Conservation of cofitness between Dshi_1599 and Dshi_1638 in Dinoroseobacter shibae DFL-12

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dinoroseobacter shibae DFL-12 1.0 Dshi_1599 binding-protein-dependent transport systems inner membrane component (RefSeq) 1.0 Dshi_1638 small multidrug resistance protein (RefSeq) 0.36 4
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_25425 ABC transporter permease 0.45 AO353_12990 multidrug DMT transporter low > 101
Vibrio cholerae E7946 ATCC 55056 0.31 CSW01_07155 spermidine/putrescine ABC transporter permease PotB 0.26 CSW01_06990 QacE family quaternary ammonium compound efflux SMR transporter low > 62
Enterobacter sp. TBS_079 0.31 MPMX20_01806 Spermidine/putrescine transport system permease protein PotB 0.24 MPMX20_00430 Guanidinium exporter low > 85
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_1568 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) 0.47 PfGW456L13_191 Ethidium bromide-methyl viologen resistance protein EmrE low > 87
Pectobacterium carotovorum WPP14 0.31 HER17_RS11665 spermidine/putrescine ABC transporter permease PotB 0.43 HER17_RS07420 SMR family transporter low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF3409 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) 0.54 GFF2645 Ethidium bromide-methyl viologen resistance protein EmrE low > 78
Escherichia coli BL21 0.30 ECD_01123 spermidine/putrescine ABC transporter permease 0.45 ECD_00493 DLP12 prophage; multidrug resistance protein — —
Escherichia coli ECRC62 0.30 BNILDI_19105 potB spermidine/putrescine ABC transporter permease PotB 0.25 BNILDI_17005 mdtI multidrug/spermidine efflux SMR transporter subunit MdtI low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_02543 Spermidine/putrescine transport system permease protein PotB 0.45 OHPLBJKB_01793 Multidrug transporter EmrE low > 73
Escherichia coli BW25113 0.30 b1125 potB spermidine/putrescine ABC transporter membrane protein (NCBI) 0.46 b0543 emrE multidrug efflux protein (NCBI) low > 76
Escherichia coli ECOR27 0.30 NOLOHH_20940 potB spermidine/putrescine ABC transporter permease PotB 0.25 NOLOHH_18215 mdtI multidrug/spermidine efflux SMR transporter subunit MdtI — —
Escherichia fergusonii Becca 0.30 EFB2_02850 Spermidine/putrescine transport system permease protein PotB 0.45 EFB2_02010 Multidrug transporter EmrE low > 86
Escherichia coli ECOR38 0.30 HEPCGN_24070 potB spermidine/putrescine ABC transporter permease PotB 0.34 HEPCGN_14150 emrE QacE family quaternary ammonium compound efflux SMR transporter low > 87
Escherichia coli ECRC98 0.30 JDDGAC_06745 potB spermidine/putrescine ABC transporter permease PotB 0.46 JDDGAC_06575 emrE multidrug efflux SMR transporter EmrE low > 86
Escherichia coli ECRC102 0.30 NIAGMN_24745 potB spermidine/putrescine ABC transporter permease PotB 0.46 NIAGMN_24935 emrE multidrug efflux SMR transporter EmrE — —
Escherichia coli ECRC101 0.30 MCAODC_22465 potB spermidine/putrescine ABC transporter permease PotB 0.47 MCAODC_14880 emrE multidrug efflux SMR transporter EmrE low > 87
Escherichia coli ECRC100 0.30 OKFHMN_00620 potB spermidine/putrescine ABC transporter permease PotB 0.46 OKFHMN_00790 emrE multidrug efflux SMR transporter EmrE — —
Escherichia coli ECRC99 0.30 KEDOAH_24705 potB spermidine/putrescine ABC transporter permease PotB 0.46 KEDOAH_24875 emrE multidrug efflux SMR transporter EmrE — —
Caulobacter crescentus NA1000 Δfur 0.30 CCNA_03238 ABC-type spermidine/putrescine transport system, permease component II 0.29 CCNA_03556 multidrug efflux system protein low > 67
Caulobacter crescentus NA1000 0.30 CCNA_03238 ABC-type spermidine/putrescine transport system, permease component II 0.29 CCNA_03556 multidrug efflux system protein low > 66
Enterobacter asburiae PDN3 0.30 EX28DRAFT_1805 ABC-type spermidine/putrescine transport system, permease component I 0.26 EX28DRAFT_3348 Membrane transporters of cations and cationic drugs low > 76
