Conservation of cofitness between CSW01_07185 and CSW01_00560 in Vibrio cholerae E7946 ATCC 55056

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07185 universal stress protein UspE 1.0 CSW01_00560 DNA polymerase I 0.56 13
Pantoea sp. MT58 0.55 IAI47_09575 universal stress protein UspE 0.65 IAI47_00430 DNA polymerase I low > 76
Enterobacter asburiae PDN3 0.55 EX28DRAFT_1542 Universal stress protein UspA and related nucleotide-binding proteins 0.64 EX28DRAFT_4343 DNA polymerase I (EC 2.7.7.7) — —
Enterobacter sp. TBS_079 0.55 MPMX20_02033 Universal stress protein E 0.64 MPMX20_04601 DNA polymerase I low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF2657 Universal stress protein E 0.63 GFF2216 DNA polymerase I (EC 2.7.7.7) low > 78
Erwinia amylovora T8 0.55 OLJFJH_13920 universal stress protein UspE 0.64 OLJFJH_05470 DNA polymerase I low > 58
Serratia liquefaciens MT49 0.55 IAI46_13265 universal stress protein UspE 0.66 IAI46_24985 DNA polymerase I low > 86
Erwinia tracheiphila SCR3 0.55 LU632_RS11425 uspE universal stress protein UspE 0.64 LU632_RS23870 polA DNA polymerase I — —
Klebsiella michiganensis M5al 0.55 BWI76_RS16190 universal stress protein UspE 0.63 BWI76_RS00355 DNA polymerase I low > 92
Escherichia coli BW25113 0.55 b1333 uspE stress-induced protein (NCBI) 0.64 b3863 polA DNA polymerase I (NCBI) low > 76
Escherichia coli ECOR27 0.55 NOLOHH_19945 uspE universal stress protein UspE 0.64 NOLOHH_06280 polA DNA polymerase I — —
Escherichia coli ECRC99 0.55 KEDOAH_26525 uspE universal stress protein UspE 0.64 KEDOAH_14000 polA DNA polymerase I — —
Escherichia coli ECRC100 0.55 OKFHMN_02245 uspE universal stress protein UspE 0.64 OKFHMN_14150 polA DNA polymerase I — —
Escherichia fergusonii Becca 0.55 EFB2_02594 Universal stress protein E 0.64 EFB2_04753 DNA polymerase I — —
Escherichia coli Nissle 1917 0.55 ECOLIN_RS08000 universal stress protein UspE 0.64 ECOLIN_RS22270 DNA polymerase I — —
Escherichia coli ECRC98 0.55 JDDGAC_04790 uspE universal stress protein UspE 0.64 JDDGAC_17775 polA DNA polymerase I — —
Escherichia coli ECRC101 0.55 MCAODC_16025 uspE universal stress protein UspE 0.64 MCAODC_04650 polA DNA polymerase I — —
Escherichia coli BL21 0.55 ECD_01310 stress-induced protein 0.64 ECD_03749 5 — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_02349 Universal stress protein E 0.64 OHPLBJKB_04189 DNA polymerase I — —
Escherichia coli ECOR38 0.55 HEPCGN_25920 uspE universal stress protein UspE 0.64 HEPCGN_12785 polA DNA polymerase I — —
Escherichia coli ECRC62 0.55 BNILDI_18095 uspE universal stress protein UspE 0.64 BNILDI_05250 polA DNA polymerase I — —
Escherichia coli ECRC102 0.55 NIAGMN_26415 uspE universal stress protein UspE 0.64 NIAGMN_11905 polA DNA polymerase I — —
Shewanella loihica PV-4 0.54 Shew_1994 universal stress protein UspE (RefSeq) 0.63 Shew_3714 DNA polymerase I (RefSeq) low > 60
