Conservation of cofitness between AMB_RS06360 and AMB_RS18255 in Magnetospirillum magneticum AMB-1

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Magnetospirillum magneticum AMB-1 1.0 AMB_RS06360 EamA family transporter RarD 1.0 AMB_RS18255 bifunctional metallophosphatase/5'-nucleotidase 0.77 3
Serratia liquefaciens MT49 0.44 IAI46_00755 EamA family transporter RarD 0.09 IAI46_05290 bifunctional UDP-sugar hydrolase/5'-nucleotidase low > 86
Enterobacter asburiae PDN3 0.44 EX28DRAFT_4484 rarD protein 0.11 EX28DRAFT_2478 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases low > 76
Escherichia fergusonii Becca 0.44 EFB2_04818 Protein RarD 0.16 EFB2_04673 Trifunctional nucleotide phosphoesterase protein YfkN low > 86
Escherichia coli BL21 0.44 ECD_03698 putative chloramphenical resistance permease 0.10 ECD_00431 bifunctional UDP-sugar hydrolase/5'-nucleotidase low > 61
Escherichia coli ECRC62 0.44 BNILDI_05025 rarD EamA family transporter RarD 0.10 BNILDI_22460 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase low > 75
Escherichia coli ECOR27 0.44 NOLOHH_06505 rarD EamA family transporter RarD 0.10 NOLOHH_01040 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_04232 Protein RarD 0.10 OHPLBJKB_03194 Protein UshA low > 73
Escherichia coli BW25113 0.44 b3819 rarD predicted chloramphenical resistance permease (NCBI) 0.10 b0480 ushA UDP-sugar hydrolase (NCBI) low > 76
Escherichia coli ECOR38 0.44 HEPCGN_13075 rarD EamA family transporter RarD 0.15 HEPCGN_12315 multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase low > 87
Escherichia coli ECRC99 0.44 KEDOAH_13775 rarD EamA family transporter RarD 0.10 KEDOAH_19860 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase — —
Pectobacterium carotovorum WPP14 0.44 HER17_RS01380 EamA family transporter RarD 0.09 HER17_RS15670 bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA low > 75
Escherichia coli ECRC100 0.44 OKFHMN_14375 rarD EamA family transporter RarD 0.10 OKFHMN_08110 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase low > 80
Escherichia coli ECRC98 0.44 JDDGAC_18000 rarD EamA family transporter RarD 0.10 JDDGAC_11755 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase low > 86
Escherichia coli ECRC101 0.44 MCAODC_04880 rarD EamA family transporter RarD 0.10 MCAODC_27330 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase 0.49 44
Escherichia coli ECRC102 0.44 NIAGMN_12130 rarD EamA family transporter RarD 0.10 NIAGMN_06160 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase — —
Erwinia tracheiphila SCR3 0.44 LU632_RS24110 rarD EamA family transporter RarD 0.09 LU632_RS18065 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA low > 74
Escherichia coli Nissle 1917 0.44 ECOLIN_RS21920 EamA family transporter RarD 0.16 ECOLIN_RS22755 bifunctional UDP-sugar hydrolase/5'-nucleotidase low > 55
Enterobacter sp. TBS_079 0.44 MPMX20_04461 Protein RarD 0.11 MPMX20_01081 Protein UshA low > 85
Dickeya dadantii 3937 0.43 DDA3937_RS19865 EamA family transporter RarD 0.09 DDA3937_RS05815 bifunctional UDP-sugar hydrolase/5'-nucleotidase low > 74
Dickeya dianthicola 67-19 0.43 HGI48_RS20020 EamA family transporter RarD 0.09 HGI48_RS05865 bifunctional UDP-sugar hydrolase/5'-nucleotidase low > 71
Rahnella sp. WP5 0.43 EX31_RS15195 EamA family transporter RarD 0.08 EX31_RS08725 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF245 Protein rarD 0.16 GFF2328 '5'-nucleotidase (EC 3.1.3.5)' transl_table=11 low > 78
Shewanella sp. ANA-3 0.42 Shewana3_3765 transporter DMT superfamily protein (RefSeq) 0.10 Shewana3_2454 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor (RefSeq) low > 73
Dickeya dianthicola ME23 0.42 DZA65_RS21060 EamA family transporter RarD 0.09 DZA65_RS06190 bifunctional UDP-sugar hydrolase/5'-nucleotidase low > 75
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_07550 chloramphenical resistance permease RarD 0.11 AO353_04885 multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase low > 101
Shewanella loihica PV-4 0.42 Shew_3476 transporter DMT superfamily protein (RefSeq) 0.11 Shew_2135 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor (RefSeq) low > 60
Shewanella oneidensis MR-1 0.42 SO4243 rarD rarD protein (NCBI ptt file) 0.10 SO2001 ushA 5'-nucleotidase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.41 Sama_0332 rarD protein (RefSeq) 0.10 Sama_2021 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor (RefSeq) low > 62
Pantoea sp. MT58 0.41 IAI47_18375 EamA family transporter RarD 0.11 IAI47_14425 bifunctional UDP-sugar hydrolase/5'-nucleotidase low > 76
Klebsiella michiganensis M5al 0.41 BWI76_RS01230 chloramphenicol resistance permease RarD 0.10 BWI76_RS06865 bifunctional UDP-sugar hydrolase/5'-nucleotidase low > 92
Pseudomonas putida KT2440 0.40 PP_0358 conserved membrane protein of unknown function 0.13 PP_1414 5'-nucleotidase - 2',3'-cyclic phosphodiesterase low > 96
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_01040 protein RarD 0.09 CSW01_10820 bifunctional UDP-sugar hydrolase/5'-nucleotidase low > 62
Azospirillum brasilense Sp245 0.36 AZOBR_RS04315 transporter 0.24 AZOBR_RS16765 5'-nucleotidase low > 97
Sphingomonas koreensis DSMZ 15582 0.35 Ga0059261_3478 rarD protein 0.12 Ga0059261_1283 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases low > 68
Phaeobacter inhibens DSM 17395 0.35 PGA1_c33100 protein RarD 0.18 PGA1_c12170 putative 5'-nucleotidase low > 62
Sinorhizobium meliloti 1021 0.34 SMc02545 hypothetical protein 0.20 SMc04018 5'-nucleotidase low > 103
Rhizobium sp. OAE497 0.34 ABIE40_RS06215 EamA family transporter RarD 0.19 ABIE40_RS16220 5'-nucleotidase C-terminal domain-containing protein low > 107
Rhodospirillum rubrum S1H 0.33 Rru_A0706 RarD protein (NCBI) 0.34 Rru_A2483 5'-Nucleotidase (NCBI) low > 58
Acidovorax sp. GW101-3H11 0.33 Ac3H11_4000 RarD protein, DMT superfamily transporter 0.07 Ac3H11_2924 5'-nucleotidase (EC 3.1.3.5) low > 79
Azospirillum sp. SherDot2 0.32 MPMX19_00476 Protein RarD 0.42 MPMX19_05245 Trifunctional nucleotide phosphoesterase protein YfkN low > 112
Agrobacterium fabrum C58 0.32 Atu1068 hypothetical protein 0.18 Atu3770 5'-nucleotidase low > 89
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS12695 EamA family transporter RarD 0.09 A4249_RS11515 bifunctional metallophosphatase/5'-nucleotidase low > 48

Not shown: 36 genomes with orthologs for AMB_RS06360 only; 6 genomes with orthologs for AMB_RS18255 only