Dickeya dianthicola ME23 0.30 DZA65_RS09800 putrescine ABC transporter permease PotH 0.55 DZA65_RS06650 multidrug transporter low > 75
Klebsiella michiganensis M5al 0.30 BWI76_RS11250 spermidine/putrescine ABC transporter permease PotB 0.37 BWI76_RS03545 QacE family quaternary ammonium compound efflux SMR transporter low > 92
Dickeya dianthicola 67-19 0.29 HGI48_RS09490 putrescine ABC transporter permease PotH 0.57 HGI48_RS06305 multidrug efflux SMR transporter low > 71
Azospirillum sp. SherDot2 0.29 MPMX19_03603 hypothetical protein 0.37 MPMX19_00112 Multidrug transporter EmrE low > 112
Dickeya dadantii 3937 0.29 DDA3937_RS09470 putrescine ABC transporter permease PotH 0.56 DDA3937_RS06260 multidrug efflux SMR transporter low > 74
Pantoea sp. MT58 0.29 IAI47_13035 putrescine ABC transporter permease PotH 0.26 IAI47_08635 multidrug/spermidine efflux SMR transporter subunit MdtI low > 76
Pseudomonas sp. S08-1 0.29 OH686_11315 Spermidine/putrescine import ABC transporter permease protein PotB 0.55 OH686_09575 small multidrug resistance family (SMR) protein low > 80
Paraburkholderia bryophila 376MFSha3.1 0.28 H281DRAFT_05182 putrescine transport system permease protein 0.54 H281DRAFT_00749 small multidrug resistance pump low > 103
Paraburkholderia graminis OAS925 0.28 ABIE53_002368 putrescine transport system permease protein 0.53 ABIE53_001959 small multidrug resistance pump low > 113
Burkholderia phytofirmans PsJN 0.28 BPHYT_RS11440 putrescine/spermidine ABC transporter permease 0.53 BPHYT_RS08595 multidrug transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS28760 ABC transporter permease subunit 0.47 PFLU_RS02410 multidrug efflux SMR transporter low > 109
Pseudomonas sp. RS175 0.28 PFR28_04292 Putrescine transport system permease protein PotH 0.45 PFR28_05087 Multidrug transporter low > 88
Rahnella sp. WP5 0.28 EX31_RS09620 putrescine ABC transporter permease PotH 0.46 EX31_RS02410 multidrug DMT transporter low > 89
Pseudomonas fluorescens SBW25 0.28 PFLU_RS28760 ABC transporter permease subunit 0.47 PFLU_RS02410 multidrug efflux SMR transporter low > 109
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_4516 Putrescine transport system permease protein PotH (TC 3.A.1.11.2) 0.45 Pf6N2E2_3648 Ethidium bromide-methyl viologen resistance protein EmrE low > 103
Pseudomonas simiae WCS417 0.27 PS417_27110 spermidine/putrescine ABC transporter permease 0.47 PS417_02335 multidrug DMT transporter low > 88
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_13170 spermidine/putrescine ABC transporter permease 0.46 AO356_08830 multidrug DMT transporter low > 104
Pseudomonas putida KT2440 0.27 PP_5178 spermidine/putrescine ABC transporter - inner membrane subunit 0.48 PP_4930 putative small multidrug resistance protein low > 96
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_4862 Binding-protein-dependent transport systems inner membrane component 0.49 Psyr_0541 Small multidrug resistance protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_4862 Binding-protein-dependent transport systems inner membrane component 0.49 Psyr_0541 Small multidrug resistance protein low > 86
Desulfovibrio vulgaris Hildenborough JW710 0.26 DVU0097 potB polyamine ABC transporter, permease protein (TIGR) 0.30 DVU1996 quaternary ammonium compound-resistance protein QacC, putative (TIGR) low > 55
Agrobacterium fabrum C58 0.26 Atu3087 spermidine/putrescine ABC transporter permease 0.51 Atu2319 quaternary ammonium compound-resistance protein low > 89
Acidovorax sp. GW101-3H11 0.25 Ac3H11_1004 ABC transporter permease protein 0.57 Ac3H11_2948 Ethidium bromide-methyl viologen resistance protein EmrE low > 79
Variovorax sp. SCN45 0.23 GFF4721 ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron) 0.52 GFF2129 small multidrug resistance family (SMR) protein low > 127

Not shown: 10 genomes with orthologs for Dshi_1599 only; 29 genomes with orthologs for Dshi_1638 only