Conservation of cofitness between AO356_14785 and AO356_00985 in Pseudomonas fluorescens FW300-N2C3

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2C3 1.0 AO356_14785 ABC-ATPase UvrA 1.0 AO356_00985 deoxyribonuclease 0.61 11
Pseudomonas fluorescens FW300-N2E2 1.00 Pf6N2E2_4888 Excinuclease ABC subunit A 0.99 Pf6N2E2_158 Endonuclease I precursor (EC 3.1.21.1) low > 103
Pseudomonas sp. RS175 0.99 PFR28_03974 UvrABC system protein A 0.97 PFR28_02739 Extracellular deoxyribonuclease low > 88
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_2611 Excinuclease ABC subunit A 0.91 Pf1N1B4_6039 Endonuclease I precursor (EC 3.1.21.1) 0.38 20
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_1283 Excinuclease ABC subunit A 0.93 PfGW456L13_3916 Endonuclease I precursor (EC 3.1.21.1) 0.35 23
Pseudomonas fluorescens FW300-N2E3 0.97 AO353_06855 ABC-ATPase UvrA 0.88 AO353_20795 deoxyribonuclease low > 101
Pseudomonas simiae WCS417 0.97 PS417_25395 excinuclease ABC subunit A 0.88 PS417_18420 deoxyribonuclease low > 88
Pseudomonas fluorescens SBW25 0.97 PFLU_RS27025 excinuclease ABC subunit UvrA 0.89 PFLU_RS20395 deoxyribonuclease low > 109
Pseudomonas fluorescens SBW25-INTG 0.97 PFLU_RS27025 excinuclease ABC subunit UvrA 0.89 PFLU_RS20395 deoxyribonuclease low > 109
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_4520 Excinuclease ABC subunit A 0.85 Psyr_2148 Deoxyribonuclease I low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_4520 Excinuclease ABC subunit A 0.85 Psyr_2148 Deoxyribonuclease I low > 86
Pseudomonas putida KT2440 0.93 PP_0483 excinuclease (uvrABC system protein A) 0.84 PP_2451 extracellular DNA endonuclease — —
Pseudomonas sp. S08-1 0.92 OH686_15495 excinuclease ABC subunit A 0.69 OH686_20125 Endonuclease I precursor low > 80
Pseudomonas stutzeri RCH2 0.90 Psest_3576 excinuclease ABC, A subunit 0.63 Psest_1274 Endonuclease I low > 67
Escherichia coli Nissle 1917 0.77 ECOLIN_RS23485 excinuclease ABC subunit UvrA 0.46 ECOLIN_RS16385 deoxyribonuclease I low > 55
Escherichia fergusonii Becca 0.77 EFB2_04533 UvrABC system protein A 0.45 EFB2_00957 Endonuclease-1 low > 86
Escherichia coli ECOR38 0.77 HEPCGN_11510 uvrA excinuclease ABC subunit UvrA 0.45 HEPCGN_18590 endA deoxyribonuclease I low > 87
Escherichia coli ECRC98 0.77 JDDGAC_16530 uvrA excinuclease ABC subunit UvrA 0.45 JDDGAC_22915 endA deoxyribonuclease I low > 86
Escherichia coli ECRC101 0.77 MCAODC_03405 uvrA excinuclease ABC subunit UvrA 0.45 MCAODC_09805 endA deoxyribonuclease I low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF1429 Excinuclease ABC subunit A 0.46 GFF3047 Endonuclease I precursor (EC 3.1.21.1) @ Extracellular deoxyribonuclease Dns (EC 3.1.21.-) 0.53 33
Escherichia coli ECRC99 0.77 KEDOAH_15255 uvrA excinuclease ABC subunit UvrA 0.45 KEDOAH_08855 endA deoxyribonuclease I — —
