Conservation of cofitness between CSW01_10250 and CSW01_00560 in Vibrio cholerae E7946 ATCC 55056

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10250 c-type cytochrome biogenesis protein CcmI 1.0 CSW01_00560 DNA polymerase I 0.78 13
Serratia liquefaciens MT49 0.34 IAI46_18070 c-type cytochrome biogenesis protein CcmI 0.66 IAI46_24985 DNA polymerase I low > 87
Rahnella sp. WP5 0.32 EX31_RS19730 c-type cytochrome biogenesis protein CcmI 0.65 EX31_RS15905 DNA polymerase I low > 89
Pantoea sp. MT58 0.28 IAI47_06105 c-type cytochrome biogenesis protein CcmI 0.65 IAI47_00430 DNA polymerase I low > 76
Pantoea agglomerans CFBP13505 P0401 0.28 PagCFBP13505_RS00060 c-type cytochrome biogenesis protein CcmI 0.64 PagCFBP13505_RS18920 DNA polymerase I low > 74
Erwinia amylovora T8 0.25 OLJFJH_11115 c-type cytochrome biogenesis protein CcmI 0.64 OLJFJH_05470 DNA polymerase I low > 58
Alteromonas macleodii MIT1002 0.17 MIT1002_00968 Cytochrome c-type biogenesis protein CcmH precursor 0.62 MIT1002_00014 DNA polymerase I low > 70
Marinobacter adhaerens HP15 0.15 HP15_2277 TPR repeat protein 0.52 HP15_293 DNA polymerase I low > 73
Pseudomonas stutzeri RCH2 0.15 Psest_1762 cytochrome c-type biogenesis protein CcmI 0.58 Psest_4219 DNA polymerase I low > 67
Pseudomonas segetis P6 0.13 MPMX49_03104 hypothetical protein 0.57 MPMX49_00321 DNA polymerase I low > 75
Pseudomonas lactucae CFBP13502 0.13 GEMAOFIL_01878 hypothetical protein 0.55 GEMAOFIL_00284 DNA polymerase I low > 96
Pseudomonas sp. SVBP6 0.12 COO64_RS25730 ccmI c-type cytochrome biogenesis protein CcmI 0.57 COO64_RS02475 polA DNA polymerase I 0.50 24
Pseudomonas sp. DMC3 0.12 GFF2493 hypothetical protein 0.55 GFF631 DNA polymerase I low > 89
Pseudomonas simiae WCS417 0.12 PS417_08730 cytochrome C 0.56 PS417_00405 DNA polymerase I low > 88
Pseudomonas aeruginosa PA14 0.12 IKLFDK_07055 Cytochrome c-type biogenesis protein CycH 0.58 IKLFDK_25945 DNA polymerase I low > 98
Pseudomonas fluorescens GW456-L13 0.12 PfGW456L13_4308 Cytochrome c heme lyase subunit CcmH 0.54 PfGW456L13_594 DNA polymerase I (EC 2.7.7.7) low > 87
Pseudomonas fluorescens FW300-N2C3 0.12 AO356_03620 cytochrome C 0.55 AO356_11465 DNA polymerase I low > 104
Pseudomonas fluorescens SBW25-INTG 0.12 PFLU_RS08685 c-type cytochrome biogenesis protein CcmI 0.55 PFLU_RS00395 DNA polymerase I low > 109
Pseudomonas fluorescens SBW25 0.12 PFLU_RS08685 c-type cytochrome biogenesis protein CcmI 0.55 PFLU_RS00395 DNA polymerase I 0.53 41
Pseudomonas aeruginosa MRSN321 0.12 DY961_RS05495 ccmI;go_function=unfolded c-type cytochrome biogenesis protein CcmI 0.58 DY961_RS25765 polA;go_function=nucleic DNA polymerase I low > 100
Pseudomonas aeruginosa PUPa3 0.12 DQ20_RS47295 ccmI;go_function=unfolded c-type cytochrome biogenesis protein CcmI 0.58 DQ20_RS58195 polA;go_function=nucleic DNA polymerase I — —
Pseudomonas fluorescens FW300-N1B4 0.12 Pf1N1B4_3647 Cytochrome c heme lyase subunit CcmH 0.55 Pf1N1B4_1875 DNA polymerase I (EC 2.7.7.7) — —
Pseudomonas fluorescens FW300-N2E2 0.12 Pf6N2E2_2552 Cytochrome c heme lyase subunit CcmH 0.54 Pf6N2E2_4162 DNA polymerase I (EC 2.7.7.7) low > 103
Pseudomonas fluorescens FW300-N2E3 0.12 AO353_18890 cytochrome C 0.56 AO353_10930 DNA polymerase I low > 101
Shewanella amazonensis SB2B 0.11 Sama_0247 cytochrome c-type biogenesis protein CcmH (RefSeq) 0.63 Sama_0093 DNA-directed DNA polymerase (RefSeq) low > 62
Pseudomonas syringae pv. syringae B728a ΔmexB 0.11 Psyr_3385 TPR repeat protein 0.55 Psyr_0270 DNA polymerase I — —
Pseudomonas syringae pv. syringae B728a 0.11 Psyr_3385 TPR repeat protein 0.55 Psyr_0270 DNA polymerase I — —
Pseudomonas sp. S08-1 0.11 OH686_02620 Cytochrome c heme lyase subunit CcmH 0.57 OH686_12215 DNA polymerase I low > 80
Pseudomonas sp. RS175 0.11 PFR28_00873 hypothetical protein 0.54 PFR28_04624 DNA polymerase I low > 88
Pseudomonas sp. BP01 0.11 JOY50_RS00465 ccmI c-type cytochrome biogenesis protein CcmI 0.58 JOY50_RS21110 polA DNA polymerase I low > 84
Shewanella oneidensis MR-1 0.10 SO0265 conserved hypothetical protein (NCBI ptt file) 0.62 SO4669 polA DNA polymerase I (NCBI ptt file) — —
Pseudomonas putida KT2440 0.10 PP_4320 cytochrome c-type biogenesis protein 0.58 PP_0123 DNA polymerase I, 5 0.21 83
Shewanella sp. ANA-3 0.10 Shewana3_0233 TPR repeat-containing protein (RefSeq) 0.62 Shewana3_4109 DNA polymerase I (RefSeq) — —
Shewanella loihica PV-4 0.08 Shew_0192 TPR repeat-containing protein (RefSeq) 0.63 Shew_3714 DNA polymerase I (RefSeq) low > 60

Not shown: 0 genomes with orthologs for CSW01_10250 only; 85 genomes with orthologs for CSW01_00560 only