Conservation of cofitness between Shewana3_2281 and Shewana3_2541 in Shewanella sp. ANA-3

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella sp. ANA-3 1.0 Shewana3_2281 BadM/Rrf2 family transcriptional regulator (RefSeq) 1.0 Shewana3_2541 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen (RefSeq) 0.67 12
Shewanella loihica PV-4 0.94 Shew_2318 BadM/Rrf2 family transcriptional regulator (RefSeq) 0.94 Shew_1516 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (RefSeq) — —
Shewanella amazonensis SB2B 0.92 Sama_1292 Rrf2 family protein (RefSeq) 0.93 Sama_2094 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen (RefSeq) low > 62
Pectobacterium carotovorum WPP14 0.70 HER17_RS06010 Fe-S cluster assembly transcriptional regulator IscR 0.78 HER17_RS16005 peroxiredoxin C 0.66 26
Vibrio cholerae E7946 ATCC 55056 0.70 CSW01_03880 HTH-type transcriptional regulator IscR 0.81 CSW01_03815 peroxidase low > 62
Alteromonas macleodii MIT1002 0.68 MIT1002_02802 HTH-type transcriptional regulator IscR 0.86 MIT1002_01241 putative peroxiredoxin low > 70
Erwinia tracheiphila SCR3 0.68 LU632_RS17875 iscR Fe-S cluster assembly transcriptional regulator IscR 0.77 LU632_RS18475 peroxiredoxin C low > 74
Rahnella sp. WP5 0.68 EX31_RS20550 Fe-S cluster assembly transcriptional regulator IscR 0.81 EX31_RS22080 peroxiredoxin C low > 89
Serratia liquefaciens MT49 0.68 IAI46_19360 Fe-S cluster assembly transcriptional regulator IscR 0.77 IAI46_04825 peroxiredoxin C low > 86
Dickeya dadantii 3937 0.68 DDA3937_RS15550 Fe-S cluster assembly transcriptional regulator IscR 0.80 DDA3937_RS05455 peroxiredoxin C — —
Dickeya dianthicola ME23 0.68 DZA65_RS16725 Fe-S cluster assembly transcriptional regulator IscR 0.80 DZA65_RS05840 peroxiredoxin C low > 75
Dickeya dianthicola 67-19 0.68 HGI48_RS15650 Fe-S cluster assembly transcriptional regulator IscR 0.80 HGI48_RS05515 peroxiredoxin C — —
Pseudomonas putida KT2440 0.66 PP_0841 DNA-binding transcriptional dual regulator 2Fe-2S cluster IscR 0.79 PP_1084 putative peroxiredoxin low > 96
Pseudomonas simiae WCS417 0.65 PS417_23205 transcriptional regulator 0.76 PS417_05620 alkyl hydroperoxide reductase low > 88
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS24860 Fe-S cluster assembly transcriptional regulator IscR 0.76 PFLU_RS05705 peroxiredoxin low > 109
Pseudomonas fluorescens SBW25 0.65 PFLU_RS24860 Fe-S cluster assembly transcriptional regulator IscR 0.76 PFLU_RS05705 peroxiredoxin low > 109
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_15830 transcriptional regulator 0.77 AO353_04125 alkyl hydroperoxide reductase low > 101
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_06650 transcriptional regulator 0.76 AO356_18305 alkyl hydroperoxide reductase low > 104
Pseudomonas sp. RS175 0.64 PFR28_00285 HTH-type transcriptional regulator IscR 0.76 PFR28_03357 Alkyl hydroperoxide reductase C low > 88
Klebsiella michiganensis M5al 0.59 BWI76_RS21165 Fe-S cluster assembly transcriptional regulator IscR 0.76 BWI76_RS06285 peroxiredoxin low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF2436 Iron-sulfur cluster regulator IscR 0.78 GFF4302 Alkyl hydroperoxide reductase subunit C-like protein low > 78
Enterobacter sp. TBS_079 0.59 MPMX20_03412 HTH-type transcriptional regulator IscR 0.78 MPMX20_00994 Alkyl hydroperoxide reductase C low > 85
Enterobacter asburiae PDN3 0.58 EX28DRAFT_0108 transcriptional regulator, BadM/Rrf2 family 0.78 EX28DRAFT_2568 Peroxiredoxin low > 76
Pseudomonas fluorescens FW300-N1B4 0.58 Pf1N1B4_866 Iron-sulfur cluster regulator IscR 0.77 Pf1N1B4_746 Alkyl hydroperoxide reductase subunit C-like protein — —
Kangiella aquimarina DSM 16071 0.58 B158DRAFT_1458 transcriptional regulator, BadM/Rrf2 family 0.85 B158DRAFT_1235 Peroxiredoxin low > 40
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_4874 Iron-sulfur cluster regulator IscR 0.76 PfGW456L13_1745 Alkyl hydroperoxide reductase subunit C-like protein low > 87
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_3190 Iron-sulfur cluster regulator IscR 0.76 Pf6N2E2_5586 Alkyl hydroperoxide reductase subunit C-like protein low > 103
Dechlorosoma suillum PS 0.50 Dsui_2369 iron-sulfur cluster assembly transcription factor IscR 0.76 Dsui_1253 peroxiredoxin low > 51
Rhodospirillum rubrum S1H 0.46 Rru_A2028 Transcriptional Regulator, BadM/Rrf2 family (NCBI) 0.60 Rru_A2897 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (NCBI) — —
Magnetospirillum magneticum AMB-1 0.45 AMB_RS15265 Rrf2 family transcriptional regulator 0.60 AMB_RS03415 peroxiredoxin — —
Phaeobacter inhibens DSM 17395 0.37 PGA1_c15350 putative transcriptional regulator 0.19 PGA1_c33020 peroxiredoxin — —
Desulfovibrio vulgaris Hildenborough JW710 0.35 DVU0529 rrf2 Rrf2 protein (voordouw) 0.71 DVU2247 ahpC alkyl hydroperoxide reductase C (Dmitry Rodionov) low > 55
Rhizobium sp. OAE497 0.23 ABIE40_RS15020 Rrf2 family transcriptional regulator 0.23 ABIE40_RS15050 peroxiredoxin low > 107
Agrobacterium fabrum C58 0.22 Atu3423 hypothetical protein 0.23 Atu1480 hypothetical protein low > 89
Pedobacter sp. GW460-11-11-14-LB5 0.18 CA265_RS04090 transcriptional regulator 0.40 CA265_RS21370 peroxiredoxin — —

Not shown: 32 genomes with orthologs for Shewana3_2281 only; 5 genomes with orthologs for Shewana3_2541 only