Conservation of cofitness between BT4561 and BT2078 in Bacteroides thetaiotaomicron VPI-5482

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT4561 conserved hypothetical protein, putative integral membrane protein (NCBI ptt file) 1.0 BT2078 dihydroxy-acid dehydratase (NCBI ptt file) 0.33 18
Bacteroides ovatus ATCC 8483 0.87 BACOVA_05361 hypothetical protein 0.94 BACOVA_03302 dihydroxy-acid dehydratase low > 94
Bacteroides stercoris CC31F 0.77 HMPREF1181_RS13315 manganese efflux pump 0.91 HMPREF1181_RS08335 dihydroxy-acid dehydratase low > 56
Phocaeicola vulgatus CL09T03C04 0.64 HMPREF1058_RS17185 manganese efflux pump 0.89 HMPREF1058_RS16815 dihydroxy-acid dehydratase low > 67
Phocaeicola dorei CL03T12C01 0.63 ABI39_RS13185 manganese efflux pump 0.88 ABI39_RS12715 dihydroxy-acid dehydratase low > 72
Desulfovibrio vulgaris Hildenborough JW710 0.38 DVU2910 membrane protein, putative (TIGR) 0.40 DVU3373 ilvD dihydroxy-acid dehydratase (TIGR) low > 55
Parabacteroides merdae CL09T00C40 0.33 HMPREF1078_RS10455 manganese efflux pump MntP family protein 0.83 HMPREF1078_RS16695 dihydroxy-acid dehydratase low > 61
Azospirillum sp. SherDot2 0.32 MPMX19_04144 putative manganese efflux pump MntP 0.61 MPMX19_05356 Dihydroxy-acid dehydratase — —
Dickeya dianthicola 67-19 0.32 HGI48_RS11335 manganese efflux pump MntP 0.63 HGI48_RS20295 dihydroxy-acid dehydratase low > 71
Dickeya dianthicola ME23 0.32 DZA65_RS11680 manganese efflux pump MntP 0.62 DZA65_RS21335 dihydroxy-acid dehydratase low > 75
Pantoea sp. MT58 0.32 IAI47_01120 manganese efflux pump MntP 0.62 IAI47_01035 dihydroxy-acid dehydratase low > 76
Pectobacterium carotovorum WPP14 0.32 HER17_RS11345 manganese efflux pump MntP 0.62 HER17_RS01075 dihydroxy-acid dehydratase low > 75
Dickeya dadantii 3937 0.31 DDA3937_RS11300 manganese efflux pump MntP 0.62 DDA3937_RS20155 dihydroxy-acid dehydratase low > 74
Burkholderia phytofirmans PsJN 0.31 BPHYT_RS33240 membrane protein 0.63 BPHYT_RS10100 dihydroxy-acid dehydratase low > 109
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_01909 putative manganese efflux pump MntP 0.64 OHPLBJKB_04282 Dihydroxy-acid dehydratase low > 73
Escherichia coli ECRC62 0.31 BNILDI_15810 mntP manganese efflux pump MntP 0.64 BNILDI_04750 ilvD dihydroxy-acid dehydratase — —
Escherichia fergusonii Becca 0.31 EFB2_02179 putative manganese efflux pump MntP 0.65 EFB2_04865 Dihydroxy-acid dehydratase low > 86
Escherichia coli ECOR27 0.31 NOLOHH_17030 mntP manganese efflux pump MntP 0.64 NOLOHH_06775 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC99 0.31 KEDOAH_01600 mntP manganese efflux pump MntP 0.64 KEDOAH_13510 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC98 0.31 JDDGAC_01080 mntP manganese efflux pump MntP 0.64 JDDGAC_18260 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC102 0.31 NIAGMN_01555 mntP manganese efflux pump MntP 0.64 NIAGMN_12395 ilvD dihydroxy-acid dehydratase — —
Escherichia coli BW25113 0.31 b1821 b1821 orf, hypothetical protein (VIMSS) 0.64 b3771 ilvD dihydroxy-acid dehydratase (NCBI) low > 76
