Conservation of cofitness between Atu0888 and Atu1891 in Agrobacterium fabrum C58

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0888 transcriptional regulator, MerR family 1.0 Atu1891 cobalamin biosynthesis protein 0.18 17
Sinorhizobium meliloti 1021 0.72 SMc00109 transcriptional regulator 0.44 SMc04215 cobalamin synthase — —
Bosea sp. OAE506 0.52 ABIE41_RS05340 helix-turn-helix domain-containing protein 0.25 ABIE41_RS21250 adenosylcobinamide-GDP ribazoletransferase — —
Phaeobacter inhibens DSM 17395 0.50 PGA1_262p00460 transcriptional regulator, MerR family 0.25 PGA1_c07560 putative cobalamin-5-phosphate synthase — —
Dinoroseobacter shibae DFL-12 0.50 Dshi_3961 transcriptional regulator, MerR family (RefSeq) 0.21 Dshi_0787 cobalamin-5-phosphate synthase CobS (RefSeq) — —
Azospirillum sp. SherDot2 0.48 MPMX19_06374 HTH-type transcriptional regulator HmrR 0.17 MPMX19_02008 Adenosylcobinamide-GDP ribazoletransferase — —
Rhizobium sp. OAE497 0.47 ABIE40_RS15545 helix-turn-helix domain-containing protein 0.37 ABIE40_RS10725 adenosylcobinamide-GDP ribazoletransferase low > 107
Rhodospirillum rubrum S1H 0.45 Rru_A1026 Transcriptional Regulator, MerR family (NCBI) 0.19 Rru_A0668 Cobalamin-5-phosphate synthase CobS (NCBI) low > 58
Rhodopseudomonas palustris CGA009 0.45 TX73_016860 helix-turn-helix domain-containing protein 0.16 TX73_006455 adenosylcobinamide-GDP ribazoletransferase low > 86
Sphingomonas koreensis DSMZ 15582 0.43 Ga0059261_3027 Predicted transcriptional regulators 0.13 Ga0059261_0627 cobalamin-5'-phosphate synthase (EC 2.7.8.26) low > 68
Magnetospirillum magneticum AMB-1 0.42 AMB_RS05180 MerR family DNA-binding transcriptional regulator 0.19 AMB_RS02800 adenosylcobinamide-GDP ribazoletransferase — —
Azospirillum brasilense Sp245 0.38 AZOBR_RS27570 MerR family transcriptional regulator 0.20 AZOBR_RS03450 cobalamin synthase low > 97
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_05540 heavy metal-responsive transcriptional regulator 0.13 OKGIIK_05520 adenosylcobinamide-GDP ribazoletransferase low > 52
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS01745 heavy metal-responsive transcriptional regulator 0.15 ABZR86_RS10880 adenosylcobinamide-GDP ribazoletransferase low > 74
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_02296 transcriptional regulator, MerR family 0.17 H281DRAFT_00140 cobalamin-5'-phosphate synthase low > 103
Shewanella sp. ANA-3 0.33 Shewana3_4323 MerR family transcriptional regulator (RefSeq) 0.19 Shewana3_3277 cobS cobalamin synthase (RefSeq) low > 73
Escherichia coli Nissle 1917 0.33 ECOLIN_RS18895 Zn(2+)-responsive transcriptional regulator 0.20 ECOLIN_RS11625 adenosylcobinamide-GDP ribazoletransferase — —
Escherichia coli ECRC98 0.33 JDDGAC_21130 zntR Zn(2+)-responsive transcriptional regulator 0.20 JDDGAC_29260 cobS adenosylcobinamide-GDP ribazoletransferase — —
Escherichia coli ECRC99 0.33 KEDOAH_10640 zntR Zn(2+)-responsive transcriptional regulator 0.20 KEDOAH_02980 cobS adenosylcobinamide-GDP ribazoletransferase — —
