Conservation of cofitness between Atu0142 and Atu1364 in Agrobacterium fabrum C58

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0142 cytochrome o ubiquinol oxidase subunit II 1.0 Atu1364 ATP-dependent Clp protease, ATP-binding subunit 0.46 7
Sinorhizobium meliloti 1021 0.64 SM_b21487 cytochrome o ubiquinol oxidase subunit II 0.82 SMc02109 ATP-dependent Clp protease ATP-binding subunit protein — —
Variovorax sp. OAS795 0.60 ABID97_RS07640 ubiquinol oxidase subunit II 0.52 ABID97_RS16910 ATP-dependent Clp protease ATP-binding subunit ClpA low > 91
Ralstonia sp. UNC404CL21Col 0.58 ABZR87_RS12895 ubiquinol oxidase subunit II 0.53 ABZR87_RS00435 ATP-dependent Clp protease ATP-binding subunit ClpA low > 80
Cupriavidus basilensis FW507-4G11 0.57 RR42_RS22210 cytochrome O ubiquinol oxidase 0.52 RR42_RS17105 Clp protease ClpX low > 128
Caulobacter crescentus NA1000 Δfur 0.57 CCNA_01851 quinol cytochrome oxidase polypeptide II 0.67 CCNA_02553 ATP-dependent clp protease ATP-binding subunit ClpA low > 67
Caulobacter crescentus NA1000 0.57 CCNA_01851 quinol cytochrome oxidase polypeptide II 0.67 CCNA_02553 ATP-dependent clp protease ATP-binding subunit ClpA low > 66
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS12320 cytochrome O ubiquinol oxidase 0.54 HSERO_RS07030 ATP-dependent Clp protease ATP-binding protein — —
Acidovorax sp. GW101-3H11 0.56 Ac3H11_3141 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.52 Ac3H11_2456 ATP-dependent Clp protease ATP-binding subunit ClpA low > 79
Dyella japonica UNC79MFTsu3.2 0.56 ABZR86_RS07625 ubiquinol oxidase subunit II 0.54 ABZR86_RS02200 ATP-dependent Clp protease ATP-binding subunit ClpA low > 74
Lysobacter sp. OAE881 0.53 ABIE51_RS09765 ubiquinol oxidase subunit II 0.53 ABIE51_RS11490 ATP-dependent Clp protease ATP-binding subunit ClpA low > 62
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS24915 ubiquinol oxidase subunit II 0.53 BPHYT_RS15710 ATP-dependent Clp protease ATP-binding protein low > 109
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS13340 ubiquinol oxidase subunit II 0.52 QEN71_RS03005 ATP-dependent Clp protease ATP-binding subunit ClpA low > 153
Dickeya dianthicola ME23 0.43 DZA65_RS05985 cytochrome o ubiquinol oxidase subunit II 0.52 DZA65_RS09885 ATP-dependent Clp protease ATP-binding subunit ClpA low > 75
Dickeya dadantii 3937 0.42 DDA3937_RS05615 cytochrome o ubiquinol oxidase subunit II 0.52 DDA3937_RS09560 ATP-dependent Clp protease ATP-binding subunit ClpA low > 74
Dickeya dianthicola 67-19 0.42 HGI48_RS05660 cytochrome o ubiquinol oxidase subunit II 0.52 HGI48_RS09575 ATP-dependent Clp protease ATP-binding subunit ClpA low > 71
Erwinia tracheiphila SCR3 0.42 LU632_RS18375 cyoA cytochrome o ubiquinol oxidase subunit II 0.51 LU632_RS09705 clpA ATP-dependent Clp protease ATP-binding subunit ClpA — —
Shewanella loihica PV-4 0.42 Shew_0366 ubiquinol oxidase, subunit II (RefSeq) 0.52 Shew_1566 ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) low > 60
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_15450 ubiquinol oxidase subunit II 0.52 AO353_27675 ATP-dependent Clp protease ATP-binding subunit ClpA low > 101
Klebsiella michiganensis M5al 0.40 BWI76_RS06495 cytochrome ubiquinol oxidase subunit II 0.53 BWI76_RS09615 ATP-dependent Clp protease ATP-binding subunit ClpA low > 92
