Conservation of cofitness between AO353_07550 and AO353_09950 in Pseudomonas fluorescens FW300-N2E3

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E3 1.0 AO353_07550 chloramphenical resistance permease RarD 1.0 AO353_09950 aspartate ammonia-lyase 0.28 11
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_2480 Protein rarD 0.98 Pf1N1B4_2025 Aspartate ammonia-lyase (EC 4.3.1.1) — —
Pseudomonas fluorescens GW456-L13 0.96 PfGW456L13_1142 Protein rarD 0.97 PfGW456L13_742 Aspartate ammonia-lyase (EC 4.3.1.1) low > 87
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_4754 Protein rarD 0.98 Pf6N2E2_4085 Aspartate ammonia-lyase (EC 4.3.1.1) — —
Pseudomonas sp. RS175 0.93 PFR28_04108 Protein RarD 0.98 PFR28_04498 Aspartate ammonia-lyase low > 88
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_14110 Putative D-serine transporter (from data) 0.98 AO356_11090 aspartate ammonia-lyase 0.24 79
Pseudomonas fluorescens SBW25 0.91 PFLU_RS27675 EamA family transporter RarD 0.97 PFLU_RS29815 aspartate ammonia-lyase low > 109
Pseudomonas simiae WCS417 0.91 PS417_26030 chloramphenical resistance permease RarD 0.98 PS417_28130 aspartate ammonia-lyase — —
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS27675 EamA family transporter RarD 0.97 PFLU_RS29815 aspartate ammonia-lyase low > 109
Pseudomonas putida KT2440 0.90 PP_0358 conserved membrane protein of unknown function 0.94 PP_5338 aspartate ammonia-lyase low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.78 Psyr_4698 RarD protein 0.92 Psyr_5051 Aspartate ammonia-lyase low > 86
Pseudomonas syringae pv. syringae B728a 0.78 Psyr_4698 RarD protein 0.92 Psyr_5051 Aspartate ammonia-lyase low > 86
Pseudomonas sp. S08-1 0.72 OH686_10385 Uncharacterized inner membrane protein RarD 0.89 OH686_13315 Aspartate ammonia-lyase — —
Pseudomonas stutzeri RCH2 0.68 Psest_0356 rarD protein 0.85 Psest_4074 Aspartate ammonia-lyase — —
Escherichia coli ECRC100 0.48 OKFHMN_14375 rarD EamA family transporter RarD 0.52 OKFHMN_12430 aspA aspartate ammonia-lyase low > 80
Escherichia coli ECRC99 0.48 KEDOAH_13775 rarD EamA family transporter RarD 0.52 KEDOAH_15735 aspA aspartate ammonia-lyase — —
Escherichia coli ECOR27 0.48 NOLOHH_06505 rarD EamA family transporter RarD 0.52 NOLOHH_04695 aspA aspartate ammonia-lyase low > 75
Escherichia coli ECRC102 0.48 NIAGMN_12130 rarD EamA family transporter RarD 0.52 NIAGMN_10275 aspA aspartate ammonia-lyase — —
Escherichia coli ECRC62 0.48 BNILDI_05025 rarD EamA family transporter RarD 0.52 BNILDI_06795 aspA aspartate ammonia-lyase low > 75
Escherichia coli ECRC98 0.48 JDDGAC_18000 rarD EamA family transporter RarD 0.52 JDDGAC_16065 aspA aspartate ammonia-lyase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_04232 Protein RarD 0.52 OHPLBJKB_03904 Aspartate ammonia-lyase low > 73
Escherichia coli BW25113 0.48 b3819 rarD predicted chloramphenical resistance permease (NCBI) 0.52 b4139 aspA aspartate ammonia-lyase (aspartase) (VIMSS) low > 76
Escherichia fergusonii Becca 0.48 EFB2_04818 Protein RarD 0.52 EFB2_04396 Aspartate ammonia-lyase low > 86
