Conservation of cofitness between CSW01_06280 and CSW01_01485 in Vibrio cholerae E7946 ATCC 55056

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06280 succinylglutamate desuccinylase 1.0 CSW01_01485 transcriptional regulator 0.75 12
Alteromonas macleodii MIT1002 0.26 MIT1002_01538 Succinylglutamate desuccinylase 0.31 MIT1002_03475 Gluconate utilization system GNT-I transcriptional repressor — —
Pseudomonas segetis P6 0.25 MPMX49_03201 Succinylglutamate desuccinylase 0.33 MPMX49_02373 HTH-type transcriptional regulator GntR 0.60 1
Pseudomonas syringae pv. syringae B728a 0.25 Psyr_3559 succinylglutamate desuccinylase 0.32 Psyr_3336 transcriptional regulator, LacI family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.25 Psyr_3559 succinylglutamate desuccinylase 0.32 Psyr_3336 transcriptional regulator, LacI family low > 86
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS23350 succinylglutamate desuccinylase 0.29 QEN71_RS13585 LacI family DNA-binding transcriptional regulator low > 153
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.25 GFF3496 Succinylglutamate desuccinylase (EC 3.5.1.96) 0.49 GFF570 Gluconate utilization system Gnt-I transcriptional repressor low > 78
Erwinia amylovora T8 0.25 OLJFJH_14785 succinylglutamate desuccinylase 0.56 OLJFJH_04280 gluconate operon transcriptional repressor GntR low > 58
Pseudomonas aeruginosa PA14 0.25 IKLFDK_04015 succinylglutamate desuccinylase 0.36 IKLFDK_11375 LacI family DNA-binding transcriptional regulator GntR low > 100
Escherichia coli Nissle 1917 0.24 ECOLIN_RS09725 succinylglutamate desuccinylase 0.52 ECOLIN_RS19675 gluconate operon transcriptional repressor GntR — —
Escherichia coli ECRC100 0.24 OKFHMN_26925 astE succinylglutamate desuccinylase 0.52 OKFHMN_16835 gntR gluconate operon transcriptional repressor GntR low > 79
Enterobacter asburiae PDN3 0.24 EX28DRAFT_1748 succinylglutamate desuccinylase (EC 3.5.1.96) 0.51 EX28DRAFT_4274 transcriptional regulator, LacI family — —
Escherichia coli ECRC102 0.24 NIAGMN_01140 astE succinylglutamate desuccinylase 0.52 NIAGMN_14605 gntR gluconate operon transcriptional repressor GntR low > 80
Escherichia coli BW25113 0.24 b1744 astE succinylglutamate desuccinylase (NCBI) 0.52 b3438 gntR DNA-binding transcriptional repressor (NCBI) 0.16 17
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_01988 Succinylglutamate desuccinylase 0.52 OHPLBJKB_00264 HTH-type transcriptional regulator GntR low > 74
Escherichia coli ECOR27 0.24 NOLOHH_17440 astE succinylglutamate desuccinylase 0.51 NOLOHH_08635 gntR gluconate operon transcriptional repressor GntR low > 76
Escherichia coli BL21 0.24 ECD_01713 succinylglutamate desuccinylase 0.51 ECD_03289 d-gluconate inducible gluconate regulon transcriptional repressor low > 61
Pseudomonas sp. RS175 0.24 PFR28_03277 Succinylglutamate desuccinylase 0.34 PFR28_00593 HTH-type transcriptional regulator GntR low > 88
Escherichia coli ECRC98 0.24 JDDGAC_01500 astE succinylglutamate desuccinylase 0.52 JDDGAC_20465 gntR gluconate operon transcriptional repressor GntR low > 87
Escherichia coli ECRC99 0.24 KEDOAH_01185 astE succinylglutamate desuccinylase 0.52 KEDOAH_11305 gntR gluconate operon transcriptional repressor GntR — —
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_18755 succinylglutamate desuccinylase 0.34 AO356_05065 LacI family transcriptional regulator low > 104
Escherichia fergusonii Becca 0.24 EFB2_02249 Succinylglutamate desuccinylase 0.52 EFB2_00382 HTH-type transcriptional regulator GntR low > 86
Escherichia coli ECRC101 0.24 MCAODC_18485 astE succinylglutamate desuccinylase 0.52 MCAODC_07365 gntR gluconate operon transcriptional repressor GntR low > 88
