Conservation of cofitness between b2945 and b2616 in Escherichia coli BW25113

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2945 endA DNA-specific endonuclease I (NCBI) 1.0 b2616 recN recombination and repair protein (NCBI) 0.48 9
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00773 Endonuclease-1 1.00 OHPLBJKB_01091 DNA repair protein RecN low > 73
Escherichia coli ECOR27 1.00 NOLOHH_11155 endA deoxyribonuclease I 1.00 NOLOHH_12815 recN DNA repair protein RecN low > 57
Escherichia coli ECRC62 1.00 BNILDI_09735 endA deoxyribonuclease I 1.00 BNILDI_11620 recN DNA repair protein RecN — —
Escherichia coli BL21 1.00 ECD_02775 DNA-specific endonuclease I 1.00 ECD_02504 recombination and repair protein low > 60
Escherichia coli ECOR38 1.00 HEPCGN_18590 endA deoxyribonuclease I 0.99 HEPCGN_20265 recN DNA repair protein RecN low > 85
Escherichia coli ECRC102 0.99 NIAGMN_17050 endA deoxyribonuclease I 0.99 NIAGMN_18915 recN DNA repair protein RecN — —
Escherichia coli ECRC98 0.99 JDDGAC_22915 endA deoxyribonuclease I 0.99 JDDGAC_24810 recN DNA repair protein RecN — —
Escherichia coli ECRC101 0.99 MCAODC_09805 endA deoxyribonuclease I 0.99 MCAODC_11670 recN DNA repair protein RecN — —
Escherichia coli ECRC101 0.99 OKFHMN_19285 endA deoxyribonuclease I 0.99 OKFHMN_21145 recN DNA repair protein RecN — —
Escherichia fergusonii Becca 0.99 EFB2_00957 Endonuclease-1 0.99 EFB2_01277 DNA repair protein RecN low > 86
Escherichia coli ECRC99 0.99 KEDOAH_08855 endA deoxyribonuclease I 0.99 KEDOAH_07075 recN DNA repair protein RecN — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS16385 deoxyribonuclease I 0.99 ECOLIN_RS14775 DNA repair protein RecN low > 52
Enterobacter asburiae PDN3 0.88 EX28DRAFT_2983 Endonuclease I 0.86 EX28DRAFT_2719 DNA repair protein RecN low > 76
Enterobacter sp. TBS_079 0.88 MPMX20_03803 Endonuclease-1 0.85 MPMX20_03486 DNA repair protein RecN low > 85
Klebsiella michiganensis M5al 0.86 BWI76_RS24065 deoxyribonuclease I 0.84 BWI76_RS21560 DNA repair protein RecN 0.23 31
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF3047 Endonuclease I precursor (EC 3.1.21.1) @ Extracellular deoxyribonuclease Dns (EC 3.1.21.-) 0.92 GFF4162 DNA repair protein RecN low > 78
Dickeya dianthicola ME23 0.79 DZA65_RS19620 deoxyribonuclease I 0.72 DZA65_RS04235 DNA repair protein RecN low > 75
Dickeya dadantii 3937 0.79 DDA3937_RS18550 deoxyribonuclease I 0.73 DDA3937_RS04325 DNA repair protein RecN low > 74
Dickeya dianthicola 67-19 0.78 HGI48_RS18485 deoxyribonuclease I 0.72 HGI48_RS04320 DNA repair protein RecN low > 71
Rahnella sp. WP5 0.76 EX31_RS02655 deoxyribonuclease I 0.75 EX31_RS21760 DNA repair protein RecN low > 89
Pectobacterium carotovorum WPP14 0.76 HER17_RS02645 deoxyribonuclease I 0.72 HER17_RS17420 DNA repair protein RecN low > 75
Pantoea sp. MT58 0.75 IAI47_03625 deoxyribonuclease I 0.77 IAI47_04810 DNA repair protein RecN low > 76
Serratia liquefaciens MT49 0.73 IAI46_21380 deoxyribonuclease I 0.77 IAI46_19635 DNA repair protein RecN low > 86
Vibrio cholerae E7946 ATCC 55056 0.63 CSW01_02500 deoxyribonuclease 0.53 CSW01_04395 DNA repair protein RecN low > 62
Shewanella loihica PV-4 0.56 Shew_3223 deoxyribonuclease I (RefSeq) 0.53 Shew_1196 recombination and repair protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.55 Shewana3_3443 endonuclease I (RefSeq) 0.55 Shewana3_1104 recombination and repair protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.55 SO0833 endA endonuclease I (NCBI ptt file) 0.55 SO3462 recN DNA repair protein RecN (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.54 Sama_0576 deoxyribonuclease I (RefSeq) 0.54 Sama_1026 recombination and repair protein (RefSeq) low > 62
Pseudomonas simiae WCS417 0.48 PS417_18420 deoxyribonuclease 0.39 PS417_24070 recombination and repair protein low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_2148 Deoxyribonuclease I 0.38 Psyr_4197 DNA replication and repair protein RecN low > 86
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_2148 Deoxyribonuclease I 0.38 Psyr_4197 DNA replication and repair protein RecN low > 86
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS20395 deoxyribonuclease 0.38 PFLU_RS25910 DNA repair protein RecN low > 109
Pseudomonas fluorescens SBW25 0.47 PFLU_RS20395 deoxyribonuclease 0.38 PFLU_RS25910 DNA repair protein RecN low > 109
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_3916 Endonuclease I precursor (EC 3.1.21.1) 0.40 PfGW456L13_5106 DNA repair protein RecN 0.33 28
Pseudomonas stutzeri RCH2 0.47 Psest_1274 Endonuclease I 0.38 Psest_0962 DNA repair protein RecN low > 67
Pseudomonas sp. RS175 0.46 PFR28_02739 Extracellular deoxyribonuclease 0.39 PFR28_00071 DNA repair protein RecN low > 88
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_20795 deoxyribonuclease 0.38 AO353_05660 DNA repair protein RecN 0.25 34
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_6039 Endonuclease I precursor (EC 3.1.21.1) 0.39 Pf1N1B4_1178 DNA repair protein RecN low > 87
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_00985 deoxyribonuclease 0.38 AO356_07510 DNA repair protein RecN 0.79 1
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_158 Endonuclease I precursor (EC 3.1.21.1) 0.39 Pf6N2E2_3370 DNA repair protein RecN 0.34 4
Pseudomonas sp. S08-1 0.45 OH686_20125 Endonuclease I precursor 0.39 OH686_17050 DNA repair protein RecN low > 80

Not shown: 0 genomes with orthologs for b2945 only; 58 genomes with orthologs for b2616 only