Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Ralstonia sp. UNC404CL21Col | 1.0 | ABZR87_RS08765 | | TolC family outer membrane protein | 1.0 | ABZR87_RS10870 | | peptidoglycan DD-metalloendopeptidase family protein | 0.44 | 18 |
Ralstonia solanacearum PSI07 | 0.83 | RPSI07_RS20545 | | channel protein TolC | 0.81 | RPSI07_RS18145 | | LysM peptidoglycan-binding domain-containing protein | low | > 81 |
Ralstonia solanacearum UW163 | 0.82 | UW163_RS00850 | | channel protein TolC | 0.84 | UW163_RS12695 | | hypothetical protein | — | — |
Ralstonia solanacearum GMI1000 | 0.82 | RS_RS03495 | | channel protein TolC | 0.81 | RS_RS06040 | | LysM peptidoglycan-binding domain-containing protein | low | > 80 |
Ralstonia solanacearum IBSBF1503 | 0.82 | RALBFv3_RS12715 | | channel protein TolC | 0.84 | RALBFv3_RS15230 | | hypothetical protein | low | > 76 |
Cupriavidus basilensis FW507-4G11 | 0.53 | RR42_RS15670 | | channel protein TolC | 0.60 | RR42_RS13190 | | outer membrane metallopeptidase lipoprotein nlpD | low | > 128 |
Paraburkholderia bryophila 376MFSha3.1 | 0.39 | H281DRAFT_00100 | | outer membrane protein | 0.45 | H281DRAFT_00843 | | lipoprotein NlpD | low | > 103 |
Dechlorosoma suillum PS | 0.38 | Dsui_0405 | | type I secretion outer membrane protein, TolC family | 0.38 | Dsui_1970 | | metalloendopeptidase-like membrane protein | low | > 51 |
Variovorax sp. OAS795 | 0.32 | ABID97_RS21375 | | TolC family outer membrane protein | 0.42 | ABID97_RS10725 | | peptidoglycan DD-metalloendopeptidase family protein | low | > 91 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.32 | GFF5765 | | Type I secretion outer membrane protein, TolC precursor | 0.41 | GFF3881 | | Lipoprotein NlpD | low | > 90 |
Variovorax sp. SCN45 | 0.30 | GFF6530 | | Type I secretion outer membrane protein, TolC family | 0.42 | GFF2843 | | Murein hydrolase activator NlpD | low | > 127 |
Acidovorax sp. GW101-3H11 | 0.30 | Ac3H11_2219 | | Type I secretion outer membrane protein, TolC precursor | 0.39 | Ac3H11_1786 | | Lipoprotein NlpD | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.25 | AO356_08815 | | channel protein TolC | 0.33 | AO356_05890 | | peptigoglycan-binding protein LysM | — | — |
Pseudomonas syringae pv. syringae B728a | 0.24 | Psyr_0543 | | Type I secretion outer membrane protein, TolC | 0.33 | Psyr_1373 | | Peptidoglycan-binding LysM:Peptidase M23B | low | > 86 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.24 | Psyr_0543 | | Type I secretion outer membrane protein, TolC | 0.33 | Psyr_1373 | | Peptidoglycan-binding LysM:Peptidase M23B | — | — |
Pseudomonas sp. RS175 | 0.24 | PFR28_05090 | | Outer membrane protein TolC | 0.33 | PFR28_00426 | | hypothetical protein | — | — |
Pseudomonas fluorescens FW300-N2E3 | 0.24 | AO353_13005 | | channel protein TolC | 0.34 | AO353_16610 | | peptigoglycan-binding protein LysM | — | — |
Pseudomonas simiae WCS417 | 0.24 | PS417_02350 | | channel protein TolC | 0.34 | PS417_06360 | | peptigoglycan-binding protein LysM | — | — |
Pseudomonas fluorescens SBW25 | 0.24 | PFLU_RS02425 | | TolC family outer membrane protein | 0.35 | PFLU_RS06425 | | peptidoglycan DD-metalloendopeptidase family protein | — | — |
Pseudomonas fluorescens SBW25-INTG | 0.24 | PFLU_RS02425 | | TolC family outer membrane protein | 0.35 | PFLU_RS06425 | | peptidoglycan DD-metalloendopeptidase family protein | — | — |