Escherichia coli ECRC102 0.77 NIAGMN_10740 uvrA excinuclease ABC subunit UvrA 0.45 NIAGMN_17050 endA deoxyribonuclease I — —
Rahnella sp. WP5 0.77 EX31_RS11990 excinuclease ABC subunit UvrA 0.44 EX31_RS02655 deoxyribonuclease I low > 89
Escherichia coli ECRC62 0.77 BNILDI_06380 uvrA excinuclease ABC subunit UvrA 0.45 BNILDI_09735 endA deoxyribonuclease I low > 75
Escherichia coli BW25113 0.77 b4058 uvrA excinuclease ABC subunit A (NCBI) 0.45 b2945 endA DNA-specific endonuclease I (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.77 OHPLBJKB_03983 UvrABC system protein A 0.45 OHPLBJKB_00773 Endonuclease-1 low > 73
Escherichia coli ECOR27 0.77 NOLOHH_05145 uvrA excinuclease ABC subunit UvrA 0.45 NOLOHH_11155 endA deoxyribonuclease I low > 75
Escherichia coli ECRC100 0.77 OKFHMN_12895 uvrA excinuclease ABC subunit UvrA 0.45 OKFHMN_19285 endA deoxyribonuclease I low > 80
Escherichia coli BL21 0.77 ECD_03930 ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC 0.45 ECD_02775 DNA-specific endonuclease I low > 61
Klebsiella michiganensis M5al 0.77 BWI76_RS01950 excinuclease ABC subunit A 0.47 BWI76_RS24065 deoxyribonuclease I low > 92
Dickeya dadantii 3937 0.77 DDA3937_RS17605 excinuclease ABC subunit UvrA 0.45 DDA3937_RS18550 deoxyribonuclease I low > 74
Dickeya dianthicola 67-19 0.77 HGI48_RS17610 excinuclease ABC subunit UvrA 0.44 HGI48_RS18485 deoxyribonuclease I low > 71
Dickeya dianthicola ME23 0.77 DZA65_RS18735 excinuclease ABC subunit UvrA 0.45 DZA65_RS19620 deoxyribonuclease I low > 75
Enterobacter sp. TBS_079 0.77 MPMX20_00276 UvrABC system protein A 0.48 MPMX20_03803 Endonuclease-1 low > 85
Pectobacterium carotovorum WPP14 0.76 HER17_RS03550 excinuclease ABC subunit UvrA 0.45 HER17_RS02645 deoxyribonuclease I low > 75
Enterobacter asburiae PDN3 0.76 EX28DRAFT_4246 excinuclease ABC, A subunit 0.47 EX28DRAFT_2983 Endonuclease I low > 76
Serratia liquefaciens MT49 0.76 IAI46_22905 excinuclease ABC subunit UvrA 0.47 IAI46_21380 deoxyribonuclease I low > 86
Vibrio cholerae E7946 ATCC 55056 0.76 CSW01_02080 UvrABC system protein A 0.48 CSW01_02500 deoxyribonuclease low > 62
Pantoea sp. MT58 0.76 IAI47_17815 excinuclease ABC subunit UvrA 0.47 IAI47_03625 deoxyribonuclease I low > 76
Shewanella amazonensis SB2B 0.75 Sama_0514 excinuclease ABC, A subunit (RefSeq) 0.47 Sama_0576 deoxyribonuclease I (RefSeq) low > 62
Shewanella oneidensis MR-1 0.75 SO4030 uvrA excinuclease ABC, A subunit (NCBI ptt file) 0.44 SO0833 endA endonuclease I (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.75 Shewana3_3592 excinuclease ABC subunit A (RefSeq) 0.44 Shewana3_3443 endonuclease I (RefSeq) low > 73
Shewanella loihica PV-4 0.74 Shew_0533 excinuclease ABC, A subunit (RefSeq) 0.47 Shew_3223 deoxyribonuclease I (RefSeq) low > 60

Not shown: 60 genomes with orthologs for AO356_14785 only; 0 genomes with orthologs for AO356_00985 only