Escherichia fergusonii Becca 0.40 EFB2_03625 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.53 EFB2_03179 ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Escherichia coli BL21 0.40 ECD_00383 cytochrome o ubiquinol oxidase subunit II 0.53 ECD_00887 ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity low > 60
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF4346 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.52 GFF4901 ATP-dependent Clp protease ATP-binding subunit ClpA low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_03241 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.53 OHPLBJKB_02786 ATP-dependent Clp protease ATP-binding subunit ClpA low > 73
Escherichia coli ECOR27 0.40 NOLOHH_01295 cyoA cytochrome o ubiquinol oxidase subunit II 0.53 NOLOHH_22180 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 57
Escherichia coli Nissle 1917 0.40 ECOLIN_RS02595 cytochrome o ubiquinol oxidase subunit II 0.53 ECOLIN_RS04695 ATP-dependent Clp protease ATP-binding subunit ClpA low > 52
Escherichia coli BW25113 0.40 b0432 cyoA cytochrome o ubiquinol oxidase subunit II (NCBI) 0.53 b0882 clpA ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity (NCBI) low > 76
Escherichia coli ECRC62 0.40 BNILDI_22710 cyoA cytochrome o ubiquinol oxidase subunit II 0.53 BNILDI_20435 clpA ATP-dependent Clp protease ATP-binding subunit ClpA — —
Escherichia coli ECOR38 0.40 HEPCGN_06975 cyoA cytochrome o ubiquinol oxidase subunit II 0.53 HEPCGN_22900 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 85
Escherichia coli ECRC101 0.39 OKFHMN_08360 cyoA cytochrome o ubiquinol oxidase subunit II 0.53 OKFHMN_05785 clpA ATP-dependent Clp protease ATP-binding subunit ClpA — —
Escherichia coli ECRC102 0.39 NIAGMN_06415 cyoA cytochrome o ubiquinol oxidase subunit II 0.53 NIAGMN_03825 clpA ATP-dependent Clp protease ATP-binding subunit ClpA — —
Escherichia coli ECRC98 0.39 JDDGAC_12015 cyoA cytochrome o ubiquinol oxidase subunit II 0.53 JDDGAC_09420 clpA ATP-dependent Clp protease ATP-binding subunit ClpA — —
Escherichia coli ECRC101 0.39 MCAODC_27585 cyoA cytochrome o ubiquinol oxidase subunit II 0.53 MCAODC_25000 clpA ATP-dependent Clp protease ATP-binding subunit ClpA — —
Escherichia coli ECRC99 0.39 KEDOAH_19605 cyoA cytochrome o ubiquinol oxidase subunit II 0.53 KEDOAH_22125 clpA ATP-dependent Clp protease ATP-binding subunit ClpA — —
Enterobacter asburiae PDN3 0.39 EX28DRAFT_2539 cytochrome o ubiquinol oxidase subunit II 0.52 EX28DRAFT_2050 ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) low > 76
Enterobacter sp. TBS_079 0.39 MPMX20_01023 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.52 MPMX20_01544 ATP-dependent Clp protease ATP-binding subunit ClpA low > 85
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_03426 cytochrome bo3 quinol oxidase subunit 2 (EC 1.10.3.-) 0.53 H281DRAFT_04082 ATP-dependent Clp protease ATP-binding subunit ClpA low > 103
Serratia liquefaciens MT49 0.39 IAI46_04985 cytochrome o ubiquinol oxidase subunit II 0.51 IAI46_08515 ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Ralstonia solanacearum GMI1000 0.38 RS_RS14610 ubiquinol oxidase subunit II 0.53 RS_RS12370 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Rahnella sp. WP5 0.37 EX31_RS22220 cytochrome o ubiquinol oxidase subunit II 0.52 EX31_RS18560 ATP-dependent Clp protease ATP-binding subunit ClpA 0.63 70

Not shown: 0 genomes with orthologs for Atu0142 only; 49 genomes with orthologs for Atu1364 only