Conservation of cofitness between b3355 and b0523 in Escherichia coli BW25113

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3355 prkB predicted phosphoribulokinase (NCBI) 1.0 b0523 purE phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI) 0.33 19
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00347 Phosphoribulokinase, plasmid 1.00 OHPLBJKB_03158 N5-carboxyaminoimidazole ribonucleotide mutase low > 73
Escherichia coli BL21 1.00 ECD_03206 putative phosphoribulokinase 1.00 ECD_00473 N5-carboxyaminoimidazole ribonucleotide mutase low > 60
Escherichia coli ECOR38 1.00 HEPCGN_16075 prkB phosphoribulokinase 1.00 HEPCGN_06475 purE N5-carboxyaminoimidazole ribonucleotide mutase low > 85
Escherichia fergusonii Becca 1.00 EFB2_00467 Phosphoribulokinase, plasmid 0.99 EFB2_03539 N5-carboxyaminoimidazole ribonucleotide mutase low > 86
Escherichia coli ECRC62 1.00 BNILDI_02470 prkB phosphoribulokinase 1.00 BNILDI_22255 purE N5-carboxyaminoimidazole ribonucleotide mutase
Escherichia coli ECRC98 1.00 JDDGAC_20880 prkB phosphoribulokinase 1.00 JDDGAC_11485 purE N5-carboxyaminoimidazole ribonucleotide mutase
Escherichia coli ECOR27 1.00 NOLOHH_09050 prkB phosphoribulokinase 1.00 NOLOHH_00825 purE N5-carboxyaminoimidazole ribonucleotide mutase low > 57
Escherichia coli Nissle 1917 1.00 ECOLIN_RS19215 phosphoribulokinase 0.99 ECOLIN_RS03030 5-(carboxyamino)imidazole ribonucleotide mutase
Escherichia coli ECRC101 1.00 MCAODC_07780 prkB phosphoribulokinase 1.00 MCAODC_27055 purE N5-carboxyaminoimidazole ribonucleotide mutase
Escherichia coli ECRC101 1.00 OKFHMN_17250 prkB phosphoribulokinase 1.00 OKFHMN_07835 purE N5-carboxyaminoimidazole ribonucleotide mutase
Escherichia coli ECRC102 1.00 NIAGMN_15020 prkB phosphoribulokinase 1.00 NIAGMN_05890 purE N5-carboxyaminoimidazole ribonucleotide mutase
Escherichia coli ECRC99 1.00 KEDOAH_10890 prkB phosphoribulokinase 1.00 KEDOAH_20135 purE N5-carboxyaminoimidazole ribonucleotide mutase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.98 GFF3714 Phosphoribulokinase (EC 2.7.1.19) homolog, function unknown 0.85 GFF4439 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) low > 78
Klebsiella michiganensis M5al 0.96 BWI76_RS25975 phosphoribulokinase 0.79 BWI76_RS07070 5-(carboxyamino)imidazole ribonucleotide mutase low > 92
Enterobacter asburiae PDN3 0.94 EX28DRAFT_4174 Phosphoribulokinase 0.85 EX28DRAFT_2459 phosphoribosylaminoimidazole carboxylase, PurE protein
Enterobacter sp. TBS_079 0.94 MPMX20_04258 Phosphoribulokinase, plasmid 0.85 MPMX20_01098 N5-carboxyaminoimidazole ribonucleotide mutase 0.35 48
Pantoea sp. MT58 0.91 IAI47_01975 phosphoribulokinase 0.71 IAI47_14350 5-(carboxyamino)imidazole ribonucleotide mutase 0.45 58
Serratia liquefaciens MT49 0.90 IAI46_23570 phosphoribulokinase 0.70 IAI46_05375 5-(carboxyamino)imidazole ribonucleotide mutase low > 86
Erwinia tracheiphila SCR3 0.90 LU632_RS22790 phosphoribulokinase 0.72 LU632_RS15245 purE 5-(carboxyamino)imidazole ribonucleotide mutase low > 74
Pectobacterium carotovorum WPP14 0.89 HER17_RS01925 phosphoribulokinase 0.71 HER17_RS06475 5-(carboxyamino)imidazole ribonucleotide mutase low > 75
Rahnella sp. WP5 0.88 EX31_RS04610 phosphoribulokinase 0.70 EX31_RS22625 5-(carboxyamino)imidazole ribonucleotide mutase low > 89
