| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Kangiella aquimarina DSM 16071 | 1.0 | B158DRAFT_1515 | | methyltransferase, putative | 1.0 | B158DRAFT_1339 | | L-serine dehydratase, iron-sulfur-dependent, single chain form | 0.52 | 7 |
| Shewanella loihica PV-4 | 0.53 | Shew_2082 | | putative methyltransferase (RefSeq) | 0.61 | Shew_1625 | | L-serine dehydratase 1 (RefSeq) | low | > 60 |
| Shewanella oneidensis MR-1 | 0.53 | SO2436 | | methyltransferase, putative (NCBI ptt file) | 0.62 | SO2248 | sdaA | L-serine dehydratase 1 (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.52 | Shewana3_1950 | | putative methyltransferase (RefSeq) | 0.62 | Shewana3_2295 | | L-serine ammonia-lyase (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.52 | Sama_1846 | | methyltransferase, putative (RefSeq) | 0.62 | Sama_1325 | | L-serine ammonia-lyase (RefSeq) | low | > 62 |
| Vibrio cholerae E7946 ATCC 55056 | 0.51 | CSW01_05895 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.51 | CSW01_06565 | | L-serine ammonia-lyase | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.49 | MIT1002_02226 | | tRNA (mo5U34)-methyltransferase | 0.63 | MIT1002_02006 | | L-serine dehydratase 1 | low | > 70 |
| Klebsiella michiganensis M5al | 0.49 | BWI76_RS18195 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.53 | BWI76_RS17875 | | L-serine ammonia-lyase | low | > 92 |
| Erwinia tracheiphila SCR3 | 0.48 | LU632_RS13460 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.53 | LU632_RS13185 | sdaA | L-serine ammonia-lyase | low | > 74 |
| Enterobacter asburiae PDN3 | 0.48 | EX28DRAFT_0686 | | tRNA (mo5U34)-methyltransferase | 0.54 | EX28DRAFT_0745 | | L-serine dehydratase, iron-sulfur-dependent, single chain form | low | > 76 |
| Rahnella sp. WP5 | 0.48 | EX31_RS17290 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.54 | EX31_RS24715 | | L-serine ammonia-lyase | low | > 89 |
| Escherichia coli ECOR38 | 0.48 | HEPCGN_04630 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.53 | HEPCGN_17260 | tdcG | L-serine ammonia-lyase | low | > 87 |
| Escherichia coli ECRC98 | 0.48 | JDDGAC_00795 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.53 | JDDGAC_22060 | tdcG | L-serine ammonia-lyase | low | > 86 |
| Escherichia coli BW25113 | 0.48 | b1871 | yecP | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | 0.53 | b4471 | tdcG | L-serine dehydratase 3 (NCBI) | low | > 76 |
| Escherichia coli ECRC100 | 0.48 | OKFHMN_26220 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.53 | OKFHMN_18425 | tdcG | L-serine ammonia-lyase | low | > 80 |
| Escherichia fergusonii Becca | 0.48 | EFB2_02071 | | tRNA U34 carboxymethyltransferase | 0.53 | EFB2_00702 | | L-serine dehydratase TdcG | low | > 86 |
| Escherichia coli BL21 | 0.48 | ECD_01842 | | tRNA (cmo5U34)-carboxymethyltransferase, carboxy-SAM-dependent | 0.53 | ECD_02979 | | L-serine dehydratase 3, anaerobic | low | > 61 |
| Escherichia coli ECRC102 | 0.48 | NIAGMN_01840 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.53 | NIAGMN_16190 | tdcG | L-serine ammonia-lyase | — | — |
| Escherichia coli ECRC101 | 0.48 | MCAODC_19185 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.53 | MCAODC_08940 | tdcG | L-serine ammonia-lyase | low | > 87 |
| Escherichia coli Nissle 1917 | 0.48 | ECOLIN_RS10700 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.53 | ECOLIN_RS17915 | | L-serine ammonia-lyase | — | — |
| Pantoea sp. MT58 | 0.48 | IAI47_08405 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.53 | IAI47_08785 | | L-serine ammonia-lyase | low | > 76 |
| Escherichia coli ECRC99 | 0.48 | KEDOAH_01885 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.53 | KEDOAH_09720 | tdcG | L-serine ammonia-lyase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.48 | OHPLBJKB_01857 | | tRNA U34 carboxymethyltransferase | 0.53 | OHPLBJKB_00588 | | L-serine dehydratase TdcG | low | > 73 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.48 | GFF1652 | | tRNA (5-methoxyuridine) 34 synthase | 0.52 | GFF3206 | | L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) | low | > 78 |
