13502 0.55 GEMAOFIL_01872 Heme exporter protein C 0.34 GEMAOFIL_04536 HTH-type transcriptional regulator GntR — —
Pseudomonas stutzeri RCH2 0.55 Psest_1756 heme exporter protein CcmC 0.34 Psest_2126 Transcriptional regulators — —
Pseudomonas simiae WCS417 0.55 PS417_08700 heme ABC transporter permease 0.33 PS417_21990 LacI family transcriptional regulator — —
Pseudomonas sp. FW215-L2 0.55 GFF1876 Heme exporter protein C 0.34 GFF5170 HTH-type transcriptional regulator GntR low > 111
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_03650 heme ABC transporter permease 0.34 AO356_05065 LacI family transcriptional regulator — —
Pseudomonas fluorescens SBW25 0.54 PFLU_RS08655 heme ABC transporter permease 0.34 PFLU_RS23595 LacI family DNA-binding transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.54 PFLU_RS08655 heme ABC transporter permease 0.34 PFLU_RS23595 LacI family DNA-binding transcriptional regulator low > 109
Pseudomonas orientalis W4I3 0.54 QF045_RS11415 heme ABC transporter permease 0.34 QF045_RS24095 LacI family DNA-binding transcriptional regulator low > 93
Pseudomonas protegens RBAN4 0.54 FABNJH_08735 ccmC Heme exporter protein C 0.33 FABNJH_23640 Gluconate utilization system GNT-I transcriptional repressor — —
Pseudomonas sp. RS175 0.54 PFR28_00867 Heme exporter protein C 0.34 PFR28_00593 HTH-type transcriptional regulator GntR — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_3391 Cytochrome c-type biogenesis protein CcmC 0.32 Psyr_3336 transcriptional regulator, LacI family — —
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_3391 Cytochrome c-type biogenesis protein CcmC 0.32 Psyr_3336 transcriptional regulator, LacI family — —
Pseudomonas putida KT2440 0.53 PP_4325 protoheme IX reservoir complex subunit 0.31 PP_3415 Transcriptional regulator, LacI family — —
Pseudomonas sp. BP01 0.52 JOY50_RS00495 heme ABC transporter permease 0.31 JOY50_RS23605 LacI family DNA-binding transcriptional regulator — —
Pseudomonas segetis P6 0.49 ACVTMO_RS15410 heme ABC transporter permease 0.33 ACVTMO_RS11810 gntR HTH-type transcriptional regulator GntR — —
Azospirillum brasilense Sp245 0.48 AZOBR_RS00725 heme ABC transporter (exporter) permease component 0.31 AZOBR_RS15720 LacI family transcription regulator — —
Azospirillum sp. SherDot2 0.47 MPMX19_02530 Heme exporter protein C 0.29 MPMX19_05332 HTH-type transcriptional regulator GntR — —
Sinorhizobium meliloti 1021 0.45 SMc03849 heme exporter C (cytochrome C-type biogenesis protein) transmembrane 0.29 SM_b20667 LacI family transcriptional regulator low > 103
Agrobacterium fabrum C58 0.44 Atu2688 ABC transporter, membrane spanning protein (heme) 0.28 Atu4685 LacI family transcriptional regulator — —
Rhizobium sp. OAE497 0.42 ABIE40_RS18290 heme ABC transporter permease 0.25 ABIE40_RS04445 LacI family DNA-binding transcriptional regulator low > 107
Xanthobacter sp. DMC5 0.39 GFF971 Heme exporter protein C 0.31 GFF1533 HTH-type transcriptional regulator GntR — —
Dinoroseobacter shibae DFL-12 0.34 Dshi_1853 heme exporter protein CcmC (RefSeq) 0.27 Dshi_3322 transcriptional regulator, LacI family (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.34 PGA1_c18870 heme exporter protein C 0.28 PGA1_c33870 putative HTH-type transcriptional regulator GntR — —

Not shown: 23 genomes with orthologs for CSW01_10280 only; 21 genomes with orthologs for CSW01_01485 only