Dickeya dianthicola 67-19 0.88 HGI48_RS19555 phosphoribulokinase 0.71 HGI48_RS15185 5-(carboxyamino)imidazole ribonucleotide mutase low > 71
Dickeya dadantii 3937 0.87 DDA3937_RS19435 phosphoribulokinase 0.72 DDA3937_RS15105 5-(carboxyamino)imidazole ribonucleotide mutase
Dickeya dianthicola ME23 0.87 DZA65_RS20640 phosphoribulokinase 0.72 DZA65_RS15990 5-(carboxyamino)imidazole ribonucleotide mutase low > 75
Vibrio cholerae E7946 ATCC 55056 0.75 CSW01_13225 phosphoribulokinase 0.53 CSW01_00265 5-(carboxyamino)imidazole ribonucleotide mutase low > 62
Shewanella amazonensis SB2B 0.72 Sama_3002 phosphoribulokinase (RefSeq) 0.66 Sama_1064 phosphoribosylaminoimidazole carboxylase (RefSeq) low > 62
Shewanella loihica PV-4 0.71 Shew_0587 phosphoribulokinase (RefSeq) 0.55 Shew_1248 phosphoribosylaminoimidazole carboxylase, catalytic subunit (RefSeq)
Shewanella oneidensis MR-1 0.70 SO0878 prkB phosphoribulokinase (NCBI ptt file) 0.59 SO3554 purE phosphoribosylaminoimidazole carboxylase, catalytic subunit (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.70 Shewana3_3400 phosphoribulokinase/uridine kinase (RefSeq) 0.60 Shewana3_3155 phosphoribosylaminoimidazole carboxylase, catalytic subunit (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.68 MIT1002_03965 Phosphoribulokinase, plasmid 0.44 MIT1002_00521 N5-carboxyaminoimidazole ribonucleotide mutase low > 70
Hydrogenophaga sp. GW460-11-11-14-LB1 0.62 GFF2199 Phosphoribulokinase (EC 2.7.1.19) 0.40 GFF2771 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Variovorax sp. OAS795 0.61 ABID97_RS12880 phosphoribulokinase 0.42 ABID97_RS01705 5-(carboxyamino)imidazole ribonucleotide mutase
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS32780 phosphoribulokinase 0.39 QEN71_RS02445 5-(carboxyamino)imidazole ribonucleotide mutase
Rhodospirillum rubrum S1H 0.59 Rru_A2404 Phosphoribulokinase (NCBI) 0.49 Rru_A1050 Phosphoribosylaminoimidazole carboxylase (NCBI)
Rhodopseudomonas palustris CGA009 0.57 TX73_024115 phosphoribulokinase 0.52 TX73_021640 5-(carboxyamino)imidazole ribonucleotide mutase
Azospirillum sp. SherDot2 0.56 MPMX19_02943 Phosphoribulokinase, chromosomal 0.54 MPMX19_01417 N5-carboxyaminoimidazole ribonucleotide mutase
Dechlorosoma suillum PS 0.56 Dsui_1562 phosphoribulokinase 0.45 Dsui_0092 phosphoribosylaminoimidazole carboxylase, PurE protein
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_01313 phosphoribulokinase 0.39 H281DRAFT_04186 5-(carboxyamino)imidazole ribonucleotide mutase
Magnetospirillum magneticum AMB-1 0.56 AMB_RS13555 phosphoribulokinase 0.55 AMB_RS11145 5-(carboxyamino)imidazole ribonucleotide mutase
Paraburkholderia graminis OAS925 0.55 ABIE53_005500 phosphoribulokinase 0.39 ABIE53_003424 5-(carboxyamino)imidazole ribonucleotide mutase
Marinobacter adhaerens HP15 0.54 HP15_3311 phosphoribulokinase 0.60 HP15_2349 phosphoribosylaminoimidazole carboxylase catalytic subunit
Sinorhizobium meliloti 1021 0.53 SM_b20201 phosphoribulokinase 0.54 SMc04001 phosphoribosylaminoimidazole carboxylase catalytic subunit protein low > 103

Not shown: 0 genomes with orthologs for b3355 only; 59 genomes with orthologs for b0523 only