Conservation of cofitness between Shewana3_1206 and Shewana3_2266 in Shewanella sp. ANA-3

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella sp. ANA-3 1.0 Shewana3_1206 MscS mechanosensitive ion channel (RefSeq) 1.0 Shewana3_2266 GntR family transcriptional regulator (RefSeq) 0.66 6
Shewanella oneidensis MR-1 0.97 SO3340 hypothetical Small-conductance mechanosensitive channel (NCBI ptt file) 0.91 SO2282 transcriptional regulator, GntR family (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.85 Sama_2465 putative small-conductance mechanosensitive channel (RefSeq) 0.42 Sama_2016 GntR family transcriptional regulator (RefSeq)
Klebsiella michiganensis M5al 0.46 BWI76_RS23970 mechanosensitive ion channel protein MscS 0.12 BWI76_RS07560 aminotransferase regulator domain-containing protein low > 92
Enterobacter sp. TBS_079 0.42 MPMX20_03776 Small-conductance mechanosensitive channel 0.16 MPMX20_01157 hypothetical protein low > 85
Pseudomonas simiae WCS417 0.39 PS417_22505 mechanosensitive ion channel protein MscS 0.22 PS417_21030 GntR family transcriptional regulator low > 88
Pseudomonas fluorescens SBW25 0.37 PFLU_RS24145 mechanosensitive ion channel 0.22 PFLU_RS22640 PLP-dependent aminotransferase family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS24145 mechanosensitive ion channel 0.22 PFLU_RS22640 PLP-dependent aminotransferase family protein low > 109
Echinicola vietnamensis KMM 6221, DSM 17526 0.37 Echvi_1017 Small-conductance mechanosensitive channel 0.10 Echvi_1967 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs low > 79
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_649 Small-conductance mechanosensitive channel 0.17 Pf1N1B4_818 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) low > 87
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_17965 mechanosensitive ion channel protein MscS 0.17 AO356_16875 GntR family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_5523 Small-conductance mechanosensitive channel 0.17 Pf6N2E2_5300 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) low > 103
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_03635 mechanosensitive ion channel protein MscS 0.17 AO353_29325 GntR family transcriptional regulator low > 101
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS37450 mechanosensitive ion channel protein MscS 0.16 RR42_RS26005 GntR family transcriptional regulator low > 128
Phaeobacter inhibens DSM 17395 0.34 PGA1_c07080 small-conductance mechanosensitive channel 0.19 PGA1_c01810 putative transcriptional regulator, GntR family low > 62
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_1841 Small-conductance mechanosensitive channel 0.17 PfGW456L13_3363 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) low > 87
Pseudomonas putida KT2440 0.31 PP_1353 conserved membrane protein of unknown function 0.16 PP_0486 Transcriptional regulator, GntR family low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_4086 MscS Mechanosensitive ion channel 0.11 Psyr_5056 transcriptional regulator, GntR family low > 86
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_4086 MscS Mechanosensitive ion channel 0.11 Psyr_5056 transcriptional regulator, GntR family low > 86
Pseudomonas sp. S08-1 0.28 OH686_08205 Small-conductance mechanosensitive channel 0.23 OH686_10570 Transcriptional regulator, GntR family domain / Aspartate aminotransferase low > 80
Rhizobium sp. OAE497 0.27 ABIE40_RS06130 mechanosensitive ion channel domain-containing protein 0.18 ABIE40_RS23360 PLP-dependent aminotransferase family protein low > 107
Ralstonia solanacearum GMI1000 0.27 RS_RS13330 mechanosensitive ion channel family protein 0.16 RS_RS09375 PLP-dependent aminotransferase family protein low > 80
Ralstonia solanacearum PSI07 0.26 RPSI07_RS11830 mechanosensitive ion channel family protein 0.15 RPSI07_RS13745 PLP-dependent aminotransferase family protein low > 81
Ralstonia sp. UNC404CL21Col 0.26 ABZR87_RS01115 mechanosensitive ion channel family protein 0.14 ABZR87_RS17005 PLP-dependent aminotransferase family protein low > 80
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS06305 small mechanosensitive ion channel protein MscS 0.17 BPHYT_RS05430 GntR family transcriptional regulator low > 109
Paraburkholderia sabiae LMG 24235 0.24 QEN71_RS26425 mechanosensitive ion channel family protein 0.20 QEN71_RS03175 PLP-dependent aminotransferase family protein low > 153
Agrobacterium fabrum C58 0.22 Atu1050 hypothetical protein 0.17 Atu1848 transcriptional regulator, GntR family low > 89
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_04714 small conductance mechanosensitive channel 0.15 H281DRAFT_06094 transcriptional regulator, GntR family low > 103

Not shown: 51 genomes with orthologs for Shewana3_1206 only; 8 genomes with orthologs for Shewana3_2266 only