Conservation of cofitness between Sama_0255 and Sama_3200 in Shewanella amazonensis SB2B

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_0255 acetylornithine deacetylase (RefSeq) 1.0 Sama_3200 ribonuclease activity regulator protein RraA (RefSeq) 0.45 14
Shewanella loihica PV-4 0.76 Shew_0201 acetylornithine deacetylase (RefSeq) 0.87 Shew_3370 ribonuclease activity regulator protein RraA (RefSeq) — —
Escherichia coli BW25113 0.58 b3957 argE acetylornithine deacetylase (NCBI) 0.72 b3929 rraA ribonuclease activity regulator protein RraA (NCBI) low > 76
Enterobacter sp. TBS_079 0.58 MPMX20_04523 Acetylornithine deacetylase 0.74 MPMX20_04540 Regulator of ribonuclease activity A low > 85
Escherichia coli ECOR27 0.58 NOLOHH_05735 argE acetylornithine deacetylase 0.72 NOLOHH_05895 rraA ribonuclease E activity regulator RraA low > 75
Escherichia fergusonii Becca 0.58 EFB2_04657 Acetylornithine deacetylase 0.72 EFB2_04689 Regulator of ribonuclease activity A low > 86
Enterobacter asburiae PDN3 0.58 EX28DRAFT_4419 acetylornithine deacetylase (ArgE) 0.73 EX28DRAFT_4402 regulator of ribonuclease activity A low > 76
Escherichia coli Nissle 1917 0.58 ECOLIN_RS22840 acetylornithine deacetylase 0.72 ECOLIN_RS22625 ribonuclease E activity regulator RraA low > 55
Escherichia coli BL21 0.58 ECD_03842 acetylornithine deacetylase 0.72 ECD_03814 ribonuclease E (RNase E) inhibitor protein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_04093 Acetylornithine deacetylase 0.72 OHPLBJKB_04122 Regulator of ribonuclease activity A low > 73
Escherichia coli ECOR38 0.58 HEPCGN_12235 argE acetylornithine deacetylase 0.72 HEPCGN_12395 rraA ribonuclease E activity regulator RraA low > 87
Escherichia coli ECRC62 0.57 BNILDI_05790 argE acetylornithine deacetylase 0.72 BNILDI_05635 rraA ribonuclease E activity regulator RraA low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF2343 Acetylornithine deacetylase (EC 3.5.1.16) 0.73 GFF2311 Ribonuclease E inhibitor RraA low > 78
Escherichia coli ECRC98 0.57 JDDGAC_17215 argE acetylornithine deacetylase 0.72 JDDGAC_17375 rraA ribonuclease E activity regulator RraA low > 86
Escherichia coli ECRC99 0.57 KEDOAH_14570 argE acetylornithine deacetylase 0.72 KEDOAH_14410 rraA ribonuclease E activity regulator RraA — —
Escherichia coli ECRC102 0.57 NIAGMN_11340 argE acetylornithine deacetylase 0.72 NIAGMN_11505 rraA ribonuclease E activity regulator RraA — —
Escherichia coli ECRC101 0.57 MCAODC_04090 argE acetylornithine deacetylase 0.72 MCAODC_04250 rraA ribonuclease E activity regulator RraA low > 87
Escherichia coli ECRC100 0.57 OKFHMN_13590 argE acetylornithine deacetylase 0.72 OKFHMN_13750 rraA ribonuclease E activity regulator RraA low > 80
Pectobacterium carotovorum WPP14 0.57 HER17_RS20635 acetylornithine deacetylase 0.72 HER17_RS00840 ribonuclease E activity regulator RraA low > 75
Serratia liquefaciens MT49 0.57 IAI46_24520 acetylornithine deacetylase 0.72 IAI46_24585 ribonuclease E activity regulator RraA low > 86
Klebsiella michiganensis M5al 0.57 BWI76_RS00840 acetylornithine deacetylase 0.72 BWI76_RS00740 ribonuclease E activity regulator RraA low > 92
Rahnella sp. WP5 0.56 EX31_RS14195 acetylornithine deacetylase 0.72 EX31_RS14255 ribonuclease E activity regulator RraA low > 89
Dickeya dianthicola ME23 0.56 DZA65_RS00930 acetylornithine deacetylase 0.68 DZA65_RS21515 ribonuclease E activity regulator RraA low > 75
