Conservation of cofitness between Shew_2934 and Shew_1344 in Shewanella loihica PV-4

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_2934 SPOUT methyltransferase superfamily protein (RefSeq) 1.0 Shew_1344 MCP methyltransferase, CheR-type (RefSeq) 0.62 6
Shewanella amazonensis SB2B 0.94 Sama_2587 rRNA large subunit methyltransferase (RefSeq) 0.90 Sama_2319 protein-glutamate O-methyltransferase (RefSeq) low > 62
Shewanella sp. ANA-3 0.93 Shewana3_0996 rRNA large subunit methyltransferase (RefSeq) 0.91 Shewana3_1320 MCP methyltransferase, CheR-type (RefSeq) low > 73
Shewanella oneidensis MR-1 0.93 SO1169 conserved hypothetical protein TIGR00246 (NCBI ptt file) 0.91 SO3251 cheR-2 chemotaxis protein methyltransferase CheR (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.81 CSW01_04865 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.65 CSW01_11230 chemotaxis protein methyltransferase 1 low > 62
Alteromonas macleodii MIT1002 0.76 MIT1002_01852 Ribosomal RNA large subunit methyltransferase H 0.59 MIT1002_01038 Chemotaxis protein methyltransferase — —
Kangiella aquimarina DSM 16071 0.61 B158DRAFT_0085 rRNA large subunit m3Psi methyltransferase RlmH 0.17 B158DRAFT_0184 Methylase of chemotaxis methyl-accepting proteins low > 40
Marinobacter adhaerens HP15 0.61 HP15_604 conserved hypothetical protein CHP00246 0.49 HP15_1548 chemotaxis protein methyltransferase CheR low > 73
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_4366 Protein of unknown function DUF163 0.53 Psyr_3485 MCP methyltransferase, CheR-type low > 86
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_4366 Protein of unknown function DUF163 0.53 Psyr_3485 MCP methyltransferase, CheR-type — —
Pseudomonas putida KT2440 0.60 PP_4808 23S rRNA m3psi1915 methyltransferase 0.53 PP_4392 chemotaxis protein methyltransferase low > 96
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS26660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.52 PFLU_RS23185 protein-glutamate O-methyltransferase CheR low > 109
Pseudomonas simiae WCS417 0.60 PS417_24730 50S rRNA methyltransferase 0.53 PS417_21575 chemotaxis protein — —
Pseudomonas fluorescens SBW25 0.60 PFLU_RS26660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.52 PFLU_RS23185 protein-glutamate O-methyltransferase CheR low > 109
Pseudomonas sp. RS175 0.60 PFR28_03869 Ribosomal RNA large subunit methyltransferase H 0.53 PFR28_03255 Chemotaxis protein methyltransferase Cher2 low > 88
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_2691 LSU m3Psi1915 methyltransferase RlmH 0.53 Pf1N1B4_3471 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) — —
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_4996 LSU m3Psi1915 methyltransferase RlmH 0.54 Pf6N2E2_5693 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) low > 103
Pseudomonas sp. S08-1 0.59 OH686_09325 rRNA large subunit m3Psi methyltransferase RlmH 0.55 OH686_02980 Chemotaxis protein methyltransferase CheR low > 80
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_06480 50S rRNA methyltransferase 0.53 AO353_02865 chemotaxis protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_15305 50S rRNA methyltransferase 0.54 AO356_18910 chemotaxis protein low > 104
Pseudomonas fluorescens GW456-L13 0.59 PfGW456L13_1359 LSU m3Psi1915 methyltransferase RlmH 0.53 PfGW456L13_2000 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) low > 87
Pseudomonas stutzeri RCH2 0.57 Psest_0511 rRNA large subunit m3Psi methyltransferase RlmH 0.50 Psest_2969 Methylase of chemotaxis methyl-accepting proteins low > 67
Mucilaginibacter yixingensis YX-36 DSM 26809 0.30 ABZR88_RS17055 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.17 ABZR88_RS10440 protein-glutamate O-methyltransferase CheR low > 71
Pedobacter sp. GW460-11-11-14-LB5 0.29 CA265_RS16470 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.16 CA265_RS21635 chemotaxis protein CheR — —
Azospirillum brasilense Sp245 0.28 AZOBR_RS04060 50S rRNA methyltransferase 0.33 AZOBR_RS20100 chemotaxis protein CheR low > 97
Magnetospirillum magneticum AMB-1 0.26 AMB_RS20655 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.29 AMB_RS01630 methyltransferase domain-containing protein low > 64
Azospirillum sp. SherDot2 0.26 MPMX19_01940 Ribosomal RNA large subunit methyltransferase H 0.33 MPMX19_05684 Chemotaxis protein methyltransferase 1 low > 112
Rhodospirillum rubrum S1H 0.26 Rru_A1235 Protein of unknown function DUF163 (NCBI) 0.29 Rru_A0524 MCP methyltransferase, CheR-type (NCBI) low > 58
Rhodopseudomonas palustris CGA009 0.23 TX73_000870 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.36 TX73_008625 protein-glutamate O-methyltransferase CheR low > 86
Bosea sp. OAE506 0.20 ABIE41_RS07565 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.31 ABIE41_RS10975 protein-glutamate O-methyltransferase CheR low > 77

Not shown: 65 genomes with orthologs for Shew_2934 only; 3 genomes with orthologs for Shew_1344 only