Conservation of cofitness between b1595 and b2239 in Escherichia coli BW25113

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1595 ynfL predicted DNA-binding transcriptional regulator (NCBI) 1.0 b2239 glpQ periplasmic glycerophosphodiester phosphodiesterase (NCBI) 0.17 20
Escherichia coli BL21 1.00 ECD_01564 LysR family putative transcriptional regulator 0.99 ECD_02165 periplasmic glycerophosphodiester phosphodiesterase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02131 Hca operon transcriptional activator HcaR 1.00 OHPLBJKB_01472 Glycerophosphodiester phosphodiesterase, periplasmic low > 73
Escherichia coli ECRC99 1.00 KEDOAH_00370 ynfL Uncharacterized HTH-type transcriptional regulator YnfL 0.99 KEDOAH_05115 glpQ glycerophosphodiester phosphodiesterase — —
Escherichia coli ECOR27 1.00 NOLOHH_18240 ynfL Uncharacterized HTH-type transcriptional regulator YnfL 0.99 NOLOHH_14675 glpQ glycerophosphodiester phosphodiesterase — —
Escherichia coli ECRC101 1.00 OKFHMN_27735 ynfL Uncharacterized HTH-type transcriptional regulator YnfL 0.99 OKFHMN_23070 glpQ glycerophosphodiester phosphodiesterase — —
Escherichia coli ECRC101 1.00 MCAODC_17675 ynfL Uncharacterized HTH-type transcriptional regulator YnfL 0.99 MCAODC_14120 glpQ glycerophosphodiester phosphodiesterase — —
Escherichia coli ECOR38 1.00 HEPCGN_06110 ynfL Uncharacterized HTH-type transcriptional regulator YnfL 0.99 HEPCGN_22315 glpQ glycerophosphodiester phosphodiesterase low > 85
Escherichia coli ECRC62 1.00 BNILDI_17030 ynfL Uncharacterized HTH-type transcriptional regulator YnfL 0.99 BNILDI_13590 glpQ glycerophosphodiester phosphodiesterase — —
Escherichia coli ECRC102 1.00 NIAGMN_00340 ynfL Uncharacterized HTH-type transcriptional regulator YnfL 0.99 NIAGMN_20835 glpQ glycerophosphodiester phosphodiesterase — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS08910 LysR family transcriptional regulator 0.99 ECOLIN_RS13055 glycerophosphodiester phosphodiesterase — —
Escherichia fergusonii Becca 0.99 EFB2_02397 Hca operon transcriptional activator HcaR 0.99 EFB2_01618 Glycerophosphodiester phosphodiesterase, periplasmic low > 86
Enterobacter asburiae PDN3 0.84 EX28DRAFT_1494 Transcriptional regulator 0.83 EX28DRAFT_0351 Glycerophosphoryl diester phosphodiesterase low > 76
Enterobacter sp. TBS_079 0.83 MPMX20_02062 Hca operon transcriptional activator HcaR 0.82 MPMX20_03184 Glycerophosphodiester phosphodiesterase, periplasmic low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF1786 LysR family transcriptional regulator YnfL 0.89 GFF1843 Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) low > 78
Klebsiella michiganensis M5al 0.74 BWI76_RS15960 LysR family transcriptional regulator 0.81 BWI76_RS19955 glycerophosphoryl diester phosphodiesterase low > 92
Pectobacterium carotovorum WPP14 0.60 HER17_RS10740 LysR family transcriptional regulator 0.73 HER17_RS01420 glycerophosphodiester phosphodiesterase low > 75
Dickeya dadantii 3937 0.60 DDA3937_RS10670 LysR family transcriptional regulator 0.72 DDA3937_RS19820 glycerophosphodiester phosphodiesterase low > 74
Serratia liquefaciens MT49 0.58 IAI46_11680 LysR family transcriptional regulator 0.78 IAI46_00795 glycerophosphodiester phosphodiesterase low > 86
Pseudomonas stutzeri RCH2 0.49 Psest_3707 Transcriptional regulator 0.24 Psest_0228 Glycerophosphoryl diester phosphodiesterase low > 67
Pseudomonas sp. RS175 0.48 PFR28_05019 HTH-type transcriptional regulator BenM 0.12 PFR28_03303 Glycerophosphodiester phosphodiesterase low > 88
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_1530 LysR family transcriptional regulator YnfL 0.12 Pf1N1B4_3409 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_0421 transcriptional regulator, LysR family 0.12 Psyr_3242 Glycerophosphodiester phosphodiesterase low > 86
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_0421 transcriptional regulator, LysR family 0.12 Psyr_3242 Glycerophosphodiester phosphodiesterase low > 86
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_255 LysR family transcriptional regulator YnfL 0.12 PfGW456L13_1944 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) low > 87
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_09290 LysR family transcriptional regulator 0.12 AO356_18560 glycerophosphodiester phosphodiesterase low > 104
Ralstonia solanacearum GMI1000 0.39 RS_RS23670 LysR family transcriptional regulator 0.17 RS_RS02495 glycerophosphoryl diester phosphodiesterase — —
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS18015 LysR family transcriptional regulator 0.20 LRK54_RS10435 glycerophosphodiester phosphodiesterase low > 59
Rhodanobacter denitrificans MT42 0.36 LRK55_RS17870 LysR family transcriptional regulator 0.20 LRK55_RS10075 glycerophosphodiester phosphodiesterase low > 63
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.386.1 LysR family transcriptional regulator STM3121 0.20 Xcc-8004.5399.1 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) low > 74
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS21255 LysR family transcriptional regulator 0.19 RR42_RS02710 glycerophosphodiester phosphodiesterase low > 128
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_07285 lysR LysR family transcriptional regulator 0.20 OKGIIK_13490 ugpQ Glycerophosphoryl diester phosphodiesterase low > 52
Variovorax sp. SCN45 0.32 GFF286 Transcriptional regulator, LysR family 0.17 GFF1241 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) periplasmic (secreted in GramPositives) low > 127
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS05585 LysR substrate-binding domain-containing protein 0.18 ABZR86_RS16105 glycerophosphodiester phosphodiesterase low > 74
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS12870 LysR family transcriptional regulator 0.19 ABZR87_RS07630 glycerophosphodiester phosphodiesterase low > 80
Ralstonia solanacearum UW163 0.28 UW163_RS09140 LysR family transcriptional regulator 0.17 UW163_RS01910 glycerophosphoryl diester phosphodiesterase — —
Ralstonia solanacearum IBSBF1503 0.28 RALBFv3_RS04530 LysR family transcriptional regulator 0.17 RALBFv3_RS11675 glycerophosphoryl diester phosphodiesterase low > 76
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_03140 LysR-family transcriptional regulator 0.23 CCNA_03381 glycerophosphoryl diester phosphodiesterase low > 67
Caulobacter crescentus NA1000 0.27 CCNA_03140 LysR-family transcriptional regulator 0.23 CCNA_03381 glycerophosphoryl diester phosphodiesterase low > 66
Azospirillum sp. SherDot2 0.25 MPMX19_03900 Hca operon transcriptional activator HcaR 0.08 MPMX19_05893 hypothetical protein low > 112
Vibrio cholerae E7946 ATCC 55056 0.23 CSW01_07965 LysR family transcriptional regulator 0.58 CSW01_14695 glycerophosphodiester phosphodiesterase low > 62

Not shown: 32 genomes with orthologs for b1595 only; 7 genomes with orthologs for b2239 only