Conservation of cofitness between b2616 and b2945 in Escherichia coli BW25113

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2616 recN recombination and repair protein (NCBI) 1.0 b2945 endA DNA-specific endonuclease I (NCBI) 0.48 11
Escherichia coli ECRC62 1.00 BNILDI_11620 recN DNA repair protein RecN 1.00 BNILDI_09735 endA deoxyribonuclease I — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01091 DNA repair protein RecN 1.00 OHPLBJKB_00773 Endonuclease-1 low > 73
Escherichia coli ECOR27 1.00 NOLOHH_12815 recN DNA repair protein RecN 1.00 NOLOHH_11155 endA deoxyribonuclease I low > 57
Escherichia coli BL21 1.00 ECD_02504 recombination and repair protein 1.00 ECD_02775 DNA-specific endonuclease I low > 60
Escherichia coli ECRC101 0.99 OKFHMN_21145 recN DNA repair protein RecN 0.99 OKFHMN_19285 endA deoxyribonuclease I — —
Escherichia coli ECRC101 0.99 MCAODC_11670 recN DNA repair protein RecN 0.99 MCAODC_09805 endA deoxyribonuclease I — —
Escherichia coli ECRC99 0.99 KEDOAH_07075 recN DNA repair protein RecN 0.99 KEDOAH_08855 endA deoxyribonuclease I — —
Escherichia coli ECRC102 0.99 NIAGMN_18915 recN DNA repair protein RecN 0.99 NIAGMN_17050 endA deoxyribonuclease I — —
Escherichia fergusonii Becca 0.99 EFB2_01277 DNA repair protein RecN 0.99 EFB2_00957 Endonuclease-1 low > 86
Escherichia coli ECRC98 0.99 JDDGAC_24810 recN DNA repair protein RecN 0.99 JDDGAC_22915 endA deoxyribonuclease I — —
Escherichia coli ECOR38 0.99 HEPCGN_20265 recN DNA repair protein RecN 1.00 HEPCGN_18590 endA deoxyribonuclease I low > 85
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14775 DNA repair protein RecN 0.99 ECOLIN_RS16385 deoxyribonuclease I low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF4162 DNA repair protein RecN 0.85 GFF3047 Endonuclease I precursor (EC 3.1.21.1) @ Extracellular deoxyribonuclease Dns (EC 3.1.21.-) low > 78
Enterobacter asburiae PDN3 0.86 EX28DRAFT_2719 DNA repair protein RecN 0.88 EX28DRAFT_2983 Endonuclease I low > 76
Enterobacter sp. TBS_079 0.85 MPMX20_03486 DNA repair protein RecN 0.88 MPMX20_03803 Endonuclease-1 low > 85
Klebsiella michiganensis M5al 0.84 BWI76_RS21560 DNA repair protein RecN 0.86 BWI76_RS24065 deoxyribonuclease I low > 92
Serratia liquefaciens MT49 0.77 IAI46_19635 DNA repair protein RecN 0.73 IAI46_21380 deoxyribonuclease I low > 86
Pantoea sp. MT58 0.77 IAI47_04810 DNA repair protein RecN 0.75 IAI47_03625 deoxyribonuclease I low > 76
Rahnella sp. WP5 0.75 EX31_RS21760 DNA repair protein RecN 0.76 EX31_RS02655 deoxyribonuclease I low > 89
Dickeya dadantii 3937 0.73 DDA3937_RS04325 DNA repair protein RecN 0.79 DDA3937_RS18550 deoxyribonuclease I low > 74
Dickeya dianthicola 67-19 0.72 HGI48_RS04320 DNA repair protein RecN 0.78 HGI48_RS18485 deoxyribonuclease I low > 71
Dickeya dianthicola ME23 0.72 DZA65_RS04235 DNA repair protein RecN 0.79 DZA65_RS19620 deoxyribonuclease I low > 75
Pectobacterium carotovorum WPP14 0.72 HER17_RS17420 DNA repair protein RecN 0.76 HER17_RS02645 deoxyribonuclease I low > 75
Shewanella oneidensis MR-1 0.55 SO3462 recN DNA repair protein RecN (NCBI ptt file) 0.55 SO0833 endA endonuclease I (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.55 Shewana3_1104 recombination and repair protein (RefSeq) 0.55 Shewana3_3443 endonuclease I (RefSeq) low > 73
Shewanella amazonensis SB2B 0.54 Sama_1026 recombination and repair protein (RefSeq) 0.54 Sama_0576 deoxyribonuclease I (RefSeq) low > 62
Shewanella loihica PV-4 0.53 Shew_1196 recombination and repair protein (RefSeq) 0.56 Shew_3223 deoxyribonuclease I (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.53 CSW01_04395 DNA repair protein RecN 0.63 CSW01_02500 deoxyribonuclease low > 62
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_5106 DNA repair protein RecN 0.47 PfGW456L13_3916 Endonuclease I precursor (EC 3.1.21.1) 0.33 36
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_1178 DNA repair protein RecN 0.46 Pf1N1B4_6039 Endonuclease I precursor (EC 3.1.21.1) 0.29 16
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_3370 DNA repair protein RecN 0.46 Pf6N2E2_158 Endonuclease I precursor (EC 3.1.21.1) 0.34 25
Pseudomonas sp. S08-1 0.39 OH686_17050 DNA repair protein RecN 0.45 OH686_20125 Endonuclease I precursor low > 80
Pseudomonas simiae WCS417 0.39 PS417_24070 recombination and repair protein 0.48 PS417_18420 deoxyribonuclease low > 88
Pseudomonas sp. RS175 0.39 PFR28_00071 DNA repair protein RecN 0.46 PFR28_02739 Extracellular deoxyribonuclease low > 88
Pseudomonas fluorescens SBW25 0.38 PFLU_RS25910 DNA repair protein RecN 0.47 PFLU_RS20395 deoxyribonuclease low > 109
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_07510 DNA repair protein RecN 0.46 AO356_00985 deoxyribonuclease 0.79 4
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS25910 DNA repair protein RecN 0.47 PFLU_RS20395 deoxyribonuclease low > 109
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_05660 DNA repair protein RecN 0.46 AO353_20795 deoxyribonuclease low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_4197 DNA replication and repair protein RecN 0.48 Psyr_2148 Deoxyribonuclease I low > 86
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_4197 DNA replication and repair protein RecN 0.48 Psyr_2148 Deoxyribonuclease I low > 86
Pseudomonas stutzeri RCH2 0.38 Psest_0962 DNA repair protein RecN 0.47 Psest_1274 Endonuclease I low > 67

Not shown: 58 genomes with orthologs for b2616 only; 0 genomes with orthologs for b2945 only