Escherichia coli BW25113 0.33 b3292 zntR zinc-responsive transcriptional regulator (NCBI) 0.20 b1992 cobS cobalamin synthase (NCBI) low > 76
Escherichia fergusonii Becca 0.33 EFB2_00531 HTH-type transcriptional regulator ZntR 0.20 EFB2_01897 Adenosylcobinamide-GDP ribazoletransferase low > 86
Escherichia coli ECRC102 0.33 NIAGMN_15270 zntR Zn(2+)-responsive transcriptional regulator 0.20 NIAGMN_22635 cobS adenosylcobinamide-GDP ribazoletransferase — —
Escherichia coli ECRC101 0.33 OKFHMN_17500 zntR Zn(2+)-responsive transcriptional regulator 0.20 OKFHMN_25130 cobS adenosylcobinamide-GDP ribazoletransferase — —
Escherichia coli ECRC101 0.33 MCAODC_08030 zntR Zn(2+)-responsive transcriptional regulator 0.20 MCAODC_20260 cobS adenosylcobinamide-GDP ribazoletransferase — —
Escherichia coli ECRC62 0.33 BNILDI_02220 zntR Zn(2+)-responsive transcriptional regulator 0.20 BNILDI_14870 cobS adenosylcobinamide-GDP ribazoletransferase — —
Escherichia coli BL21 0.33 ECD_03143 zntA gene transcriptional activator 0.20 ECD_01901 cobalamin synthase low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_00411 HTH-type transcriptional regulator ZntR 0.20 OHPLBJKB_01716 Adenosylcobinamide-GDP ribazoletransferase low > 73
Escherichia coli ECOR27 0.33 NOLOHH_09300 zntR Zn(2+)-responsive transcriptional regulator 0.20 NOLOHH_16040 cobS adenosylcobinamide-GDP ribazoletransferase low > 57
Escherichia coli ECOR38 0.33 HEPCGN_16330 zntR Zn(2+)-responsive transcriptional regulator 0.20 HEPCGN_03465 cobS adenosylcobinamide-GDP ribazoletransferase low > 85
Ralstonia sp. UNC404CL21Col 0.32 ABZR87_RS22375 Cd(II)/Pb(II)-responsive transcriptional regulator 0.18 ABZR87_RS00070 adenosylcobinamide-GDP ribazoletransferase low > 80
Ralstonia solanacearum GMI1000 0.32 RS_RS18685 Cd(II)/Pb(II)-responsive transcriptional regulator 0.18 RS_RS12030 adenosylcobinamide-GDP ribazoletransferase low > 80
Ralstonia solanacearum UW163 0.32 UW163_RS17335 Cd(II)/Pb(II)-responsive transcriptional regulator 0.17 UW163_RS09195 adenosylcobinamide-GDP ribazoletransferase — —
Ralstonia solanacearum IBSBF1503 0.32 RALBFv3_RS21850 Cd(II)/Pb(II)-responsive transcriptional regulator 0.17 RALBFv3_RS04475 adenosylcobinamide-GDP ribazoletransferase low > 76
Ralstonia solanacearum PSI07 0.32 RPSI07_RS01310 Cd(II)/Pb(II)-responsive transcriptional regulator 0.18 RPSI07_RS12895 adenosylcobinamide-GDP ribazoletransferase low > 81
Rahnella sp. WP5 0.32 EX31_RS16005 Zn(2+)-responsive transcriptional regulator 0.18 EX31_RS09930 adenosylcobinamide-GDP ribazoletransferase low > 89
Klebsiella michiganensis M5al 0.29 BWI76_RS25700 heavy metal-responsive transcriptional regulator 0.18 BWI76_RS18750 adenosylcobinamide-GDP ribazoletransferase — —
Vibrio cholerae E7946 ATCC 55056 0.29 CSW01_01430 Zn(2+)-responsive transcriptional regulator 0.21 CSW01_06265 adenosylcobinamide-GDP ribazoletransferase low > 62
Fusobacterium nucleatum SB010 0.21 HUW76_10055 MerR family transcriptional regulator 0.22 HUW76_05620 adenosylcobinamide-GDP ribazoletransferase low > 35

Not shown: 17 genomes with orthologs for Atu0888 only; 35 genomes with orthologs for Atu1891 only