Conservation of cofitness between Sama_0176 and Sama_0170 in Shewanella amazonensis SB2B

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_0176 general secretion pathway protein K (RefSeq) 1.0 Sama_0170 general secretion pathway protein E (RefSeq) 0.87 2
Shewanella sp. ANA-3 0.76 Shewana3_0158 general secretion pathway protein K (RefSeq) 0.86 Shewana3_0152 type II secretion system protein E (GspE) (RefSeq) 0.96 1
Shewanella oneidensis MR-1 0.76 SO0173 gspK general secretion pathway protein K (NCBI ptt file) 0.86 SO0167 gspE general secretion pathway protein E (NCBI ptt file) 0.94 1
Shewanella loihica PV-4 0.74 Shew_3612 general secretion pathway protein K (RefSeq) 0.86 Shew_3618 general secretory pathway protein E (RefSeq) 0.72 4
Alteromonas macleodii MIT1002 0.31 MIT1002_03983 Putative general secretion pathway protein K 0.67 MIT1002_03977 Type II traffic warden ATPase 0.98 1
Dickeya dianthicola 67-19 0.30 HGI48_RS14700 type II secretion system minor pseudopilin GspK 0.63 HGI48_RS14730 type II secretion system ATPase GspE low > 71
Dickeya dadantii 3937 0.30 DDA3937_RS14765 type II secretion system minor pseudopilin GspK 0.63 DDA3937_RS14795 type II secretion system ATPase GspE 0.68 5
Dickeya dianthicola ME23 0.29 DZA65_RS15645 type II secretion system minor pseudopilin GspK 0.63 DZA65_RS15675 type II secretion system ATPase GspE 0.78 63
Pectobacterium carotovorum WPP14 0.29 HER17_RS06720 type II secretion system minor pseudopilin GspK 0.58 HER17_RS06690 type II secretion system ATPase GspE low > 75
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_00179 type II secretion pathway protein K 0.47 CCNA_00173 type II secretion pathway protein E low > 67
Caulobacter crescentus NA1000 0.27 CCNA_00179 type II secretion pathway protein K 0.47 CCNA_00173 type II secretion pathway protein E low > 66
Vibrio cholerae E7946 ATCC 55056 0.26 CSW01_13755 type II secretion system protein K 0.67 CSW01_13785 type II secretion system protein GspE — —
Escherichia coli BL21 0.26 ECD_02831 putative type II secretion protein GspK 0.61 ECD_02837 putative type II secretion protein GspE 0.97 2
Escherichia coli HS(pFamp)R (ATCC 700891) 0.25 OHPLBJKB_00746 Putative type II secretion system protein K 0.59 OHPLBJKB_00740 Type II secretion system protein E low > 73
Escherichia fergusonii Becca 0.24 EFB2_00852 Putative type II secretion system protein K 0.61 EFB2_00846 Type II secretion system protein E low > 86
Escherichia coli ECOR38 0.24 HEPCGN_18085 gspK general secretion pathway protein K 0.62 HEPCGN_18055 gspE general secretion pathway protein E 0.93 7
Escherichia coli ECOR27 0.24 NOLOHH_11010 gspK general secretion pathway protein K 0.62 NOLOHH_10980 gspE general secretion pathway protein E low > 57
Kangiella aquimarina DSM 16071 0.23 B158DRAFT_0696 Type II secretory pathway, component PulK 0.63 B158DRAFT_0690 general secretory pathway protein E 0.90 3
Pseudomonas stutzeri RCH2 0.22 Psest_4196 Type II secretory pathway, component PulK 0.57 Psest_4202 general secretory pathway protein E 0.27 1
Escherichia coli ECRC101 0.22 MCAODC_15300 gspK type II secretion system minor pseudopilin GspK 0.59 MCAODC_15270 gspE type II secretion system ATPase GspE — —
Escherichia coli ECRC101 0.22 OKFHMN_00250 gspK type II secretion system minor pseudopilin GspK 0.59 OKFHMN_00280 gspE type II secretion system ATPase GspE — —
Escherichia coli ECRC98 0.22 JDDGAC_30330 gspK type II secretion system minor pseudopilin GspK 0.59 JDDGAC_30300 gspE type II secretion system ATPase GspE — —
Escherichia coli ECRC102 0.22 NIAGMN_28570 gspK type II secretion system minor pseudopilin GspK 0.59 NIAGMN_28600 gspE type II secretion system ATPase GspE — —
Marinobacter adhaerens HP15 0.21 HP15_1608 general secretion pathway protein K-like protein 0.58 HP15_1602 type II secretion system protein E 0.68 8
Xanthomonas campestris pv. campestris strain 8004 0.21 Xcc-8004.949.1 General secretion pathway protein K 0.47 Xcc-8004.943.1 General secretion pathway protein E low > 74
Pseudomonas sp. S08-1 0.21 OH686_11755 General secretion pathway protein K 0.59 OH686_11785 type II secretion system protein E low > 80
Klebsiella michiganensis M5al 0.20 BWI76_RS05055 type II secretion system protein K 0.59 BWI76_RS05085 general secretion pathway protein GspE 0.29 6
Escherichia coli BW25113 0.19 b3332 gspK general secretory pathway component, cryptic (NCBI) 0.54 b3326 gspE general secretory pathway component, cryptic (NCBI) 0.31 2
Acinetobacter radioresistens SK82 0.19 MPMX26_01229 Type II secretion system protein K 0.54 MPMX26_00578 Type II secretion system protein E — —
Rahnella sp. WP5 0.16 EX31_RS16200 type II secretion system minor pseudopilin GspK 0.56 EX31_RS16170 type II secretion system ATPase GspE low > 89
Enterobacter asburiae PDN3 0.15 EX28DRAFT_2072 Type II secretory pathway, component PulK 0.54 EX28DRAFT_2078 type II secretion system protein E low > 76
Pseudomonas putida KT2440 0.13 PP_1042 Type II secretion system protein K 0.48 PP_1047 putative protein secretion protein for export low > 96
Pseudomonas fluorescens FW300-N2E3 0.11 AO353_12580 type II secretory protein PulK 0.54 AO353_12550 type II secretion system protein GspE low > 101
Pseudomonas fluorescens FW300-N2C3 0.10 AO356_24775 HxcX atypical pseudopilin 0.54 AO356_09340 type II secretion system protein GspE low > 104
Ralstonia sp. UNC404CL21Col 0.09 ABZR87_RS03430 type II secretion system minor pseudopilin GspK 0.50 ABZR87_RS03455 type II secretion system ATPase GspE 0.97 2
Pseudomonas fluorescens SBW25-INTG 0.09 PFLU_RS15765 general secretion pathway protein GspK 0.49 PFLU_RS15745 type II secretion system ATPase GspE low > 109
Pseudomonas fluorescens SBW25 0.09 PFLU_RS15765 general secretion pathway protein GspK 0.49 PFLU_RS15745 type II secretion system ATPase GspE low > 109
Cupriavidus basilensis FW507-4G11 0.09 RR42_RS19500 general secretion pathway protein GspK 0.51 RR42_RS19525 general secretion pathway protein GspE 0.93 7
Pseudomonas fluorescens FW300-N2E2 0.08 Pf6N2E2_648 General secretion pathway protein K 0.54 Pf6N2E2_3745 General secretion pathway protein E low > 103
Pseudomonas simiae WCS417 0.08 PS417_11280 HxcX atypical pseudopilin 0.49 PS417_11300 general secretion pathway protein GspE low > 88

Not shown: 0 genomes with orthologs for Sama_0176 only; 20 genomes with orthologs for Sama_0170 only