Pseudomonas putida KT2440 | 0.23 | PP_4923 | | Outer membrane efflux protein | 0.32 | PP_1622 | | metallopeptidase, M23B subfamily | — | — |
Kangiella aquimarina DSM 16071 | 0.23 | B158DRAFT_0973 | | type I secretion outer membrane protein, TolC family | 0.28 | B158DRAFT_2299 | | Membrane proteins related to metalloendopeptidases | low | > 40 |
Lysobacter sp. OAE881 | 0.23 | ABIE51_RS17615 | | TolC family outer membrane protein | 0.28 | ABIE51_RS06500 | | peptidoglycan DD-metalloendopeptidase family protein | low | > 62 |
Pseudomonas sp. S08-1 | 0.23 | OH686_15890 | | Outer membrane channel TolC (OpmH) | 0.33 | OH686_18180 | | Murein hydrolase activator NlpD | low | > 80 |
Pseudomonas stutzeri RCH2 | 0.23 | Psest_0476 | | type I secretion outer membrane protein, TolC family | 0.31 | Psest_2807 | | Membrane proteins related to metalloendopeptidases | — | — |
Rhodanobacter denitrificans MT42 | 0.22 | LRK55_RS06430 | | TolC family outer membrane protein | 0.26 | LRK55_RS16390 | | peptidoglycan DD-metalloendopeptidase family protein | — | — |
Xanthomonas campestris pv. campestris strain 8004 | 0.22 | Xcc-8004.1042.1 | | Type I secretion outer membrane protein, TolC precursor | 0.31 | Xcc-8004.3127.1 | | Lipoprotein NlpD | — | — |
Rhodanobacter denitrificans FW104-10B01 | 0.22 | LRK54_RS06685 | | TolC family outer membrane protein | 0.26 | LRK54_RS16665 | | peptidoglycan DD-metalloendopeptidase family protein | low | > 59 |
Alteromonas macleodii MIT1002 | 0.22 | MIT1002_00670 | | Outer membrane protein TolC precursor | 0.32 | MIT1002_00626 | | Murein hydrolase activator NlpD precursor | low | > 70 |
Escherichia coli BW25113 | 0.21 | b3035 | tolC | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | 0.29 | b2865 | b2865 | putative lipoprotein (VIMSS) | low | > 76 |
Escherichia coli ECOR38 | 0.21 | HEPCGN_17680 | tolC | outer membrane channel protein TolC | 0.29 | HEPCGN_19010 | actS | amidase activator ActS | low | > 87 |
Escherichia coli BL21 | 0.21 | ECD_02907 | | transport channel | 0.29 | ECD_02698 | | LysM domain-containing M23 family putative peptidase; septation lipoprotein | low | > 61 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.21 | OHPLBJKB_00668 | | Outer membrane protein TolC | 0.29 | OHPLBJKB_00850 | | Murein hydrolase activator NlpD | low | > 73 |
Escherichia coli ECRC99 | 0.21 | KEDOAH_09340 | tolC | outer membrane channel protein TolC | 0.29 | KEDOAH_08415 | actS | amidase activator ActS | — | — |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.20 | GFF3149 | | Type I secretion outer membrane protein, TolC precursor | 0.31 | GFF2984 | | Uncharacterized lipoprotein YgeR precursor | low | > 78 |
Serratia liquefaciens MT49 | 0.18 | IAI46_21945 | | outer membrane channel protein TolC | 0.29 | IAI46_01415 | | peptidoglycan DD-metalloendopeptidase family protein | low | > 86 |
Acinetobacter radioresistens SK82 | 0.16 | MPMX26_00182 | | Outer membrane protein TolC | 0.23 | MPMX26_01055 | | Murein hydrolase activator NlpD | low | > 36 |
Paraburkholderia graminis OAS925 | 0.07 | ABIE53_004979 | | outer membrane protein | 0.47 | ABIE53_002056 | | lipoprotein NlpD | low | > 113 |
Not shown: 45 genomes with orthologs for ABZR87_RS08765 only; 4 genomes with orthologs for ABZR87_RS10870 only