Conservation of cofitness between Sama_0857 and Sama_1374 in Shewanella amazonensis SB2B

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_0857 gltB glutamate synthase subunit alpha (RefSeq) 1.0 Sama_1374 homoserine O-succinyltransferase (RefSeq) 0.84 20
Shewanella oneidensis MR-1 0.89 SO1325 gltB glutamate synthase, large subunit (NCBI ptt file) 0.87 SO1676 metA homoserine O-succinyltransferase (NCBI ptt file) 0.85 39
Shewanella sp. ANA-3 0.89 Shewana3_3050 gltB glutamate synthase subunit alpha (RefSeq) 0.88 Shewana3_2772 homoserine O-succinyltransferase (RefSeq) 0.89 17
Shewanella loihica PV-4 0.85 Shew_1032 gltB glutamate synthase subunit alpha (RefSeq) 0.86 Shew_2551 homoserine O-succinyltransferase (RefSeq) 0.93 37
Serratia liquefaciens MT49 0.67 IAI46_22345 glutamate synthase large subunit 0.56 IAI46_23200 homoserine O-succinyltransferase low > 86
Vibrio cholerae E7946 ATCC 55056 0.67 CSW01_12030 glutamate synthase large subunit 0.58 CSW01_08100 homoserine O-succinyltransferase low > 62
Rahnella sp. WP5 0.67 EX31_RS12515 glutamate synthase large subunit 0.57 EX31_RS11735 homoserine O-succinyltransferase 0.97 11
Pectobacterium carotovorum WPP14 0.67 HER17_RS19910 glutamate synthase large subunit 0.55 HER17_RS02285 homoserine O-succinyltransferase low > 75
Erwinia tracheiphila SCR3 0.66 LU632_RS21315 gltB glutamate synthase large subunit 0.57 LU632_RS22410 metA homoserine O-succinyltransferase 0.82 31
Alteromonas macleodii MIT1002 0.66 MIT1002_03139 Glutamate synthase [NADPH] large chain precursor 0.59 MIT1002_01112 Homoserine O-succinyltransferase 0.98 17
Dickeya dianthicola 67-19 0.66 HGI48_RS01560 glutamate synthase large subunit 0.57 HGI48_RS19155 homoserine O-succinyltransferase 0.83 19
Dickeya dadantii 3937 0.66 DDA3937_RS01665 glutamate synthase large subunit 0.57 DDA3937_RS19065 homoserine O-succinyltransferase 0.98 2
Dickeya dianthicola ME23 0.66 DZA65_RS01635 glutamate synthase large subunit 0.57 DZA65_RS20275 homoserine O-succinyltransferase 0.94 7
Escherichia coli ECOR38 0.66 HEPCGN_16760 gltB3 Glutamate synthase domain 3 0.57 HEPCGN_11915 metA homoserine O-succinyltransferase 0.88 51
Escherichia coli Nissle 1917 0.66 ECOLIN_RS18475 glutamate synthase large subunit 0.56 ECOLIN_RS25515 homoserine O-succinyltransferase — —
Escherichia fergusonii Becca 0.66 EFB2_00611 Glutamate synthase [NADPH] large chain 0.56 EFB2_04597 Homoserine O-succinyltransferase low > 86
Escherichia coli BL21 0.66 ECD_03077 glutamate synthase, large subunit 0.56 ECD_03885 homoserine O-transsuccinylase low > 61
Escherichia coli ECRC62 0.66 BNILDI_01850 gltB glutamate synthase large subunit 0.57 BNILDI_06100 metA homoserine O-succinyltransferase 0.88 63
Escherichia coli BW25113 0.66 b3212 gltB glutamate synthase, large subunit (NCBI) 0.56 b4013 metA homoserine O-succinyltransferase (NCBI) low > 76
Klebsiella michiganensis M5al 0.66 BWI76_RS25315 glutamate synthase large subunit 0.55 BWI76_RS01655 homoserine O-succinyltransferase 0.65 29
Escherichia coli ECRC102 0.66 NIAGMN_15645 gltB glutamate synthase large subunit 0.57 NIAGMN_11025 metA homoserine O-succinyltransferase — —
Escherichia coli ECRC100 0.66 OKFHMN_17885 gltB glutamate synthase large subunit 0.57 OKFHMN_13275 metA homoserine O-succinyltransferase 0.88 59
