Conservation of cofitness between Atu2554 and Atu3727 in Agrobacterium fabrum C58

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu2554 lysyl-tRNA synthetase 1.0 Atu3727 hypothetical protein 0.36 6
Rhizobium sp. OAE497 0.77 ABIE40_RS18555 EF-P lysine aminoacylase EpmA 0.87 ABIE40_RS15665 YebC/PmpR family DNA-binding transcriptional regulator low > 107
Sinorhizobium meliloti 1021 0.73 SMc00356 lysyl-tRNA synthetase 0.92 SMc03969 hypothetical protein low > 103
Caulobacter crescentus NA1000 0.68 CCNA_00757 lysyl-tRNA synthetase 0.59 CCNA_03352 YebC/PmpR transcriptional regulator low > 66
Caulobacter crescentus NA1000 Δfur 0.68 CCNA_00757 lysyl-tRNA synthetase 0.59 CCNA_03352 YebC/PmpR transcriptional regulator low > 67
Bosea sp. OAE506 0.63 ABIE41_RS00080 EF-P lysine aminoacylase EpmA 0.75 ABIE41_RS09460 YebC/PmpR family DNA-binding transcriptional regulator low > 77
Rhodopseudomonas palustris CGA009 0.54 TX73_012990 EF-P lysine aminoacylase EpmA 0.67 TX73_005640 YebC/PmpR family DNA-binding transcriptional regulator — —
Magnetospirillum magneticum AMB-1 0.49 AMB_RS06525 EF-P lysine aminoacylase GenX 0.58 AMB_RS16265 YebC/PmpR family DNA-binding transcriptional regulator — —
Azospirillum brasilense Sp245 0.48 AZOBR_RS10420 lysyl-tRNA synthetase 0.61 AZOBR_RS09035 transcriptional regulator — —
Azospirillum sp. SherDot2 0.47 MPMX19_00680 Elongation factor P--(R)-beta-lysine ligase 0.61 MPMX19_00695 putative transcriptional regulatory protein low > 112
Rhodospirillum rubrum S1H 0.45 Rru_A1078 tRNA synthetase, class II (D, K and N) (NCBI) 0.60 Rru_A1086 hypothetical protein (RefSeq) — —
Dickeya dianthicola 67-19 0.26 HGI48_RS19055 elongation factor P--(R)-beta-lysine ligase 0.44 HGI48_RS10095 YebC/PmpR family DNA-binding transcriptional regulator low > 71
Dickeya dianthicola ME23 0.26 DZA65_RS20175 elongation factor P--(R)-beta-lysine ligase 0.44 DZA65_RS10510 YebC/PmpR family DNA-binding transcriptional regulator — —
Dickeya dadantii 3937 0.26 DDA3937_RS18960 elongation factor P--(R)-beta-lysine ligase 0.44 DDA3937_RS10065 YebC/PmpR family DNA-binding transcriptional regulator low > 74
Rahnella sp. WP5 0.26 EX31_RS08895 elongation factor P--(R)-beta-lysine ligase 0.42 EX31_RS11685 YebC/PmpR family DNA-binding transcriptional regulator — —
Enterobacter sp. TBS_079 0.26 MPMX20_00438 Elongation factor P--(R)-beta-lysine ligase 0.42 MPMX20_02769 putative transcriptional regulatory protein YebC — —
Enterobacter asburiae PDN3 0.26 EX28DRAFT_3356 EF-P lysine aminoacylase GenX 0.43 EX28DRAFT_0693 DNA-binding regulatory protein, YebC/PmpR family — —
Escherichia coli ECRC62 0.26 BNILDI_06890 epmA elongation factor P--(R)-beta-lysine ligase 0.44 BNILDI_15490 putative transcriptional regulatory protein YebC — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.26 GFF1995 Translation elongation factor P Lys34:lysine transferase 0.44 GFF1645 FIG000859: hypothetical protein YebC — —
Alteromonas macleodii MIT1002 0.26 MIT1002_00683 Elongation factor P--(R)-beta-lysine ligase 0.29 MIT1002_00845 putative transcriptional regulatory protein YeeN low > 70
Escherichia fergusonii Becca 0.25 EFB2_04378 Elongation factor P--(R)-beta-lysine ligase 0.44 EFB2_02078 putative transcriptional regulatory protein YebC — —
Escherichia coli ECRC98 0.25 JDDGAC_15975 epmA elongation factor P--(R)-beta-lysine ligase 0.44 JDDGAC_00830 putative transcriptional regulatory protein YebC — —
Escherichia coli Nissle 1917 0.25 ECOLIN_RS24155 elongation factor P--(R)-beta-lysine ligase 0.44 ECOLIN_RS10380 YebC/PmpR family DNA-binding transcriptional regulator — —
Escherichia coli ECRC101 0.25 OKFHMN_12340 epmA elongation factor P--(R)-beta-lysine ligase 0.44 OKFHMN_26255 putative transcriptional regulatory protein YebC — —
