Conservation of cofitness between Atu1624 and Atu1778 in Agrobacterium fabrum C58

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1624 transcriptional regulator, TetR family 1.0 Atu1778 transcription-repair coupling factor 0.27 1
Enterobacter sp. TBS_079 0.83 MPMX20_01217 hypothetical protein 0.31 MPMX20_01795 Transcription-repair-coupling factor low > 85
Cupriavidus basilensis FW507-4G11 0.82 RR42_RS16415 TetR family transcriptional regulator 0.28 RR42_RS07845 transcription-repair coupling factor low > 128
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_2038 Transcriptional regulator, TetR family 0.32 Pf6N2E2_2278 Transcription-repair coupling factor low > 103
Paraburkholderia bryophila 376MFSha3.1 0.81 H281DRAFT_05986 transcriptional regulator, TetR family 0.28 H281DRAFT_00880 transcription-repair coupling factor low > 103
Pseudomonas fluorescens FW300-N1B4 0.81 Pf1N1B4_4957 Transcriptional regulator, TetR family 0.25 Pf1N1B4_3916 Transcription-repair coupling factor low > 87
Pseudomonas sp. RS175 0.81 PFR28_00312 hypothetical protein 0.25 PFR28_01123 Transcription-repair-coupling factor low > 88
Dickeya dianthicola 67-19 0.80 HGI48_RS11965 TetR/AcrR family transcriptional regulator 0.31 HGI48_RS13065 transcription-repair coupling factor low > 71
Pseudomonas fluorescens FW300-N2C3 0.79 AO356_06510 TetR family transcriptional regulator 0.32 AO356_02270 transcription-repair coupling factor low > 104
Ralstonia sp. UNC404CL21Col 0.77 ABZR87_RS16820 TetR/AcrR family transcriptional regulator 0.29 ABZR87_RS13240 transcription-repair coupling factor low > 80
Pseudomonas putida KT2440 0.23 PP_1515 Transcriptional regulator, tetR family 0.26 PP_2148 transcription-repair coupling factor low > 96
Lysobacter sp. OAE881 0.22 ABIE51_RS17605 TetR/AcrR family transcriptional regulator 0.31 ABIE51_RS14320 transcription-repair coupling factor low > 62
Pseudomonas fluorescens GW456-L13 0.22 PfGW456L13_4732 Transcriptional regulator, TetR family 0.25 PfGW456L13_4027 Transcription-repair coupling factor low > 87
Pseudomonas stutzeri RCH2 0.21 Psest_1564 Transcriptional regulator 0.26 Psest_1653 transcription-repair coupling factor (mfd) — —
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS06175 TetR/AcrR family transcriptional regulator 0.31 PFLU_RS07710 transcription-repair coupling factor low > 109
Pseudomonas simiae WCS417 0.21 PS417_06105 TetR family transcriptional regulator 0.32 PS417_07635 transcription-repair coupling factor low > 88
Pseudomonas fluorescens SBW25 0.21 PFLU_RS06175 TetR/AcrR family transcriptional regulator 0.31 PFLU_RS07710 transcription-repair coupling factor low > 109
Pseudomonas fluorescens FW300-N2E3 0.21 AO353_16355 TetR family transcriptional regulator 0.32 AO353_00435 transcription-repair coupling factor low > 101
Xanthomonas campestris pv. campestris strain 8004 0.19 Xcc-8004.1045.1 hypothetical protein 0.30 Xcc-8004.1775.1 Transcription-repair coupling factor low > 74
Acidovorax sp. GW101-3H11 0.18 Ac3H11_620 Transcriptional regulator, TetR family 0.30 Ac3H11_328 Transcription-repair coupling factor low > 79
Acinetobacter radioresistens SK82 0.16 MPMX26_01288 hypothetical protein 0.28 MPMX26_01319 Transcription-repair-coupling factor low > 36
Dyella japonica UNC79MFTsu3.2 0.16 ABZR86_RS17225 TetR/AcrR family transcriptional regulator 0.31 ABZR86_RS21210 transcription-repair coupling factor low > 74
Shewanella sp. ANA-3 0.16 Shewana3_1297 TetR family transcriptional regulator (RefSeq) 0.29 Shewana3_2289 transcription-repair coupling factor (RefSeq) low > 73
Shewanella oneidensis MR-1 0.14 SO3277 transcriptional regulator, TetR family (NCBI ptt file) 0.30 SO2255 mfd transcription-repair coupling factor (NCBI ptt file) low > 76
Ralstonia solanacearum UW163 0.14 UW163_RS21900 TetR/AcrR family transcriptional regulator 0.29 UW163_RS14755 transcription-repair coupling factor — —
Ralstonia solanacearum IBSBF1503 0.14 RALBFv3_RS17245 TetR/AcrR family transcriptional regulator 0.29 RALBFv3_RS01445 transcription-repair coupling factor low > 76
Brevundimonas sp. GW460-12-10-14-LB2 0.14 A4249_RS14980 TetR/AcrR family transcriptional regulator 0.52 A4249_RS04775 transcription-repair coupling factor low > 48

Not shown: 0 genomes with orthologs for Atu1624 only; 66 genomes with orthologs for Atu1778 only