Dickeya dianthicola 67-19 0.56 HGI48_RS00870 acetylornithine deacetylase 0.68 HGI48_RS20470 ribonuclease E activity regulator RraA low > 71
Dickeya dadantii 3937 0.56 DDA3937_RS20355 acetylornithine deacetylase 0.68 DDA3937_RS00905 ribonuclease E activity regulator RraA low > 74
Pantoea sp. MT58 0.55 IAI47_00900 acetylornithine deacetylase 0.63 IAI47_00840 ribonuclease E activity regulator RraA low > 76
Erwinia tracheiphila SCR3 0.55 LU632_RS19620 argE acetylornithine deacetylase 0.72 LU632_RS19685 rraA ribonuclease E activity regulator RraA low > 74
Pseudomonas stutzeri RCH2 0.50 Psest_4001 acetylornithine deacetylase (ArgE) 0.63 Psest_2315 RraA famliy low > 67
Pseudomonas sp. RS175 0.49 PFR28_04309 Acetylornithine deacetylase 0.61 PFR28_01040 Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase low > 88
Pseudomonas putida KT2440 0.49 PP_5186 acetylornithine deacetylase 0.62 PP_2084 Putative regulator of ribonuclease activity low > 96
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_4496 Acetylornithine deacetylase (EC 3.5.1.16) 0.61 Pf6N2E2_2387 Ribonuclease E inhibitor RraA low > 103
Pseudomonas fluorescens FW300-N1B4 0.49 Pf1N1B4_2242 Acetylornithine deacetylase (EC 3.5.1.16) 0.61 Pf1N1B4_3828 Ribonuclease E inhibitor RraA low > 87
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_13080 acetylornithine deacetylase 0.60 AO356_02815 ribonuclease activity regulator protein RraA low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_0253 acetylornithine deacetylase 0.60 Psyr_2092 Protein of unknown function 1935 low > 86
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_0253 acetylornithine deacetylase 0.60 Psyr_2092 Protein of unknown function 1935 low > 86
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_912 Acetylornithine deacetylase (EC 3.5.1.16) 0.58 PfGW456L13_4110 Ribonuclease E inhibitor RraA 0.41 12
Pseudomonas simiae WCS417 0.48 PS417_27200 acetylornithine deacetylase 0.61 PS417_21010 ribonuclease activity regulator protein RraA low > 88
Pseudomonas fluorescens SBW25 0.47 PFLU_RS28860 acetylornithine deacetylase 0.60 PFLU_RS22620 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase low > 109
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS28860 acetylornithine deacetylase 0.60 PFLU_RS22620 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase low > 109
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_08690 acetylornithine deacetylase 0.62 AO353_00850 ribonuclease activity regulator protein RraA low > 101
Vibrio cholerae E7946 ATCC 55056 0.46 CSW01_13385 acetylornithine deacetylase 0.75 CSW01_13500 ribonuclease E activity regulator RraA low > 62
Pseudomonas sp. S08-1 0.46 OH686_11125 acetylornithine deacetylase (ArgE) 0.62 OH686_01650 Ribonuclease E inhibitor RraA low > 80
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS11720 acetylornithine deacetylase 0.39 BPHYT_RS12315 ribonuclease — —
Ralstonia sp. UNC404CL21Col 0.24 ABZR87_RS13245 acetylornithine deacetylase 0.39 ABZR87_RS11580 ribonuclease E activity regulator RraA low > 80
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS22070 acetylornithine deacetylase 0.44 QEN71_RS06240 ribonuclease E activity regulator RraA low > 153

Not shown: 30 genomes with orthologs for Sama_0255 only; 5 genomes with orthologs for Sama_3200 only