Conservation of cofitness between b0157 and b3871 in Escherichia coli BW25113

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0157 yadS conserved inner membrane protein (NCBI) 1.0 b3871 bipA GTP-binding protein (NCBI) 0.33 2
Escherichia fergusonii Becca 1.00 EFB2_03887 hypothetical protein 1.00 EFB2_04745 GTP-binding protein TypA/BipA low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS00875 TRIC cation channel family protein 1.00 ECOLIN_RS22315 ribosome-dependent GTPase TypA low > 52
Escherichia coli ECOR38 1.00 HEPCGN_08225 yadS UPF0126 inner membrane protein YadS 1.00 HEPCGN_12720 typA ribosome-dependent GTPase TypA low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03505 hypothetical protein 1.00 OHPLBJKB_04181 GTP-binding protein TypA/BipA low > 73
Escherichia coli BL21 1.00 ECD_00156 UPF0126 family inner membrane protein 1.00 ECD_03756 GTP-binding protein low > 60
Escherichia coli ECRC99 1.00 KEDOAH_17880 yadS UPF0126 inner membrane protein YadS 1.00 KEDOAH_14060 typA ribosome-dependent GTPase TypA — —
Escherichia coli ECRC62 1.00 BNILDI_09050 yadS UPF0126 inner membrane protein YadS 1.00 BNILDI_05310 typA ribosome-dependent GTPase TypA — —
Escherichia coli ECOR27 1.00 NOLOHH_02620 yadS UPF0126 inner membrane protein YadS 1.00 NOLOHH_06220 typA ribosome-dependent GTPase TypA low > 57
Escherichia coli ECRC98 1.00 JDDGAC_13870 yadS UPF0126 inner membrane protein YadS 1.00 JDDGAC_17715 typA ribosome-dependent GTPase TypA — —
Escherichia coli ECRC102 1.00 NIAGMN_08125 yadS UPF0126 inner membrane protein YadS 1.00 NIAGMN_11845 typA ribosome-dependent GTPase TypA — —
Escherichia coli ECRC101 1.00 OKFHMN_10275 yadS UPF0126 inner membrane protein YadS 1.00 OKFHMN_14090 typA ribosome-dependent GTPase TypA — —
Escherichia coli ECRC101 1.00 MCAODC_00790 yadS UPF0126 inner membrane protein YadS 1.00 MCAODC_04590 typA ribosome-dependent GTPase TypA — —
Enterobacter asburiae PDN3 0.92 EX28DRAFT_3746 Predicted membrane protein 0.95 EX28DRAFT_4353 GTP-binding protein TypA/BipA — —
Enterobacter sp. TBS_079 0.92 MPMX20_00843 hypothetical protein 0.96 MPMX20_04594 GTP-binding protein TypA/BipA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF64 Putative inner membrane protein 0.97 GFF2223 GTP-binding protein TypA/BipA low > 78
Klebsiella michiganensis M5al 0.89 BWI76_RS05160 hypothetical protein 0.95 BWI76_RS00410 translational GTPase TypA — —
Serratia liquefaciens MT49 0.81 IAI46_03565 TRIC cation channel family protein 0.93 IAI46_24945 ribosome-dependent GTPase TypA low > 86
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_12060 hypothetical protein 0.78 CSW01_13840 translational GTPase TypA low > 62
Shewanella loihica PV-4 0.55 Shew_1024 hypothetical protein (RefSeq) 0.80 Shew_3553 GTP-binding protein TypA (RefSeq) low > 60
Shewanella sp. ANA-3 0.54 Shewana3_3055 hypothetical protein (RefSeq) 0.78 Shewana3_0301 GTP-binding protein TypA (RefSeq) low > 73
Shewanella oneidensis MR-1 0.54 SO1319 putative transporter, required for glycine utilization (from data) 0.78 SO4408 bipA virulence regulator BipA (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.54 Sama_0852 hypothetical protein (RefSeq) 0.79 Sama_3415 virulence regulator BipA (RefSeq) low > 62
Pseudomonas sp. S08-1 0.42 OH686_01605 UPF0126 inner membrane protein YadS 0.74 OH686_10610 GTP-binding protein TypA/BipA low > 80
Alteromonas macleodii MIT1002 0.41 MIT1002_04042 putative membrane protein 0.77 MIT1002_03181 hypothetical protein low > 70
Bacteroides ovatus ATCC 8483 0.33 BACOVA_03975 hypothetical protein 0.51 BACOVA_01078 GTP-binding protein TypA low > 94
Bacteroides thetaiotaomicron VPI-5482 0.32 BT1201 conserved hypothetical protein (NCBI ptt file) 0.51 BT2787 GTP-binding elongation factor family protein TypA/BipA (NCBI ptt file) low > 81
Rhodospirillum rubrum S1H 0.32 Rru_A0991 Protein of unknown function UPF0126 (NCBI) 0.50 Rru_A0148 GTP-binding protein TypA (NCBI) low > 58
Bacteroides stercoris CC31F 0.31 HMPREF1181_RS16955 trimeric intracellular cation channel family protein 0.51 HMPREF1181_RS01180 translational GTPase TypA low > 56
Phocaeicola dorei CL03T12C01 0.30 ABI39_RS17455 trimeric intracellular cation channel family protein 0.50 ABI39_RS06695 translational GTPase TypA low > 72
Phocaeicola vulgatus CL09T03C04 0.30 HMPREF1058_RS03765 trimeric intracellular cation channel family protein 0.50 HMPREF1058_RS10055 translational GTPase TypA low > 67
Desulfovibrio vulgaris Hildenborough JW710 0.29 DVU2672 glycine transporter (from data) 0.49 DVU2231 typA GTP-binding protein TypA (TIGR) low > 55
Sinorhizobium meliloti 1021 0.28 SMc00330 transmembrane protein 0.53 SMc03242 GTP-binding protein low > 103
Rhizobium sp. OAE497 0.28 ABIE40_RS00395 trimeric intracellular cation channel family protein 0.54 ABIE40_RS18125 translational GTPase TypA low > 107
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_03794 hypothetical protein 0.49 CCNA_00778 GTP-binding protein TypA/BipA low > 67
Caulobacter crescentus NA1000 0.27 CCNA_03794 hypothetical protein 0.49 CCNA_00778 GTP-binding protein TypA/BipA low > 66
Parabacteroides merdae CL09T00C40 0.26 HMPREF1078_RS08780 trimeric intracellular cation channel family protein 0.49 HMPREF1078_RS17580 translational GTPase TypA low > 61
Phaeobacter inhibens DSM 17395 0.26 PGA1_c00920 putative transporter, required for glycine utilization (from data) 0.51 PGA1_c15300 GTP-binding protein TypA low > 62
Brevundimonas sp. GW460-12-10-14-LB2 0.22 A4249_RS11875 trimeric intracellular cation channel family protein 0.49 A4249_RS13585 translational GTPase TypA — —
Sphingomonas koreensis DSMZ 15582 0.20 Ga0059261_1348 Predicted membrane protein 0.55 Ga0059261_0817 GTP-binding protein TypA/BipA low > 68

Not shown: 2 genomes with orthologs for b0157 only; 61 genomes with orthologs for b3871 only