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_00488 Glutamate synthase [NADPH] large chain 0.57 OHPLBJKB_04037 Homoserine O-succinyltransferase low > 73
Escherichia coli ECRC98 0.66 JDDGAC_21510 gltB glutamate synthase large subunit 0.57 JDDGAC_16900 metA homoserine O-succinyltransferase 0.90 38
Escherichia coli ECRC101 0.66 MCAODC_08405 gltB glutamate synthase large subunit 0.57 MCAODC_03775 metA homoserine O-succinyltransferase low > 87
Escherichia coli ECRC99 0.66 KEDOAH_10265 gltB glutamate synthase large subunit 0.57 KEDOAH_14885 metA homoserine O-succinyltransferase — —
Escherichia coli ECOR27 0.66 NOLOHH_09685 gltB glutamate synthase large subunit 0.57 NOLOHH_05420 metA homoserine O-succinyltransferase 0.98 1
Enterobacter sp. TBS_079 0.66 MPMX20_04126 Glutamate synthase [NADPH] large chain 0.55 MPMX20_00230 Homoserine O-succinyltransferase 0.65 27
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF2956 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) 0.55 GFF1350 Homoserine O-succinyltransferase (EC 2.3.1.46) low > 78
Enterobacter asburiae PDN3 0.66 EX28DRAFT_3275 Glutamate synthase domain 2 0.55 EX28DRAFT_4331 homoserine O-succinyltransferase (EC 2.3.1.46) 0.63 52
Parabacteroides merdae CL09T00C40 0.41 HMPREF1078_RS01270 glutamate synthase large subunit 0.53 HMPREF1078_RS10000 homoserine O-succinyltransferase low > 61
Synechococcus elongatus PCC 7942 0.41 Synpcc7942_0890 glsF glutamate synthase (ferredoxin) 0.44 Synpcc7942_0371 metA homoserine O-succinyltransferase — —
Bacteroides ovatus ATCC 8483 0.41 BACOVA_03756 class II glutamine amidotransferase 0.55 BACOVA_03007 homoserine O-succinyltransferase low > 94
Phocaeicola vulgatus CL09T03C04 0.41 HMPREF1058_RS06920 glutamate synthase large subunit 0.54 HMPREF1058_RS14680 homoserine O-succinyltransferase low > 67
Bacteroides thetaiotaomicron VPI-5482 0.41 BT0553 glutamate synthase, large subunit (NCBI ptt file) 0.55 BT2413 homoserine O-succinyltransferase (NCBI ptt file) 0.44 37
Bacteroides stercoris CC31F 0.41 HMPREF1181_RS16055 glutamate synthase large subunit 0.54 HMPREF1181_RS00105 homoserine O-succinyltransferase low > 56
Phocaeicola dorei CL03T12C01 0.41 ABI39_RS20685 glutamate synthase large subunit 0.53 ABI39_RS10360 homoserine O-succinyltransferase low > 72
Rhizobium sp. OAE497 0.40 ABIE40_RS16275 glutamate synthase large subunit 0.45 ABIE40_RS18590 homoserine O-succinyltransferase — —
Sinorhizobium meliloti 1021 0.40 SMc04028 glutamate synthase 0.43 SMc03797 homoserine O-succinyltransferase 0.91 2
Agrobacterium fabrum C58 0.40 Atu3784 glutamate synthase large subunit 0.45 Atu2718 homoserine O-succinyltransferase 0.83 17
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS28010 glutamate synthase-related protein 0.36 QEN71_RS42530 homoserine O-succinyltransferase low > 153
Phaeobacter inhibens DSM 17395 0.39 PGA1_c36100 glutamate synthase [NADPH] large chain 0.45 PGA1_c14560 homoserine O-succinyltransferase MetA 0.63 41
Dinoroseobacter shibae DFL-12 0.38 Dshi_0002 Glutamate synthase (ferredoxin) (RefSeq) 0.45 Dshi_1593 Homoserine O-succinyltransferase (RefSeq) — —
Bifidobacterium breve UCC2003 0.37 BBR_RS15255 glutamate synthase large subunit 0.43 BBR_RS11990 homoserine O-succinyltransferase 0.59 6

Not shown: 49 genomes with orthologs for Sama_0857 only; 2 genomes with orthologs for Sama_1374 only