Conservation of cofitness between Sama_2069 and Sama_0761 in Shewanella amazonensis SB2B

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_2069 MarR family transcriptional regulator (RefSeq) 1.0 Sama_0761 iron-compound ABC transporter, permease protein (RefSeq) 0.49 16
Shewanella sp. ANA-3 0.83 Shewana3_1739 MarR family transcriptional regulator (RefSeq) 0.56 Shewana3_3279 Vitamin B12 transporter, permease component (fecCD-like) (from data) low > 73
Shewanella oneidensis MR-1 0.82 SO2640 transcriptional regulator, MarR family (NCBI ptt file) 0.60 SO1034 iron-compound ABC transporter, permease protein (NCBI ptt file) 0.47 12
Shewanella loihica PV-4 0.78 Shew_1552 MarR family transcriptional regulator (RefSeq) 0.59 Shew_0713 transport system permease protein (RefSeq)
Rhizobium sp. OAE497 0.27 ABIE40_RS00485 MarR family winged helix-turn-helix transcriptional regulator 0.27 ABIE40_RS14430 iron ABC transporter permease
Sinorhizobium meliloti 1021 0.25 SMc02851 transcriptional regulator 0.26 SMc01511 hemin transport system permease transmembrane protein low > 103
Variovorax sp. SCN45 0.24 GFF4768 Transcriptional regulator, MarR family 0.17 GFF872 Hemin ABC transporter, permease protein low > 127
Agrobacterium fabrum C58 0.23 Atu0109 transcriptional regulator, MarR family 0.23 Atu3395 iron (III ABC transporter permease ABC transporter permease low > 89
Pseudomonas fluorescens GW456-L13 0.22 PfGW456L13_3467 Transcriptional regulator, MarR family 0.33 PfGW456L13_80 ABC transporter (iron.B12.siderophore.hemin) , permease component low > 87
Pseudomonas fluorescens FW300-N2E3 0.22 AO353_18435 MarR family transcriptional regulator 0.32 AO353_13550 ABC transporter permease
Pseudomonas putida KT2440 0.22 PP_4515 Transcriptional regulator, MarR family 0.23 PP_2417 putative Iron ABC transporter, permease protein low > 96
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS10020 MFS transporter 0.19 BPHYT_RS04855 iron ABC transporter
Marinobacter adhaerens HP15 0.21 HP15_3821 transcriptional regulator, MarR family 0.23 HP15_2998 hemin ABC transporter, permease protein low > 73
Pseudomonas simiae WCS417 0.21 PS417_19945 MarR family transcriptional regulator 0.32 PS417_02845 ABC transporter permease low > 88
Azospirillum brasilense Sp245 0.21 AZOBR_RS02005 transcriptional regulator 0.17 AZOBR_RS19150 ABC transporter permease
Pseudomonas sp. RS175 0.21 PFR28_00789 Transcriptional regulator SlyA 0.32 PFR28_05188 Hemin transport system permease protein HmuU
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS21915 MarR family transcriptional regulator 0.33 PFLU_RS02915 iron ABC transporter permease low > 109
Pseudomonas fluorescens SBW25 0.21 PFLU_RS21915 MarR family transcriptional regulator 0.33 PFLU_RS02915 iron ABC transporter permease low > 109
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_04045 MarR family transcriptional regulator 0.24 AO356_16425 ABC transporter permease
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_2644 Transcriptional regulator SlyA 0.32 Pf6N2E2_3546 ABC transporter (iron.B12.siderophore.hemin) , permease component
Desulfovibrio vulgaris Miyazaki F 0.21 DvMF_1558 transcriptional regulator, MarR family (RefSeq) 0.17 DvMF_1497 transport system permease protein (RefSeq) low > 51
Escherichia coli Nissle 1917 0.20 ECOLIN_RS09160 transcriptional regulator SlyA 0.20 ECOLIN_RS25775 Fe(3+) dicitrate ABC transporter permease subunit FecD
Escherichia fergusonii Becca 0.20 EFB2_02350 Transcriptional regulator SlyA 0.19 EFB2_00303 Hemin transport system permease protein HmuU low > 86
Rhodospirillum rubrum S1H 0.20 Rru_A1441 Transcriptional Regulator, MarR family (NCBI) 0.20 Rru_A1137 transport system permease protein (NCBI) low > 58
Escherichia coli ECOR38 0.20 HEPCGN_05860 slyA transcriptional regulator SlyA 0.20 HEPCGN_09805 fecD Fe(3+) dicitrate ABC transporter permease subunit FecD low > 87
Dyella japonica UNC79MFTsu3.2 0.20 ABZR86_RS14780 MarR family transcriptional regulator 0.16 ABZR86_RS04590 iron ABC transporter permease low > 74
Escherichia coli ECRC102 0.19 NIAGMN_00590 slyA transcriptional regulator SlyA 0.19 NIAGMN_14090 chuU heme permease protein ChuU
Escherichia coli ECRC101 0.19 MCAODC_17935 slyA transcriptional regulator SlyA 0.19 MCAODC_06840 chuU heme permease protein ChuU low > 87
Escherichia coli BW25113 0.19 b1642 slyA transcriptional regulator for cryptic hemolysin (VIMSS) 0.20 b4288 fecD KpLE2 phage-like element; iron-dicitrate transporter subunit (NCBI) low > 76
Sphingomonas koreensis DSMZ 15582 0.19 Ga0059261_4007 Transcriptional regulators 0.18 Ga0059261_0623 ABC-type Fe3+-siderophore transport system, permease component low > 68
Escherichia coli ECRC98 0.19 JDDGAC_02065 slyA transcriptional regulator SlyA 0.19 JDDGAC_19955 chuU heme permease protein ChuU low > 86
Escherichia coli BL21 0.19 ECD_01612 global transcriptional regulator 0.20 ECD_04154 ferric citrate ABC transporter permease
Escherichia coli ECRC99 0.19 KEDOAH_00630 slyA transcriptional regulator SlyA 0.19 KEDOAH_11820 chuU heme permease protein ChuU
Escherichia coli ECRC100 0.19 OKFHMN_27475 slyA transcriptional regulator SlyA 0.19 OKFHMN_16325 chuU heme permease protein ChuU
Fusobacterium nucleatum SB010 0.19 HUW76_01080 MarR family transcriptional regulator 0.24 HUW76_04685 iron ABC transporter permease low > 35
Echinicola vietnamensis KMM 6221, DSM 17526 0.18 Echvi_1068 Transcriptional regulators 0.22 Echvi_3111 ABC-type Fe3+-siderophore transport system, permease component low > 79
Pseudomonas sp. S08-1 0.18 OH686_20685 Transcriptional regulator SlyA 0.15 OH686_17300 Heme ABC transporter, permease protein HmuU

Not shown: 8 genomes with orthologs for Sama_2069 only; 42 genomes with orthologs for Sama_0761 only