Conservation of cofitness between CSW01_07480 and CSW01_01350 in Vibrio cholerae E7946 ATCC 55056

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07480 ribosomal RNA large subunit methyltransferase K/L 1.0 CSW01_01350 polysaccharide biosynthesis protein 0.67 20
Dickeya dianthicola 67-19 0.56 HGI48_RS12910 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.77 HGI48_RS03510 polysaccharide biosynthesis protein low > 71
Dickeya dianthicola ME23 0.56 DZA65_RS13375 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.77 DZA65_RS03625 polysaccharide biosynthesis protein low > 75
Dickeya dadantii 3937 0.56 DDA3937_RS12840 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.77 DDA3937_RS03410 polysaccharide biosynthesis protein low > 74
Enterobacter asburiae PDN3 0.55 EX28DRAFT_1995 Predicted N6-adenine-specific DNA methylase 0.49 EX28DRAFT_0519 Predicted nucleoside-diphosphate sugar epimerases low > 76
Shewanella amazonensis SB2B 0.50 Sama_1600 rlmL 23S rRNA m(2)G2445 methyltransferase (RefSeq) 0.51 Sama_2244 polysaccharide biosynthesis protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.49 SO1851 conserved hypothetical protein (NCBI ptt file) 0.49 SO3171 polysaccharide biosynthesis protein (NCBI ptt file) low > 76
Pseudomonas stutzeri RCH2 0.42 Psest_1949 Predicted N6-adenine-specific DNA methylase 0.42 Psest_1825 Predicted nucleoside-diphosphate sugar epimerases low > 67
Pseudomonas sp. BP01 0.42 JOY50_RS22095 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.43 JOY50_RS16050 nucleoside-diphosphate sugar epimerase/dehydratase low > 84
Pseudomonas putida KT2440 0.42 PP_2096 fused 23S rRNA m2G2445 methyltransferase and 23S rRNA m7G2069 methyltransferase 0.42 PP_1805 Polysaccharide biosynthesis protein 0.43 36
Pseudomonas sp. SVBP6 0.42 COO64_RS05295 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.40 COO64_RS06660 nucleoside-diphosphate sugar epimerase/dehydratase low > 93
Pseudomonas sp. DMC3 0.42 GFF5254 Ribosomal RNA large subunit methyltransferase K/L 0.43 GFF4653 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 89
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_2108 23S rRNA m(2)G-2445 methyltransferase 0.41 Psyr_3636 Polysaccharide biosynthesis protein CapD low > 86
Pseudomonas lactucae CFBP13502 0.42 GEMAOFIL_04331 Ribosomal RNA large subunit methyltransferase K/L 0.44 GEMAOFIL_01779 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 93
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_2108 23S rRNA m(2)G-2445 methyltransferase 0.41 Psyr_3636 Polysaccharide biosynthesis protein CapD low > 86
Pseudomonas aeruginosa PA14 0.42 IKLFDK_15510 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.43 IKLFDK_16005 nucleotide sugar epimerase/dehydratase WbpM low > 100
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_4094 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) 0.42 PfGW456L13_2191 nucleotide sugar epimerase/dehydratase WbpM low > 87
Pseudomonas segetis P6 0.41 MPMX49_03025 Ribosomal RNA large subunit methyltransferase K/L 0.41 MPMX49_02884 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 75
Pseudomonas fluorescens SBW25 0.41 PFLU_RS22545 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.42 PFLU_RS08190 polysaccharide biosynthesis protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS22545 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.42 PFLU_RS08190 polysaccharide biosynthesis protein low > 109
Pseudomonas simiae WCS417 0.41 PS417_20930 50S rRNA methyltransferase 0.41 PS417_08190 membrane protein low > 88
Rhodanobacter sp000427505 FW510-R12 0.41 LRK53_RS14000 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.30 LRK53_RS11300 polysaccharide biosynthesis protein low > 59
Pseudomonas sp. RS175 0.41 PFR28_01055 Ribosomal RNA large subunit methyltransferase K/L 0.42 PFR28_00932 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 88
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS21235 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.29 ABZR86_RS05540 nucleoside-diphosphate sugar epimerase/dehydratase low > 74
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_00775 50S rRNA methyltransferase 0.42 AO353_01970 hypothetical protein low > 101
Pseudomonas sp. S08-1 0.41 OH686_03110 23S rRNA (guanine(2445)-N(2))-methyltransferase / 23S rRNA (guanine(2069)-N(7))-methyltransferase 0.45 OH686_20915 nucleotide sugar epimerase/dehydratase WbpM low > 80
Rhodanobacter denitrificans MT42 0.40 LRK55_RS14315 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.29 LRK55_RS17915 nucleoside-diphosphate sugar epimerase/dehydratase low > 63
Rhodanobacter denitrificans FW104-10B01 0.40 LRK54_RS14600 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.29 LRK54_RS18060 polysaccharide biosynthesis protein low > 59
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_2346 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) 0.42 Pf6N2E2_2506 nucleotide sugar epimerase/dehydratase WbpM low > 103
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_02605 50S rRNA methyltransferase 0.42 AO356_03345 hypothetical protein low > 104
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_03440 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.29 OKGIIK_07240 flaA1 polysaccharide biosynthesis protein low > 52
Marinobacter adhaerens HP15 0.38 HP15_1379 RNA methylase 0.47 HP15_2383 nucleotide sugar epimerase/dehydratase low > 73
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.3335.1 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) 0.28 Xcc-8004.2386.1 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) low > 74
Lysobacter sp. OAE881 0.37 ABIE51_RS14475 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.26 ABIE51_RS09370 nucleoside-diphosphate sugar epimerase/dehydratase low > 62
Acinetobacter radioresistens SK82 0.35 MPMX26_01097 Ribosomal RNA large subunit methyltransferase K/L 0.36 MPMX26_00062 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 36

Not shown: 31 genomes with orthologs for CSW01_07480 only; 32 genomes with orthologs for CSW01_01350 only