Conservation of cofitness between Atu0298 and Atu2015 in Agrobacterium fabrum C58

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0298 orotidine 5 1.0 Atu2015 aminotransferase 0.88 20
Rhizobium sp. OAE497 0.79 ABIE40_RS01345 orotidine-5'-phosphate decarboxylase 0.80 ABIE40_RS11345 PLP-dependent aminotransferase family protein — —
Sinorhizobium meliloti 1021 0.75 SMc00412 orotidine 5'-phosphate decarboxylase 0.78 SMc04323 aminotransferase low > 103
Bosea sp. OAE506 0.53 ABIE41_RS00050 orotidine-5'-phosphate decarboxylase 0.23 ABIE41_RS13895 PLP-dependent aminotransferase family protein low > 77
Caulobacter crescentus NA1000 Δfur 0.44 CCNA_00104 orotidine 5'-phosphate decarboxylase 0.53 CCNA_02244 aminotransferase class I family protein low > 67
Caulobacter crescentus NA1000 0.44 CCNA_00104 orotidine 5'-phosphate decarboxylase 0.53 CCNA_02244 aminotransferase class I family protein low > 66
Dickeya dadantii 3937 0.31 DDA3937_RS12525 orotidine-5'-phosphate decarboxylase 0.26 DDA3937_RS00685 PLP-dependent aminotransferase family protein low > 74
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_01670 orotidine 5'-phosphate decarboxylase 0.27 AO353_02295 GntR family transcriptional regulator — —
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_2056 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) 0.26 PfGW456L13_4175 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) — —
Pseudomonas fluorescens SBW25 0.30 PFLU_RS09110 orotidine-5'-phosphate decarboxylase 0.29 PFLU_RS21355 PLP-dependent aminotransferase family protein — —
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS09110 orotidine-5'-phosphate decarboxylase 0.29 PFLU_RS21355 PLP-dependent aminotransferase family protein — —
Dickeya dianthicola 67-19 0.30 HGI48_RS12580 orotidine-5'-phosphate decarboxylase 0.26 HGI48_RS20705 PLP-dependent aminotransferase family protein low > 71
Dickeya dianthicola ME23 0.30 DZA65_RS13030 orotidine-5'-phosphate decarboxylase 0.27 DZA65_RS21720 PLP-dependent aminotransferase family protein low > 75
Erwinia tracheiphila SCR3 0.30 LU632_RS12500 pyrF orotidine-5'-phosphate decarboxylase 0.08 LU632_RS00055 valine--pyruvate transaminase low > 74
Pectobacterium carotovorum WPP14 0.30 HER17_RS09390 orotidine-5'-phosphate decarboxylase 0.25 HER17_RS00520 PLP-dependent aminotransferase family protein low > 75
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_1836 orotidine-5'-phosphate decarboxylase 0.29 Psyr_1841 Aminotransferase, class I and II — —
Pseudomonas sp. RS175 0.29 PFR28_03064 'Orotidine 5'-phosphate decarboxylase' transl_table=11 0.26 PFR28_03135 2-aminoadipate transaminase — —
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_514 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) 0.27 Pf1N1B4_3771 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_1836 orotidine-5'-phosphate decarboxylase 0.29 Psyr_1841 Aminotransferase, class I and II — —
Klebsiella michiganensis M5al 0.29 BWI76_RS11965 orotidine-5'-phosphate decarboxylase 0.27 BWI76_RS24235 Branched-chain-amino-acid transaminase (EC 2.6.1.42) (from data) low > 92
Enterobacter asburiae PDN3 0.29 EX28DRAFT_0954 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) 0.27 EX28DRAFT_2740 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs — —
Pseudomonas simiae WCS417 0.29 PS417_09055 orotidine 5'-phosphate decarboxylase 0.29 PS417_19385 GntR family transcriptional regulator — —
Rhodospirillum rubrum S1H 0.29 Rru_A3424 Orotidine-5'-phosphate decarboxylase (NCBI) 0.53 Rru_A3004 Aminotransferase, class I and II (NCBI) low > 58
Azospirillum brasilense Sp245 0.29 AZOBR_RS03135 orotidine 5'-phosphate decarboxylase 0.50 AZOBR_RS06555 Branched-chain-amino-acid transaminase (EC 2.6.1.42) (from data) low > 97
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_5887 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) 0.26 Pf6N2E2_5813 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) — —
Rahnella sp. WP5 0.29 EX31_RS09855 orotidine-5'-phosphate decarboxylase 0.27 EX31_RS14780 PLP-dependent aminotransferase family protein low > 89
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_19850 orotidine 5'-phosphate decarboxylase 0.26 AO356_19495 GntR family transcriptional regulator — —
Xanthomonas campestris pv. campestris strain 8004 0.29 Xcc-8004.5259.1 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) 0.37 Xcc-8004.2917.1 Valine--pyruvate aminotransferase (EC 2.6.1.66) — —
Pseudomonas sp. S08-1 0.28 OH686_00580 Orotidine 5'-phosphate decarboxylase 0.29 OH686_00615 Aspartate aminotransferase (AspB-4) low > 80
Pseudomonas stutzeri RCH2 0.28 Psest_1714 orotidine 5'-phosphate decarboxylase, subfamily 1 0.28 Psest_1990 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs — —
Enterobacter sp. TBS_079 0.28 MPMX20_02494 Orotidine 5'-phosphate decarboxylase 0.26 MPMX20_03530 2-aminoadipate transaminase low > 85
Serratia liquefaciens MT49 0.28 IAI46_13915 orotidine-5'-phosphate decarboxylase 0.26 IAI46_00985 PLP-dependent aminotransferase family protein low > 86
Desulfovibrio vulgaris Miyazaki F 0.26 DvMF_1137 orotidine 5'-phosphate decarboxylase (RefSeq) 0.33 DvMF_3003 putative transcriptional regulator, GntR family (RefSeq) low > 51
Azospirillum sp. SherDot2 0.26 MPMX19_02208 Orotidine 5'-phosphate decarboxylase 0.49 MPMX19_01777 2-aminoadipate transaminase — —
Desulfovibrio vulgaris Hildenborough JW710 0.24 DVU0901 pyrF orotidine 5`-phosphate decarboxylase (TIGR) 0.30 DVU2364 aminotransferase, classes I and II (TIGR) — —

Not shown: 33 genomes with orthologs for Atu0298 only; 19 genomes with orthologs for Atu2015 only