Conservation of cofitness between BPHYT_RS04640 and BPHYT_RS33290 in Burkholderia phytofirmans PsJN

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS04640 branched-chain amino acid ABC transporter substrate-binding protein 1.0 BPHYT_RS33290 ABC transporter permease 0.26 8
Paraburkholderia bryophila 376MFSha3.1 0.97 H281DRAFT_00094 amino acid/amide ABC transporter substrate-binding protein, HAAT family 0.88 H281DRAFT_03732 carbohydrate ABC transporter membrane protein 1, CUT1 family low > 103
Paraburkholderia sabiae LMG 24235 0.92 QEN71_RS25335 urea ABC transporter substrate-binding protein 0.90 QEN71_RS10195 sugar ABC transporter permease low > 153
Cupriavidus basilensis FW507-4G11 0.81 RR42_RS05630 branched-chain amino acid ABC transporter substrate-binding protein 0.77 RR42_RS13780 ABC transporter permease low > 128
Ralstonia sp. UNC404CL21Col 0.80 ABZR87_RS14775 urea ABC transporter substrate-binding protein 0.82 ABZR87_RS03035 sugar ABC transporter permease low > 80
Ralstonia solanacearum PSI07 0.79 RPSI07_RS14440 urea ABC transporter substrate-binding protein 0.82 RPSI07_RS09870 sugar ABC transporter permease low > 81
Ralstonia solanacearum GMI1000 0.79 RS_RS10240 urea ABC transporter substrate-binding protein 0.82 RS_RS15315 sugar ABC transporter permease low > 80
Ralstonia solanacearum IBSBF1503 0.79 RALBFv3_RS02870 urea ABC transporter substrate-binding protein 0.82 RALBFv3_RS07375 sugar ABC transporter permease low > 76
Ralstonia solanacearum UW163 0.79 UW163_RS10855 urea ABC transporter substrate-binding protein 0.82 UW163_RS06245 sugar ABC transporter permease — —
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_3547 Urea ABC transporter, substrate binding protein UrtA 0.63 Pf6N2E2_105 Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) low > 103
Pseudomonas fluorescens FW300-N2C3 0.78 AO356_08340 branched-chain amino acid ABC transporter substrate-binding protein 0.63 AO356_21620 ABC transporter permease low > 104
Pseudomonas sp. RS175 0.78 PFR28_05187 Aliphatic amidase expression-regulating protein 0.63 PFR28_02790 Melibiose/raffinose/stachyose import permease protein MelD low > 88
Pseudomonas fluorescens GW456-L13 0.77 PfGW456L13_81 Urea ABC transporter, substrate binding protein UrtA 0.62 PfGW456L13_2614 Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) 0.20 81
Pseudomonas syringae pv. syringae B728a 0.77 Psyr_4426 amino acid/amide ABC transporter substrate-binding protein, HAAT family 0.66 Psyr_1739 carbohydrate ABC transporter membrane protein 1, CUT1 family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.77 Psyr_4426 amino acid/amide ABC transporter substrate-binding protein, HAAT family 0.66 Psyr_1739 carbohydrate ABC transporter membrane protein 1, CUT1 family low > 86
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_1343 Urea ABC transporter, substrate binding protein UrtA 0.65 Pf1N1B4_4010 Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) low > 87
Pseudomonas fluorescens SBW25 0.77 PFLU_RS02905 urea ABC transporter substrate-binding protein 0.64 PFLU_RS18260 sugar ABC transporter permease low > 109
Pseudomonas simiae WCS417 0.77 PS417_02835 branched-chain amino acid ABC transporter substrate-binding protein 0.63 PS417_16230 ABC transporter permease low > 88
Pseudomonas fluorescens SBW25-INTG 0.77 PFLU_RS02905 urea ABC transporter substrate-binding protein 0.64 PFLU_RS18260 sugar ABC transporter permease low > 109
Herbaspirillum seropedicae SmR1 0.76 HSERO_RS23580 branched-chain amino acid ABC transporter substrate-binding protein 0.75 HSERO_RS04855 ABC transporter permease low > 78
Pseudomonas putida KT2440 0.76 PP_4841 putative Urea ABC transporter, periplasmic protein 0.66 PP_2262 sugar ABC transporter, permease protein low > 96
Pseudomonas sp. S08-1 0.74 OH686_07660 Urea ABC transporter, substrate-binding protein UrtA 0.67 OH686_03690 Glycerol ABC transporter, permease protein GlpP low > 80
Variovorax sp. OAS795 0.72 ABID97_RS22565 urea ABC transporter substrate-binding protein 0.76 ABID97_RS19940 sugar ABC transporter permease low > 91
Acidovorax sp. GW101-3H11 0.70 Ac3H11_3702 Urea ABC transporter, urea binding protein 0.74 Ac3H11_793 ABC transporter for Glycerol, permease component 1 (from data) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.69 GFF3275 Urea ABC transporter, substrate binding protein UrtA 0.73 GFF2811 Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) low > 90
Rhodopseudomonas palustris CGA009 0.58 TX73_019015 urea ABC transporter substrate-binding protein 0.63 TX73_022845 sugar ABC transporter permease low > 86
Azospirillum sp. SherDot2 0.56 MPMX19_03828 Aliphatic amidase expression-regulating protein 0.65 MPMX19_05970 L-arabinose transport system permease protein AraP low > 112
Agrobacterium fabrum C58 0.56 Atu2414 ABC transporter, substrate binding protein (urea/amide) 0.59 Atu3894 sugar ABC transporter permease low > 89
Marinobacter adhaerens HP15 0.56 HP15_2881 urea short-chain amide or branched-chain amino acid uptake ABC transporter periplasmic solute-binding protein 0.63 HP15_2162 sugar ABC transporter, permease protein low > 73
Dinoroseobacter shibae DFL-12 0.56 Dshi_2695 putative ureashort-chain amide or branched-chain amino acid uptake ABC transporter periplasmic solute-binding protein precursor (RefSeq) 0.57 Dshi_3130 binding-protein-dependent transport systems inner membrane component (RefSeq) low > 64
Sinorhizobium meliloti 1021 0.54 SM_b20605 branched-chain amino acid ABC transporter substrate-binding protein 0.57 SMc02517 ABC transporter permease low > 103
Rhizobium sp. OAE497 0.54 ABIE40_RS14665 urea ABC transporter substrate-binding protein 0.56 ABIE40_RS25655 sugar ABC transporter permease low > 107

Not shown: 11 genomes with orthologs for BPHYT_RS04640 only; 3 genomes with orthologs for BPHYT_RS33290 only