Conservation of cofitness between BT2099 and BT1969 in Bacteroides thetaiotaomicron VPI-5482

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT2099 Fe3+ ABC transporter, permease (NCBI ptt file) 1.0 BT1969 NADP-dependent malate dehydrogenase (NCBI ptt file) 0.36 12
Bacteroides ovatus ATCC 8483 0.94 BACOVA_03269 iron chelate uptake ABC transporter, FeCT family, permease protein 0.97 BACOVA_00097 phosphate acetyl/butyryl transferase low > 94
Enterobacter sp. TBS_079 0.25 MPMX20_01915 Hemin transport system permease protein HmuU 0.45 MPMX20_03324 NADP-dependent malic enzyme low > 85
Escherichia coli ECRC98 0.25 JDDGAC_19955 chuU heme permease protein ChuU 0.45 JDDGAC_25950 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase — —
Escherichia coli ECRC101 0.25 OKFHMN_16325 chuU heme permease protein ChuU 0.45 OKFHMN_22005 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase — —
Escherichia coli ECRC102 0.25 NIAGMN_14090 chuU heme permease protein ChuU 0.45 NIAGMN_19775 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase — —
Escherichia coli ECRC99 0.25 KEDOAH_11820 chuU heme permease protein ChuU 0.45 KEDOAH_06215 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase — —
Escherichia coli ECOR38 0.25 HEPCGN_15225 shuU heme ABC transporter permease ShuU/ChuU 0.45 HEPCGN_21175 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 85
Escherichia fergusonii Becca 0.25 EFB2_00303 Hemin transport system permease protein HmuU 0.45 EFB2_01425 NADP-dependent malic enzyme low > 86
Serratia liquefaciens MT49 0.25 IAI46_11075 iron ABC transporter permease 0.43 IAI46_18585 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 86
Sinorhizobium meliloti 1021 0.25 SMc01511 hemin transport system permease transmembrane protein 0.41 SMc01126 malic enzyme low > 103
Escherichia coli ECRC101 0.25 MCAODC_06840 chuU heme permease protein ChuU 0.45 MCAODC_12535 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase — —
Escherichia coli Nissle 1917 0.25 ECOLIN_RS20060 heme ABC transporter permease ShuU/ChuU 0.45 ECOLIN_RS14055 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 52
Rahnella sp. WP5 0.24 EX31_RS13960 iron ABC transporter permease 0.44 EX31_RS20275 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 89
Klebsiella michiganensis M5al 0.24 BWI76_RS17110 vitamin B12 ABC transporter permease BtuC 0.44 BWI76_RS20830 bifunctional malic enzyme oxidoreductase/phosphotransacetylase low > 92
Enterobacter asburiae PDN3 0.23 EX28DRAFT_1718 ABC-type cobalamin transport system, permease component 0.45 EX28DRAFT_0198 Malic enzyme low > 76
Bosea sp. OAE506 0.23 ABIE41_RS01465 iron ABC transporter permease 0.41 ABIE41_RS03635 NADP-dependent malic enzyme low > 77
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF3529 Vitamin B12 ABC transporter, permease component BtuC 0.45 GFF2198 NADP-dependent malic enzyme (EC 1.1.1.40) low > 78
Pectobacterium carotovorum WPP14 0.23 HER17_RS08860 iron ABC transporter permease 0.43 HER17_RS17280 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 75
Dyella japonica UNC79MFTsu3.2 0.22 ABZR86_RS04590 iron ABC transporter permease 0.40 ABZR86_RS12415 NADP-dependent malic enzyme low > 74
Dinoroseobacter shibae DFL-12 0.22 Dshi_0572 transport system permease protein (RefSeq) 0.41 Dshi_3467 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))., Phosphate acetyltransferase (RefSeq) low > 64