Escherichia coli ECRC102 0.25 NIAGMN_10185 epmA elongation factor P--(R)-beta-lysine ligase 0.44 NIAGMN_01805 putative transcriptional regulatory protein YebC — —
Escherichia coli ECOR38 0.25 HEPCGN_10565 epmA elongation factor P--(R)-beta-lysine ligase 0.44 HEPCGN_04665 putative transcriptional regulatory protein YebC low > 85
Escherichia coli ECRC99 0.25 KEDOAH_15825 epmA elongation factor P--(R)-beta-lysine ligase 0.44 KEDOAH_01850 putative transcriptional regulatory protein YebC — —
Escherichia coli BW25113 0.25 b4155 yjeA putative lysyl-tRNA synthetase (VIMSS) 0.44 b1864 yebC hypothetical protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.25 OHPLBJKB_03885 Elongation factor P--(R)-beta-lysine ligase 0.44 OHPLBJKB_01864 putative transcriptional regulatory protein YebC low > 73
Serratia liquefaciens MT49 0.25 IAI46_01555 elongation factor P--(R)-beta-lysine ligase 0.44 IAI46_14635 YebC/PmpR family DNA-binding transcriptional regulator — —
Vibrio cholerae E7946 ATCC 55056 0.25 CSW01_13420 elongation factor P--(R)-beta-lysine ligase 0.29 CSW01_14085 transcriptional regulator low > 62
Escherichia coli BL21 0.25 ECD_04027 Elongation Factor P Lys34 lysyltransferase 0.44 ECD_01835 UPF0082 family protein — —
Escherichia coli ECRC101 0.25 MCAODC_02850 epmA elongation factor P--(R)-beta-lysine ligase 0.44 MCAODC_19150 putative transcriptional regulatory protein YebC — —
Escherichia coli ECOR27 0.25 NOLOHH_04600 epmA elongation factor P--(R)-beta-lysine ligase 0.44 NOLOHH_16700 putative transcriptional regulatory protein YebC — —
Klebsiella michiganensis M5al 0.25 BWI76_RS02460 elongation factor P lysine(34) lysyltransferase 0.43 BWI76_RS18160 YebC/PmpR family DNA-binding transcriptional regulator — —
Pectobacterium carotovorum WPP14 0.24 HER17_RS02395 elongation factor P--(R)-beta-lysine ligase 0.43 HER17_RS11855 YebC/PmpR family DNA-binding transcriptional regulator — —
Pantoea sp. MT58 0.24 IAI47_17270 elongation factor P--(R)-beta-lysine ligase 0.42 IAI47_08435 YebC/PmpR family DNA-binding transcriptional regulator — —
Erwinia tracheiphila SCR3 0.24 LU632_RS01930 epmA elongation factor P--(R)-beta-lysine ligase 0.41 LU632_RS13425 YebC/PmpR family DNA-binding transcriptional regulator — —
Rhodanobacter denitrificans FW104-10B01 0.23 LRK54_RS17445 EF-P lysine aminoacylase EpmA 0.37 LRK54_RS04920 YebC/PmpR family DNA-binding transcriptional regulator — —
Rhodanobacter denitrificans MT42 0.23 LRK55_RS17665 EF-P lysine aminoacylase EpmA 0.37 LRK55_RS04700 YebC/PmpR family DNA-binding transcriptional regulator — —
Dyella japonica UNC79MFTsu3.2 0.23 ABZR86_RS01880 EF-P lysine aminoacylase EpmA 0.30 ABZR86_RS10850 YebC/PmpR family DNA-binding transcriptional regulator — —
Rhodanobacter sp. FW510-T8 0.23 OKGIIK_07495 epmA EF-P lysine aminoacylase EpmA 0.36 OKGIIK_01830 tACO1 YebC/PmpR family DNA-binding transcriptional regulator — —
Kangiella aquimarina DSM 16071 0.23 B158DRAFT_0986 EF-P lysine aminoacylase GenX 0.40 B158DRAFT_1123 DNA-binding regulatory protein, YebC/PmpR family low > 40
Acinetobacter radioresistens SK82 0.22 MPMX26_02237 Elongation factor P--(R)-beta-lysine ligase 0.44 MPMX26_01851 putative transcriptional regulatory protein YebC — —
Marinobacter adhaerens HP15 0.22 HP15_2512 tRNA synthetase, class II (D, K and N) 0.41 HP15_2043 protein YebC low > 73
Xanthomonas campestris pv. campestris strain 8004 0.22 Xcc-8004.3305.1 Translation elongation factor P Lys34:lysine transferase 0.34 Xcc-8004.1434.1 FIG000859: hypothetical protein YebC — —
Lysobacter sp. OAE881 0.20 ABIE51_RS08895 EF-P lysine aminoacylase EpmA 0.37 ABIE51_RS05035 YebC/PmpR family DNA-binding transcriptional regulator — —

Not shown: 0 genomes with orthologs for Atu2554 only; 55 genomes with orthologs for Atu3727 only