Conservation of cofitness between CSW01_05645 and CSW01_00440 in Vibrio cholerae E7946 ATCC 55056

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05645 biotin synthase 1.0 CSW01_00440 DNA recombination protein RmuC 0.51 13
Erwinia tracheiphila SCR3 0.71 LU632_RS09130 bioB biotin synthase BioB 0.47 LU632_RS24010 rmuC DNA recombination protein RmuC — —
Erwinia tracheiphila HP pepo 2.2 0.71 IJEDHG_19565 bioB biotin synthase BioB 0.47 IJEDHG_08655 DNA recombination protein RmuC — —
Dickeya dadantii 3937 0.71 DDA3937_RS08510 biotin synthase BioB 0.48 DDA3937_RS20335 DNA recombination protein RmuC low > 74
Dickeya dianthicola 67-19 0.71 HGI48_RS08675 biotin synthase BioB 0.48 HGI48_RS00890 DNA recombination protein RmuC low > 71
Dickeya dianthicola ME23 0.70 DZA65_RS08965 biotin synthase BioB 0.48 DZA65_RS00950 DNA recombination protein RmuC low > 75
Pseudomonas aeruginosa PUPa3 0.70 DQ20_RS36825 bioB;go_function=biotin biotin synthase BioB 0.36 DQ20_RS45480 rmuC;inference=COORDINATES DNA recombination protein RmuC low > 101
Pseudomonas aeruginosa MRSN321 0.70 DY961_RS22505 bioB;go_function=biotin biotin synthase BioB 0.36 DY961_RS07305 rmuC;inference=COORDINATES DNA recombination protein RmuC — —
Pseudomonas aeruginosa PA14 0.70 IKLFDK_22935 biotin synthase BioB 0.37 IKLFDK_04710 DNA recombination RmuC-like protein low > 98
Escherichia coli BW25113 0.70 b0775 bioB biotin synthase (NCBI) 0.47 b3832 rmuC predicted recombination limiting protein (NCBI) low > 76
Escherichia coli ECOR38 0.70 HEPCGN_01640 bioB biotin synthase BioB 0.47 HEPCGN_12940 rmuC DNA recombination protein RmuC low > 88
Escherichia coli ECOR27 0.70 NOLOHH_22770 bioB biotin synthase BioB 0.47 NOLOHH_06440 rmuC DNA recombination protein RmuC low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_02938 Biotin synthase 0.47 OHPLBJKB_04219 hypothetical protein low > 74
Escherichia coli ECRC62 0.70 BNILDI_21040 bioB biotin synthase BioB 0.47 BNILDI_05090 rmuC DNA recombination protein RmuC low > 75
Pantoea sp. MT58 0.70 IAI47_13530 biotin synthase BioB 0.47 IAI47_18290 DNA recombination protein RmuC low > 76
Pseudomonas stutzeri RCH2 0.70 Psest_0411 biotin synthetase 0.33 Psest_1525 Uncharacterized protein conserved in bacteria low > 67
Escherichia coli Nissle 1917 0.69 ECOLIN_RS04130 biotin synthase BioB 0.47 ECOLIN_RS22110 DNA recombination protein RmuC low > 55
Serratia liquefaciens MT49 0.69 IAI46_06525 biotin synthase BioB 0.48 IAI46_01060 DNA recombination protein RmuC low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_4687 biotin synthase 0.36 Psyr_3666 Protein of unknown function DUF195 low > 86
Escherichia fergusonii Becca 0.69 EFB2_03330 Biotin synthase 0.47 EFB2_04783 hypothetical protein low > 86
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_4687 biotin synthase 0.36 Psyr_3666 Protein of unknown function DUF195 low > 86
Escherichia coli ECRC102 0.69 NIAGMN_04445 bioB biotin synthase BioB 0.47 NIAGMN_12065 rmuC DNA recombination protein RmuC low > 80
Escherichia coli ECRC100 0.69 OKFHMN_06400 bioB biotin synthase BioB 0.47 OKFHMN_14310 rmuC DNA recombination protein RmuC low > 79
Escherichia coli ECRC98 0.69 JDDGAC_10035 bioB biotin synthase BioB 0.47 JDDGAC_17935 rmuC DNA recombination protein RmuC low > 87
Pectobacterium carotovorum WPP14 0.69 HER17_RS13460 biotin synthase BioB 0.49 HER17_RS20615 DNA recombination protein RmuC low > 75
Escherichia coli ECRC101 0.69 MCAODC_25615 bioB biotin synthase BioB 0.47 MCAODC_04815 rmuC DNA recombination protein RmuC low > 87
Erwinia amylovora T8 0.69 OLJFJH_16760 biotin synthase BioB 0.48 OLJFJH_06495 DNA recombination protein RmuC low > 58
Escherichia coli ECRC99 0.69 KEDOAH_21510 bioB biotin synthase BioB 0.47 KEDOAH_13840 rmuC DNA recombination protein RmuC — —
Pantoea agglomerans CFBP13505 P0401 0.69 PagCFBP13505_RS03770 biotin synthase BioB 0.47 PagCFBP13505_RS15270 DNA recombination protein RmuC low > 74
Rahnella sp. WP5 0.69 EX31_RS23695 biotin synthase BioB 0.49 EX31_RS14630 DNA recombination protein RmuC low > 89
Pseudomonas sp. S08-1 0.69 OH686_10355 biotin synthase 0.35 OH686_19585 DNA recombination protein RmuC low > 80
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_4759 Biotin synthase (EC 2.8.1.6) 0.35 Pf6N2E2_5759 DNA recombination protein RmuC low > 103
Pseudomonas fluorescens FW300-N2E3 0.69 AO353_07525 biotin synthase 0.36 AO353_02560 recombinase RmuC low > 101
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_14135 biotin synthase 0.35 AO356_19220 recombinase RmuC low > 104
Klebsiella michiganensis M5al 0.69 BWI76_RS08760 biotin synthase 0.48 BWI76_RS01300 DNA recombination protein RmuC low > 92
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS27650 biotin synthase BioB 0.35 PFLU_RS21940 DNA recombination protein RmuC low > 109
Pseudomonas fluorescens SBW25 0.68 PFLU_RS27650 biotin synthase BioB 0.35 PFLU_RS21940 DNA recombination protein RmuC low > 109
Pseudomonas lactucae CFBP13502 0.68 GEMAOFIL_05322 Biotin synthase 0.34 GEMAOFIL_04191 hypothetical protein low > 96
Pseudomonas sp. DMC3 0.68 GFF76 Biotin synthase 0.36 GFF2565 hypothetical protein low > 89
Shewanella amazonensis SB2B 0.66 Sama_1438 biotin synthase (RefSeq) 0.41 Sama_1894 hypothetical protein (RefSeq) — —
Shewanella oneidensis MR-1 0.65 SO2740 bioB biotin synthase (NCBI ptt file) 0.44 SO2041 conserved hypothetical protein (NCBI ptt file) — —
Shewanella sp. ANA-3 0.65 Shewana3_2519 biotin synthase (RefSeq) 0.44 Shewana3_2235 hypothetical protein (RefSeq) low > 73
Sphingomonas koreensis DSMZ 15582 0.56 Ga0059261_3989 biotin synthase (EC 2.8.1.6) 0.17 Ga0059261_0643 Uncharacterized protein conserved in bacteria low > 68

Not shown: 70 genomes with orthologs for CSW01_05645 only; 0 genomes with orthologs for CSW01_00440 only