Conservation of cofitness between ABZR87_RS08765 and ABZR87_RS10870 in Ralstonia sp. UNC404CL21Col

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS08765 TolC family outer membrane protein 1.0 ABZR87_RS10870 peptidoglycan DD-metalloendopeptidase family protein 0.44 18
Ralstonia solanacearum PSI07 0.83 RPSI07_RS20545 channel protein TolC 0.81 RPSI07_RS18145 LysM peptidoglycan-binding domain-containing protein low > 81
Ralstonia solanacearum UW163 0.82 UW163_RS00850 channel protein TolC 0.84 UW163_RS12695 hypothetical protein
Ralstonia solanacearum GMI1000 0.82 RS_RS03495 channel protein TolC 0.81 RS_RS06040 LysM peptidoglycan-binding domain-containing protein low > 80
Ralstonia solanacearum IBSBF1503 0.82 RALBFv3_RS12715 channel protein TolC 0.84 RALBFv3_RS15230 hypothetical protein low > 76
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS15670 channel protein TolC 0.60 RR42_RS13190 outer membrane metallopeptidase lipoprotein nlpD low > 128
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_00100 outer membrane protein 0.45 H281DRAFT_00843 lipoprotein NlpD low > 103
Dechlorosoma suillum PS 0.38 Dsui_0405 type I secretion outer membrane protein, TolC family 0.38 Dsui_1970 metalloendopeptidase-like membrane protein low > 51
Variovorax sp. OAS795 0.32 ABID97_RS21375 TolC family outer membrane protein 0.42 ABID97_RS10725 peptidoglycan DD-metalloendopeptidase family protein low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF5765 Type I secretion outer membrane protein, TolC precursor 0.41 GFF3881 Lipoprotein NlpD low > 90
Variovorax sp. SCN45 0.30 GFF6530 Type I secretion outer membrane protein, TolC family 0.42 GFF2843 Murein hydrolase activator NlpD low > 127
Acidovorax sp. GW101-3H11 0.30 Ac3H11_2219 Type I secretion outer membrane protein, TolC precursor 0.39 Ac3H11_1786 Lipoprotein NlpD
Pseudomonas fluorescens FW300-N2C3 0.25 AO356_08815 channel protein TolC 0.33 AO356_05890 peptigoglycan-binding protein LysM
Pseudomonas syringae pv. syringae B728a 0.24 Psyr_0543 Type I secretion outer membrane protein, TolC 0.33 Psyr_1373 Peptidoglycan-binding LysM:Peptidase M23B low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.24 Psyr_0543 Type I secretion outer membrane protein, TolC 0.33 Psyr_1373 Peptidoglycan-binding LysM:Peptidase M23B
Pseudomonas sp. RS175 0.24 PFR28_05090 Outer membrane protein TolC 0.33 PFR28_00426 hypothetical protein
Pseudomonas fluorescens FW300-N2E3 0.24 AO353_13005 channel protein TolC 0.34 AO353_16610 peptigoglycan-binding protein LysM
Pseudomonas simiae WCS417 0.24 PS417_02350 channel protein TolC 0.34 PS417_06360 peptigoglycan-binding protein LysM
Pseudomonas fluorescens SBW25 0.24 PFLU_RS02425 TolC family outer membrane protein 0.35 PFLU_RS06425 peptidoglycan DD-metalloendopeptidase family protein
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS02425 TolC family outer membrane protein 0.35 PFLU_RS06425 peptidoglycan DD-metalloendopeptidase family protein
Pseudomonas putida KT2440 0.23 PP_4923 Outer membrane efflux protein 0.32 PP_1622 metallopeptidase, M23B subfamily
Kangiella aquimarina DSM 16071 0.23 B158DRAFT_0973 type I secretion outer membrane protein, TolC family 0.28 B158DRAFT_2299 Membrane proteins related to metalloendopeptidases low > 40
Lysobacter sp. OAE881 0.23 ABIE51_RS17615 TolC family outer membrane protein 0.28 ABIE51_RS06500 peptidoglycan DD-metalloendopeptidase family protein low > 62
Pseudomonas sp. S08-1 0.23 OH686_15890 Outer membrane channel TolC (OpmH) 0.33 OH686_18180 Murein hydrolase activator NlpD low > 80
Pseudomonas stutzeri RCH2 0.23 Psest_0476 type I secretion outer membrane protein, TolC family 0.31 Psest_2807 Membrane proteins related to metalloendopeptidases
Rhodanobacter denitrificans MT42 0.22 LRK55_RS06430 TolC family outer membrane protein 0.26 LRK55_RS16390 peptidoglycan DD-metalloendopeptidase family protein
Xanthomonas campestris pv. campestris strain 8004 0.22 Xcc-8004.1042.1 Type I secretion outer membrane protein, TolC precursor 0.31 Xcc-8004.3127.1 Lipoprotein NlpD
Rhodanobacter denitrificans FW104-10B01 0.22 LRK54_RS06685 TolC family outer membrane protein 0.26 LRK54_RS16665 peptidoglycan DD-metalloendopeptidase family protein low > 59
Alteromonas macleodii MIT1002 0.22 MIT1002_00670 Outer membrane protein TolC precursor 0.32 MIT1002_00626 Murein hydrolase activator NlpD precursor low > 70
Escherichia coli BW25113 0.21 b3035 tolC outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) 0.29 b2865 b2865 putative lipoprotein (VIMSS) low > 76
Escherichia coli ECOR38 0.21 HEPCGN_17680 tolC outer membrane channel protein TolC 0.29 HEPCGN_19010 actS amidase activator ActS low > 87
Escherichia coli BL21 0.21 ECD_02907 transport channel 0.29 ECD_02698 LysM domain-containing M23 family putative peptidase; septation lipoprotein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_00668 Outer membrane protein TolC 0.29 OHPLBJKB_00850 Murein hydrolase activator NlpD low > 73
Escherichia coli ECRC99 0.21 KEDOAH_09340 tolC outer membrane channel protein TolC 0.29 KEDOAH_08415 actS amidase activator ActS
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.20 GFF3149 Type I secretion outer membrane protein, TolC precursor 0.31 GFF2984 Uncharacterized lipoprotein YgeR precursor low > 78
Serratia liquefaciens MT49 0.18 IAI46_21945 outer membrane channel protein TolC 0.29 IAI46_01415 peptidoglycan DD-metalloendopeptidase family protein low > 86
Acinetobacter radioresistens SK82 0.16 MPMX26_00182 Outer membrane protein TolC 0.23 MPMX26_01055 Murein hydrolase activator NlpD low > 36
Paraburkholderia graminis OAS925 0.07 ABIE53_004979 outer membrane protein 0.47 ABIE53_002056 lipoprotein NlpD low > 113

Not shown: 45 genomes with orthologs for ABZR87_RS08765 only; 4 genomes with orthologs for ABZR87_RS10870 only