Escherichia coli ECRC101 0.31 OKFHMN_26505 mntP manganese efflux pump MntP 0.64 OKFHMN_14640 ilvD dihydroxy-acid dehydratase — —
Escherichia coli BL21 0.31 ECD_01791 putative Mn(2+) efflux pump, mntR-regulated 0.64 ECD_03649 dihydroxyacid dehydratase — —
Escherichia coli ECRC101 0.31 MCAODC_18900 mntP manganese efflux pump MntP 0.64 MCAODC_05145 ilvD dihydroxy-acid dehydratase — —
Escherichia coli Nissle 1917 0.31 ECOLIN_RS10135 manganese efflux pump MntP 0.65 ECOLIN_RS21665 dihydroxy-acid dehydratase — —
Enterobacter asburiae PDN3 0.30 EX28DRAFT_0738 Predicted membrane protein 0.64 EX28DRAFT_4443 dihydroxy-acid dehydratase low > 76
Escherichia coli ECOR38 0.30 HEPCGN_04905 mntP manganese efflux pump MntP 0.64 HEPCGN_13350 ilvD dihydroxy-acid dehydratase low > 85
Rahnella sp. WP5 0.30 EX31_RS00940 manganese efflux pump MntP 0.60 EX31_RS15005 dihydroxy-acid dehydratase low > 89
Klebsiella michiganensis M5al 0.30 BWI76_RS17915 membrane protein 0.64 BWI76_RS00975 dihydroxy-acid dehydratase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF2835 Putative membrane protein 0.64 GFF2901 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 78
Serratia liquefaciens MT49 0.30 IAI46_14830 manganese efflux pump MntP 0.62 IAI46_24345 dihydroxy-acid dehydratase low > 86
Enterobacter sp. TBS_079 0.30 MPMX20_02726 putative manganese efflux pump MntP 0.65 MPMX20_04499 Dihydroxy-acid dehydratase 0.52 9
Erwinia tracheiphila SCR3 0.29 LU632_RS00575 mntP manganese efflux pump MntP 0.62 LU632_RS24400 ilvD dihydroxy-acid dehydratase 0.72 41
Alteromonas macleodii MIT1002 0.29 MIT1002_03268 putative manganese efflux pump MntP 0.63 MIT1002_04041 Dihydroxy-acid dehydratase low > 70
Xanthomonas campestris pv. campestris strain 8004 0.29 Xcc-8004.5174.1 Integral membrane protein 0.63 Xcc-8004.451.1 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.28 A4249_RS06635 manganese efflux pump MntP family protein 0.24 A4249_RS10030 dihydroxy-acid dehydratase 0.98 3
Bifidobacterium breve UCC2003 0.28 BBR_RS11805 hypothetical protein 0.56 BBR_RS17635 dihydroxy-acid dehydratase low > 34
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_1725 Protein of unknown function DUF204 0.62 Psyr_0469 dihydroxyacid dehydratase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_1725 Protein of unknown function DUF204 0.62 Psyr_0469 dihydroxyacid dehydratase low > 86
Variovorax sp. SCN45 0.27 GFF1356 Putative manganese efflux pump MntP 0.29 GFF471 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Herbaspirillum seropedicae SmR1 0.26 HSERO_RS02630 membrane protein 0.63 HSERO_RS02650 dihydroxy-acid dehydratase 0.50 22
Rhodanobacter denitrificans MT42 0.25 LRK55_RS05125 manganese efflux pump MntP family protein 0.25 LRK55_RS09960 dihydroxy-acid dehydratase low > 63
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS05350 manganese efflux pump MntP family protein 0.25 LRK54_RS10320 dihydroxy-acid dehydratase low > 59
Rhodospirillum rubrum S1H 0.24 Rru_A0282 Protein of unknown function DUF204 (NCBI) 0.59 Rru_A1786 Dihydroxy-acid dehydratase (NCBI) low > 58

Not shown: 2 genomes with orthologs for BT4561 only; 57 genomes with orthologs for BT2078 only