Acidovorax sp. GW101-3H11 0.22 Ac3H11_3353 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) 0.40 Ac3H11_4331 NADP-dependent malic enzyme (EC 1.1.1.40) low > 79
Rhodopseudomonas palustris CGA009 0.21 TX73_000770 iron ABC transporter permease 0.36 TX73_015740 NADP-dependent malic enzyme low > 86
Ralstonia solanacearum PSI07 0.21 RPSI07_RS00910 iron ABC transporter permease 0.41 RPSI07_RS11345 NADP-dependent malic enzyme low > 81
Castellaniella sp019104865 MT123 0.21 ABCV34_RS11140 iron ABC transporter permease 0.42 ABCV34_RS01715 NADP-dependent malic enzyme low > 48
Escherichia coli ECOR27 0.21 NOLOHH_17620 btuC vitamin B12 ABC transporter permease BtuC 0.45 NOLOHH_13685 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase — —
Phaeobacter inhibens DSM 17395 0.21 PGA1_c26880 putative iron transport system permease protein 0.40 PGA1_c34990 NADP-dependent malic enzyme — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_02022 Vitamin B12 import system permease protein BtuC 0.45 OHPLBJKB_01268 NADP-dependent malic enzyme low > 73
Escherichia coli BL21 0.21 ECD_01680 vitamin B12 ABC transporter permease 0.45 ECD_02354 malic enzyme: putative oxidoreductase/phosphotransacetylase — —
Escherichia coli BW25113 0.21 b1711 btuC vtamin B12-transporter permease (NCBI) 0.45 b2463 maeB malic enzyme (NCBI) low > 76
Paraburkholderia sabiae LMG 24235 0.20 QEN71_RS31160 iron ABC transporter permease 0.42 QEN71_RS28455 NADP-dependent malic enzyme 0.33 52
Agrobacterium fabrum C58 0.20 Atu2459 ABC transporter, membrane spanning protein (hemin) 0.43 Atu3356 malic enzyme low > 89
Caulobacter crescentus NA1000 0.19 CCNA_01250 FecCD-family transporter protein 0.40 CCNA_02704 NADP-dependent malic enzyme — —
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_01250 FecCD-family transporter protein 0.40 CCNA_02704 NADP-dependent malic enzyme low > 67
Azospirillum sp. SherDot2 0.18 MPMX19_05168 Hemin transport system permease protein HmuU 0.43 MPMX19_03121 NADP-dependent malic enzyme low > 112
Sphingomonas koreensis DSMZ 15582 0.17 Ga0059261_0623 ABC-type Fe3+-siderophore transport system, permease component 0.39 Ga0059261_3786 Malic enzyme low > 68
Azospirillum brasilense Sp245 0.17 AZOBR_RS29435 hemin ABC transporter permease 0.41 AZOBR_RS01140 NADP-dependent malic enzyme low > 97
Rhodospirillum rubrum S1H 0.17 Rru_A1137 transport system permease protein (NCBI) 0.42 Rru_A3542 malate dehydrogenase (NCBI) low > 58
Variovorax sp. SCN45 0.16 GFF446 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) 0.41 GFF3248 NADP-dependent malic enzyme (EC 1.1.1.40) low > 127
Paraburkholderia graminis OAS925 0.15 ABIE53_001247 iron complex transport system permease protein 0.43 ABIE53_000015 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) low > 113
Variovorax sp. OAS795 0.15 ABID97_RS17405 iron ABC transporter permease 0.40 ABID97_RS22340 NADP-dependent malic enzyme — —
Brevundimonas sp. GW460-12-10-14-LB2 0.12 A4249_RS05460 iron ABC transporter permease 0.39 A4249_RS13295 NADP-dependent malic enzyme — —
Acinetobacter radioresistens SK82 0.10 MPMX26_01196 Petrobactin import system permease protein YclO 0.41 MPMX26_01000 NADP-dependent malic enzyme — —

Not shown: 14 genomes with orthologs for BT2099 only; 29 genomes with orthologs for BT1969 only