Escherichia coli ECRC101 0.48 MCAODC_04880 rarD EamA family transporter RarD 0.52 MCAODC_02940 aspA aspartate ammonia-lyase low > 87
Escherichia coli BL21 0.48 ECD_03698 putative chloramphenical resistance permease 0.52 ECD_04009 aspartate ammonia-lyase low > 61
Escherichia coli ECOR38 0.48 HEPCGN_13075 rarD EamA family transporter RarD 0.52 HEPCGN_10655 aspA aspartate ammonia-lyase low > 87
Escherichia coli Nissle 1917 0.47 ECOLIN_RS21920 EamA family transporter RarD 0.52 ECOLIN_RS24045 aspartate ammonia-lyase low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF245 Protein rarD 0.51 GFF2013 Aspartate ammonia-lyase (EC 4.3.1.1) low > 78
Enterobacter sp. TBS_079 0.47 MPMX20_04461 Protein RarD 0.51 MPMX20_00419 Aspartate ammonia-lyase low > 85
Serratia liquefaciens MT49 0.46 IAI46_00755 EamA family transporter RarD 0.52 IAI46_01480 aspartate ammonia-lyase low > 86
Enterobacter asburiae PDN3 0.46 EX28DRAFT_4484 rarD protein 0.51 EX28DRAFT_3336 aspartate ammonia-lyase low > 76
Pectobacterium carotovorum WPP14 0.45 HER17_RS01380 EamA family transporter RarD 0.51 HER17_RS18835 aspartate ammonia-lyase low > 75
Dickeya dadantii 3937 0.45 DDA3937_RS19865 EamA family transporter RarD 0.50 DDA3937_RS02720 aspartate ammonia-lyase low > 74
Pantoea sp. MT58 0.45 IAI47_18375 EamA family transporter RarD 0.52 IAI47_17320 aspartate ammonia-lyase low > 76
Shewanella amazonensis SB2B 0.45 Sama_0332 rarD protein (RefSeq) 0.59 Sama_0789 aspartate ammonia-lyase (RefSeq) low > 62
Klebsiella michiganensis M5al 0.44 BWI76_RS01230 chloramphenicol resistance permease RarD 0.51 BWI76_RS02330 aspartate ammonia-lyase low > 92
Rahnella sp. WP5 0.44 EX31_RS15195 EamA family transporter RarD 0.53 EX31_RS08965 aspartate ammonia-lyase low > 89
Vibrio cholerae E7946 ATCC 55056 0.44 CSW01_01040 protein RarD 0.53 CSW01_13620 aspartate ammonia-lyase low > 62
Dickeya dianthicola ME23 0.43 DZA65_RS21060 EamA family transporter RarD 0.51 DZA65_RS02850 aspartate ammonia-lyase low > 75
Dickeya dianthicola 67-19 0.43 HGI48_RS20020 EamA family transporter RarD 0.51 HGI48_RS02695 aspartate ammonia-lyase low > 71
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS20410 transporter 0.59 RR42_RS26135 aspartate ammonia-lyase low > 128
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS26035 EamA family transporter RarD 0.56 QEN71_RS33820 aspartate ammonia-lyase low > 153
Desulfovibrio vulgaris Hildenborough JW710 0.39 DVU2425 rarD rarD protein (TIGR) 0.54 DVU1871 aspA aspartate ammonia-lyase (TIGR) low > 55
Agrobacterium fabrum C58 0.38 Atu1068 hypothetical protein 0.55 Atu3793 aspartate ammonia-lyase low > 89
Desulfovibrio vulgaris Miyazaki F 0.35 DvMF_2967 RarD protein, DMT superfamily transporter (RefSeq) 0.53 DvMF_0565 aspA aspartate ammonia-lyase (RefSeq) low > 51
Azospirillum sp. SherDot2 0.34 MPMX19_00476 Protein RarD 0.57 MPMX19_03594 Aspartate ammonia-lyase low > 112
Pontibacter actiniarum KMM 6156, DSM 19842 0.20 CA264_15360 permease 0.57 CA264_18450 aspartate ammonia-lyase low > 74

Not shown: 28 genomes with orthologs for AO353_07550 only; 11 genomes with orthologs for AO353_09950 only