Conservation of cofitness between Atu2113 and Atu2831 in Agrobacterium fabrum C58

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu2113 N-acetylmuramoyl-L-alanine amidase 1.0 Atu2831 glucose inhibited division protein A 0.41 6
Sinorhizobium meliloti 1021 0.72 SMc01854 amidase (AMPD protein) 0.71 SMc02798 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA — —
Bosea sp. OAE506 0.60 ABIE41_RS12525 N-acetylmuramoyl-L-alanine amidase 0.58 ABIE41_RS04685 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG — —
Rhodopseudomonas palustris CGA009 0.51 TX73_018340 N-acetylmuramoyl-L-alanine amidase 0.58 TX73_001530 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 86
Brevundimonas sp. GW460-12-10-14-LB2 0.45 A4249_RS01470 N-acetylmuramoyl-L-alanine amidase 0.55 A4249_RS13705 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG — —
Caulobacter crescentus NA1000 Δfur 0.43 CCNA_02650 N-acetyl-anhydromuramyl-L-alanine amidase 0.58 CCNA_03871 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA low > 67
Caulobacter crescentus NA1000 0.43 CCNA_02650 N-acetyl-anhydromuramyl-L-alanine amidase 0.58 CCNA_03871 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA low > 66
Azospirillum brasilense Sp245 0.35 AZOBR_RS12270 N-acetylmuramoyl-L-alanine amidase 0.56 AZOBR_RS01810 tRNA uridine 5-carboxymethylaminomethyl modification protein low > 97
Magnetospirillum magneticum AMB-1 0.35 AMB_RS04375 N-acetylmuramoyl-L-alanine amidase 0.57 AMB_RS00010 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG — —
Azospirillum sp. SherDot2 0.35 MPMX19_01668 N-acetylmuramoyl-L-alanine amidase AmiD 0.56 MPMX19_02569 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG — —
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_0650 Negative regulator of beta-lactamase expression 0.44 Ga0059261_2205 glucose-inhibited division protein A low > 68
Rhodospirillum rubrum S1H 0.31 Rru_A0960 AmpD (negative regulator of AmpC) (NCBI) 0.53 Rru_A3625 Glucose-inhibited division protein A subfamily (NCBI) — —
Pseudomonas simiae WCS417 0.29 PS417_10290 N-acetylmuramoyl-L-alanine amidase 0.46 PS417_28520 tRNA uridine 5-carboxymethylaminomethyl modification protein — —
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS00430 N-acetylmuramoyl-L-alanine amidase 0.46 PFLU_RS30175 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG — —
Pseudomonas fluorescens SBW25 0.29 PFLU_RS00430 N-acetylmuramoyl-L-alanine amidase 0.46 PFLU_RS30175 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG — —
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_11430 N-acetylmuramoyl-L-alanine amidase 0.46 AO356_11665 tRNA uridine 5-carboxymethylaminomethyl modification protein — —
Erwinia tracheiphila SCR3 0.27 LU632_RS00215 N-acetylmuramoyl-L-alanine amidase 0.45 LU632_RS24815 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG — —
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_1882 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) 0.45 Pf1N1B4_1934 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA — —
Pseudomonas putida KT2440 0.27 PP_0130 1,6-anhydro-N-acetylmuramyl-L-alanine amidase 0.46 PP_0004 tRNA uridine 5-carboxymethylaminomethyl modification enzyme — —
Enterobacter asburiae PDN3 0.27 EX28DRAFT_2084 Negative regulator of beta-lactamase expression 0.46 EX28DRAFT_4017 glucose-inhibited division protein A — —
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_4155 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) 0.46 Pf6N2E2_4203 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA — —
Pseudomonas sp. RS175 0.26 PFR28_04631 N-acetylmuramoyl-L-alanine amidase AmiD 0.46 PFR28_04587 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG — —
Klebsiella michiganensis M5al 0.26 BWI76_RS09535 N-acetylmuramoyl-L-alanine amidase amid 0.46 BWI76_RS00230 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA — —
Enterobacter sp. TBS_079 0.26 MPMX20_01510 N-acetylmuramoyl-L-alanine amidase AmiD 0.46 MPMX20_04626 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG low > 85
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_10965 N-acetylmuramoyl-L-alanine amidase 0.45 AO353_10445 tRNA uridine 5-carboxymethylaminomethyl modification protein low > 101
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_0265 N-acetylmuramoyl-L-alanine amidase, family 2 0.46 Psyr_5132 Glucose-inhibited division protein A subfamily low > 86
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_587 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) 0.45 PfGW456L13_671 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_0265 N-acetylmuramoyl-L-alanine amidase, family 2 0.46 Psyr_5132 Glucose-inhibited division protein A subfamily low > 86
Rahnella sp. WP5 0.25 EX31_RS18620 N-acetylmuramoyl-L-alanine amidase 0.46 EX31_RS06140 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 89
Pantoea sp. MT58 0.24 IAI47_12980 N-acetylmuramoyl-L-alanine amidase 0.45 IAI47_00300 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 76
Serratia liquefaciens MT49 0.24 IAI46_17125 N-acetylmuramoyl-L-alanine amidase 0.46 IAI46_25110 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 86
Pseudomonas sp. S08-1 0.24 OH686_12170 N-acetylmuramoyl-L-alanine amidase or 1,6-anhydro-N-acetylmuramyl-L-alanine amidase 0.46 OH686_12660 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA — —
Dickeya dianthicola 67-19 0.23 HGI48_RS09540 N-acetylmuramoyl-L-alanine amidase 0.47 HGI48_RS21380 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 71
Dickeya dianthicola ME23 0.23 DZA65_RS09850 N-acetylmuramoyl-L-alanine amidase 0.46 DZA65_RS22360 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 75
Pseudomonas stutzeri RCH2 0.23 Psest_0189 Negative regulator of beta-lactamase expression 0.45 Psest_4365 glucose-inhibited division protein A — —
Rhodanobacter sp. FW510-T8 0.22 OKGIIK_12400 N-acetylmuramoyl-L-alanine amidase 0.44 OKGIIK_13725 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG low > 52

Not shown: 1 genomes with orthologs for Atu2113 only; 63 genomes with orthologs for Atu2831 only