| Escherichia coli ECRC62 | 0.48 | BNILDI_15455 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.53 | BNILDI_01320 | tdcG | L-serine ammonia-lyase | low | > 75 |
| Pseudomonas syringae pv. syringae B728a | 0.48 | Psyr_3947 | | Methyltransferase, putative | 0.58 | Psyr_3522 | | L-serine ammonia-lyase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.48 | Psyr_3947 | | Methyltransferase, putative | 0.58 | Psyr_3522 | | L-serine ammonia-lyase | 0.36 | 44 |
| Dickeya dadantii 3937 | 0.48 | DDA3937_RS10035 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.53 | DDA3937_RS11265 | | L-serine ammonia-lyase | low | > 74 |
| Enterobacter sp. TBS_079 | 0.47 | MPMX20_02776 | | tRNA U34 carboxymethyltransferase | 0.53 | MPMX20_02719 | | L-serine dehydratase 1 | low | > 85 |
| Escherichia coli ECOR27 | 0.47 | NOLOHH_16665 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.53 | NOLOHH_10205 | tdcG | L-serine ammonia-lyase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.47 | HGI48_RS10065 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.53 | HGI48_RS11300 | | L-serine ammonia-lyase | low | > 71 |
| Dickeya dianthicola ME23 | 0.47 | DZA65_RS10475 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.53 | DZA65_RS16005 | | L-serine ammonia-lyase | 0.24 | 55 |
| Serratia liquefaciens MT49 | 0.47 | IAI46_14675 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.53 | IAI46_14795 | | L-serine ammonia-lyase | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.46 | PfGW456L13_4812 | | tRNA (5-methoxyuridine) 34 synthase | 0.66 | PfGW456L13_1867 | | L-serine dehydratase (EC 4.3.1.17) | low | > 87 |
| Pseudomonas putida KT2440 | 0.46 | PP_1440 | | tRNA (mo5U34)-methyltransferase | 0.67 | PP_0987 | | L-serine dehydratase | low | > 96 |
| Pectobacterium carotovorum WPP14 | 0.46 | HER17_RS11890 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.54 | HER17_RS11315 | | L-serine ammonia-lyase | low | > 75 |
| Pseudomonas fluorescens FW300-N1B4 | 0.46 | Pf1N1B4_826 | | tRNA (5-methoxyuridine) 34 synthase | 0.66 | Pf1N1B4_622 | | L-serine dehydratase (EC 4.3.1.17) | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.45 | Psest_3085 | | methyltransferase, putative | 0.65 | Psest_0784 | | L-serine dehydratase, iron-sulfur-dependent, single chain form | low | > 67 |
| Pseudomonas fluorescens FW300-N2E3 | 0.45 | AO353_16015 | | tRNA (mo5U34)-methyltransferase | 0.66 | AO353_03505 | | serine dehydratase | low | > 101 |
| Pseudomonas fluorescens SBW25-INTG | 0.45 | PFLU_RS05290 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.65 | PFLU_RS24005 | | L-serine ammonia-lyase | low | > 109 |
| Pseudomonas sp. RS175 | 0.45 | PFR28_00318 | | tRNA U34 carboxymethyltransferase | 0.66 | PFR28_03384 | | L-serine dehydratase 2 | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.45 | PFLU_RS05290 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.65 | PFLU_RS24005 | | L-serine ammonia-lyase | low | > 109 |
| Pseudomonas simiae WCS417 | 0.45 | PS417_05220 | | tRNA methyltransferase | 0.65 | PS417_22365 | | serine dehydratase | low | > 88 |
| Pseudomonas sp. S08-1 | 0.45 | OH686_05375 | | tRNA (mo5U34)-methyltransferase | 0.65 | OH686_16810 | | L-serine ammonia-lyase | low | > 80 |
| Pseudomonas fluorescens FW300-N2C3 | 0.45 | AO356_06450 | | tRNA (mo5U34)-methyltransferase | 0.66 | AO356_18165 | | serine dehydratase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.45 | Pf6N2E2_3158 | | tRNA (5-methoxyuridine) 34 synthase | 0.66 | Pf6N2E2_5557 | | L-serine ammonia-lyase (EC 4.3.1.17) (from data) | low | > 103 |
Not shown: 1 genomes with orthologs for B158DRAFT_1515 only; 41 genomes with orthologs for B158DRAFT_1339 only