Pseudomonas fluorescens FW300-N2E3 0.24 AO353_02995 succinylglutamate desuccinylase 0.33 AO353_03255 LacI family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N2E2 0.24 Pf6N2E2_5671 Succinylglutamate desuccinylase (EC 3.5.1.96) 0.34 Pf6N2E2_2865 Gluconate utilization system Gnt-I transcriptional repressor low > 103
Escherichia coli ECOR38 0.24 HEPCGN_05290 astE succinylglutamate desuccinylase 0.52 HEPCGN_15660 gntR gluconate operon transcriptional repressor GntR low > 88
Pseudomonas fluorescens GW456-L13 0.24 PfGW456L13_1977 Succinylglutamate desuccinylase (EC 3.5.1.96) (from data) 0.34 PfGW456L13_1925 Gluconate utilization system Gnt-I transcriptional repressor low > 87
Pseudomonas sp. BP01 0.24 JOY50_RS00950 astE succinylglutamate desuccinylase 0.31 JOY50_RS23605 LacI family DNA-binding transcriptional regulator low > 84
Klebsiella michiganensis M5al 0.24 BWI76_RS11690 succinylglutamate desuccinylase 0.51 BWI76_RS26245 transcriptional regulator 0.23 78
Pseudomonas putida KT2440 0.24 PP_4475 succinylglutamate desuccinylase 0.31 PP_3415 Transcriptional regulator, LacI family 0.29 51
Escherichia coli ECRC62 0.24 BNILDI_16225 astE succinylglutamate desuccinylase 0.52 BNILDI_02870 gntR gluconate operon transcriptional repressor GntR low > 75
Paraburkholderia bryophila 376MFSha3.1 0.24 H281DRAFT_06483 succinylglutamate desuccinylase 0.30 H281DRAFT_05920 transcriptional regulator, LacI family low > 103
Enterobacter sp. TBS_079 0.24 MPMX20_01869 Succinylglutamate desuccinylase 0.52 MPMX20_04319 HTH-type transcriptional regulator GntR low > 85
Pseudomonas sp. SVBP6 0.24 COO64_RS21585 astE succinylglutamate desuccinylase 0.34 COO64_RS25590 LacI family DNA-binding transcriptional regulator low > 93
Burkholderia phytofirmans PsJN 0.24 BPHYT_RS07720 Succinylglutamate desuccinylase (EC 3.5.1.96) (from data) 0.32 BPHYT_RS00410 LacI family transcription regulator low > 109
Pantoea sp. MT58 0.24 IAI47_11075 succinylglutamate desuccinylase 0.52 IAI47_01650 gluconate operon transcriptional repressor GntR low > 76
Pseudomonas fluorescens FW300-N1B4 0.24 Pf1N1B4_3447 Succinylglutamate desuccinylase (EC 3.5.1.96) 0.35 Pf1N1B4_558 Gluconate utilization system Gnt-I transcriptional repressor low > 87
Klebsiella pneumoniae MKP103 0.24 KDGMDA_19370 succinylglutamate desuccinylase 0.51 KDGMDA_07120 gluconate operon transcriptional repressor GntR low > 95
Pantoea agglomerans CFBP13505 P0401 0.24 PagCFBP13505_RS17520 succinylglutamate desuccinylase 0.50 PagCFBP13505_RS18155 gluconate operon transcriptional repressor GntR low > 74
Pseudomonas sp. DMC3 0.23 GFF4873 Succinylglutamate desuccinylase 0.33 GFF5268 HTH-type transcriptional regulator GntR low > 89
Pseudomonas lactucae CFBP13502 0.23 GEMAOFIL_04479 Succinylglutamate desuccinylase 0.34 GEMAOFIL_04536 HTH-type transcriptional regulator GntR low > 93
Pseudomonas simiae WCS417 0.23 PS417_21680 succinylglutamate desuccinylase 0.33 PS417_21990 LacI family transcriptional regulator low > 88
Pseudomonas fluorescens SBW25 0.23 PFLU_RS23285 succinylglutamate desuccinylase 0.34 PFLU_RS23595 LacI family DNA-binding transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.23 PFLU_RS23285 succinylglutamate desuccinylase 0.34 PFLU_RS23595 LacI family DNA-binding transcriptional regulator low > 109
Rahnella sp. WP5 0.23 EX31_RS17390 succinylglutamate desuccinylase 0.54 EX31_RS05060 gluconate operon transcriptional repressor GntR low > 89
Serratia liquefaciens MT49 0.22 IAI46_15315 succinylglutamate desuccinylase 0.54 IAI46_23965 gluconate operon transcriptional repressor GntR low > 86
Pseudomonas stutzeri RCH2 0.18 Psest_2717 Succinylglutamate desuccinylase 0.34 Psest_2126 Transcriptional regulators low > 67

Not shown: 10 genomes with orthologs for CSW01_06280 only; 26 genomes with orthologs for CSW01_01485 only