Conservation of cofitness between CSW01_03155 and CSW01_00215 in Vibrio cholerae E7946 ATCC 55056

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03155 RNA polymerase-binding transcription factor DksA 1.0 CSW01_00215 potassium uptake protein TrkH 0.89 3
Shewanella loihica PV-4 0.83 Shew_3129 TraR/DksA family transcriptional regulator (RefSeq) 0.57 Shew_3740 TrkH family potassium uptake protein (RefSeq) — —
Shewanella oneidensis MR-1 0.83 SO0874 dksA DnaK suppressor protein (NCBI ptt file) 0.56 SO0028 trkH-2 potassium uptake protein TrkH (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.82 Sama_0780 TraR/DksA family transcriptional regulator (RefSeq) 0.59 Sama_0039 potassium uptake protein TrkH (RefSeq) low > 62
Shewanella sp. ANA-3 0.82 Shewana3_3404 TraR/DksA family transcriptional regulator (RefSeq) 0.56 Shewana3_0031 TrkH family potassium uptake protein (RefSeq) low > 73
Pseudomonas sp. S08-1 0.70 OH686_17280 RNA polymerase-binding protein DksA 0.50 OH686_20750 Trk potassium uptake system protein TrkH — —
Pseudomonas aeruginosa PUPa3 0.70 DQ20_RS52680 dksA;go_function=enzyme RNA polymerase-binding protein DksA 0.48 DQ20_RS40175 TrkH family potassium uptake protein low > 101
Pseudomonas aeruginosa MRSN321 0.70 DY961_RS09350 dksA;go_function=enzyme RNA polymerase-binding protein DksA 0.48 DY961_RS00865 TrkH family potassium uptake protein low > 100
Pseudomonas aeruginosa PA14 0.70 IKLFDK_30000 RNA polymerase-binding protein DksA 0.49 IKLFDK_09050 potassium transporter TrkH low > 98
Pseudomonas segetis P6 0.69 ACVTMO_RS06235 dksA RNA polymerase-binding protein DksA 0.50 ACVTMO_RS14485 TrkH family potassium uptake protein — —
Pseudomonas orientalis W4I3 0.69 QF045_RS26135 RNA polymerase-binding protein DksA 0.49 QF045_RS24335 TrkH family potassium uptake protein low > 93
Pseudomonas lactucae CFBP13502 0.69 GEMAOFIL_04926 RNA polymerase-binding transcription factor DksA 0.48 GEMAOFIL_04576 Trk system potassium uptake protein TrkI low > 96
Pseudomonas simiae WCS417 0.69 PS417_23875 molecular chaperone DnaK 0.49 PS417_22205 potassium transporter TrkH — —
Pseudomonas fluorescens FW300-N1B4 0.68 Pf1N1B4_2862 C4-type zinc finger protein, DksA/TraR family 0.48 Pf1N1B4_3543 Potassium uptake protein TrkH — —
Pseudomonas sp. DMC3 0.68 GFF4034 RNA polymerase-binding transcription factor DksA 0.51 GFF2771 Trk system potassium uptake protein TrkI low > 89
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_16095 molecular chaperone DnaK 0.48 AO356_03995 potassium transporter TrkH low > 104
Pseudomonas stutzeri RCH2 0.68 Psest_1003 RNA polymerase-binding protein DksA 0.48 Psest_1879 Trk-type K+ transport systems, membrane components — —
Pseudomonas sp. RS175 0.68 PFR28_03714 RNA polymerase-binding transcription factor DksA 0.49 PFR28_00798 Trk system potassium uptake protein TrkI low > 88
Pseudomonas sp. BP01 0.68 JOY50_RS27695 dksA RNA polymerase-binding protein DksA 0.49 JOY50_RS01110 TrkH family potassium uptake protein 0.74 71
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_14420 molecular chaperone DnaK 0.50 AO353_18480 potassium transporter TrkH low > 101
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_0835 transcriptional regulator, TraR/DksA family 0.47 Psyr_3593 K+ transporter Trk low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_0835 transcriptional regulator, TraR/DksA family 0.47 Psyr_3593 K+ transporter Trk low > 86
Pseudomonas fluorescens SBW25 0.67 PFLU_RS25715 RNA polymerase-binding protein DksA 0.47 PFLU_RS23830 TrkH family potassium uptake protein low > 109
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_1528 C4-type zinc finger protein, DksA/TraR family 0.49 PfGW456L13_4413 Potassium uptake protein TrkH low > 87
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS25715 RNA polymerase-binding protein DksA 0.47 PFLU_RS23830 TrkH family potassium uptake protein low > 109
Pseudomonas sp. SVBP6 0.67 COO64_RS15070 dksA RNA polymerase-binding protein DksA 0.50 COO64_RS21795 TrkH family potassium uptake protein 0.74 54
Pseudomonas putida KT2440 0.64 PP_4693 RNA polymerase-binding transcription factor DksA 0.50 PP_3953 potassium transporter low > 96
Marinobacter adhaerens HP15 0.63 HP15_332 transcriptional regulator, TraR/DksA family 0.43 HP15_1705 potassium uptake protein, TrkH family — —
Sinorhizobium meliloti 1021 0.35 SMc00469 DnaK suppressor protein 0.30 SMa1691 Cation transport ATPase — —
Agrobacterium fabrum C58 0.35 Atu1359 dnaK deletion suppressor protein 0.29 Atu1204 potassium uptake protein low > 89
Xanthobacter sp. DMC5 0.33 GFF1254 RNA polymerase-binding transcription factor DksA 0.35 GFF4632 Trk system potassium uptake protein TrkI — —
Phaeobacter inhibens DSM 17395 0.32 PGA1_c11040 dnaK suppressor protein DksA 0.40 PGA1_c23520 trk system potassium uptake protein — —
Rhodospirillum rubrum S1H 0.28 Rru_A2847 Transcriptional regulators, TraR/DksA family (NCBI) 0.37 Rru_A1134 Cation transporter (NCBI) — —

Not shown: 43 genomes with orthologs for CSW01_03155 only; 12 genomes with orthologs for CSW01_00215 only