Dickeya dadantii 3937 0.54 DDA3937_RS10955 universal stress protein UspE 0.63 DDA3937_RS00105 DNA polymerase I — —
Shewanella oneidensis MR-1 0.54 SO2355 universal stress protein family (NCBI ptt file) 0.62 SO4669 polA DNA polymerase I (NCBI ptt file) — —
Dickeya dianthicola 67-19 0.53 HGI48_RS10905 universal stress protein UspE 0.63 HGI48_RS21260 DNA polymerase I — —
Dickeya dianthicola ME23 0.53 DZA65_RS11365 universal stress protein UspE 0.62 DZA65_RS22235 DNA polymerase I — —
Shewanella sp. ANA-3 0.53 Shewana3_2116 universal stress protein UspE (RefSeq) 0.62 Shewana3_4109 DNA polymerase I (RefSeq) — —
Pectobacterium carotovorum WPP14 0.53 HER17_RS10520 universal stress protein UspE 0.65 HER17_RS21470 DNA polymerase I — —
Rahnella sp. WP5 0.53 EX31_RS07205 universal stress protein UspE 0.65 EX31_RS15905 DNA polymerase I low > 89
Shewanella amazonensis SB2B 0.52 Sama_1800 universal stress protein UspE (RefSeq) 0.63 Sama_0093 DNA-directed DNA polymerase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.50 MIT1002_02138 Universal stress protein E 0.62 MIT1002_00014 DNA polymerase I low > 70
Pseudomonas sp. RS175 0.19 PFR28_02374 Universal stress protein E 0.54 PFR28_04624 DNA polymerase I low > 88
Pseudomonas fluorescens FW300-N2C3 0.19 AO356_24400 universal stress protein UspA 0.55 AO356_11465 DNA polymerase I low > 104
Pseudomonas fluorescens FW300-N2E3 0.18 AO353_19850 universal stress protein 0.56 AO353_10930 DNA polymerase I low > 101
Pseudomonas fluorescens FW300-N2E2 0.18 Pf6N2E2_567 Universal stress protein family 7 0.54 Pf6N2E2_4162 DNA polymerase I (EC 2.7.7.7) low > 103
Pseudomonas fluorescens GW456-L13 0.18 PfGW456L13_3376 Universal stress protein family 7 0.54 PfGW456L13_594 DNA polymerase I (EC 2.7.7.7) — —
Pseudomonas sp. DMC3 0.18 GFF1700 Universal stress protein E 0.55 GFF631 DNA polymerase I low > 89
Pseudomonas stutzeri RCH2 0.18 Psest_2307 Universal stress protein UspA and related nucleotide-binding proteins 0.58 Psest_4219 DNA polymerase I low > 67
Pseudomonas sp. BP01 0.18 JOY50_RS12780 universal stress protein 0.58 JOY50_RS21110 polA DNA polymerase I low > 84
Pseudomonas fluorescens FW300-N1B4 0.17 Pf1N1B4_4566 Universal stress protein family 7 0.55 Pf1N1B4_1875 DNA polymerase I (EC 2.7.7.7) — —
Pseudomonas simiae WCS417 0.17 PS417_14980 universal stress protein UspA 0.56 PS417_00405 DNA polymerase I low > 88
Pseudomonas fluorescens SBW25-INTG 0.17 PFLU_RS17010 universal stress protein A 0.55 PFLU_RS00395 DNA polymerase I low > 109
Pseudomonas fluorescens SBW25 0.17 PFLU_RS17010 universal stress protein A 0.55 PFLU_RS00395 DNA polymerase I low > 109
Pseudomonas putida KT2440 0.16 PP_2187 Universal stress protein family 0.58 PP_0123 DNA polymerase I, 5 low > 96
Pseudomonas sp. SVBP6 0.16 COO64_RS09935 universal stress protein 0.57 COO64_RS02475 polA DNA polymerase I low > 93

Not shown: 0 genomes with orthologs for CSW01_07185 only; 63 genomes with orthologs for CSW01_00560 only