Homologs of Pf6N2E2_3412 from Pseudomonas fluorescens FW300-N2E2

FIG006045: Sigma factor, ECF subfamily
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3412 FIG006045: Sigma factor, ECF subfamily insig. 100 100
o Pseudomonas fluorescens FW300-N2C3 AO356_07625 RNA polymerase subunit sigma insig. 96 93
o Pseudomonas sp. RS175 PFR28_00037 putative RNA polymerase sigma factor FecI insig. 93 93
o Pseudomonas putida KT2440 PP_0704 RNA polymerase sigma-70 factor, ECF subfamily strong 71 92
o Pseudomonas simiae WCS417 PS417_09655 RNA polymerase sigma factor insig. 72 93
  Cupriavidus basilensis FW507-4G11 RR42_RS28810 RNA polymerase sigma factor no data 56 92
  Pseudomonas fluorescens FW300-N2C3 AO356_16910 RNA polymerase subunit sigma insig. 56 82
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5307 FIG006045: Sigma factor, ECF subfamily strong 56 82
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2098 heme uptake regulator insig. 53 89
  Variovorax sp. SCN45 GFF5284 RNA polymerase ECF-type sigma factor insig. 52 88
  Pseudomonas fluorescens SBW25 PFLU_RS05170 sigma-70 family RNA polymerase sigma factor insig. 55 82
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05170 sigma-70 family RNA polymerase sigma factor strong 55 82
  Pseudomonas fluorescens FW300-N2C3 AO356_21710 RNA polymerase subunit sigma insig. 53 89
  Pseudomonas sp. RS175 PFR28_00232 putative RNA polymerase sigma factor FecI insig. 55 82
o Herbaspirillum seropedicae SmR1 HSERO_RS22395 RNA polymerase sigma factor insig. 58 83
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3565 heme uptake regulator insig. 52 89
  Pseudomonas simiae WCS417 PS417_05100 RNA polymerase sigma factor sig. 54 82
  Variovorax sp. SCN45 GFF5862 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 52 85
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1008 FIG006045: Sigma factor, ECF subfamily insig. 53 84
  Dechlorosoma suillum PS Dsui_2977 RNA polymerase sigma factor, sigma-70 family insig. 53 89
  Serratia liquefaciens MT49 IAI46_11745 sigma-70 family RNA polymerase sigma factor no data 50 83
  Dechlorosoma suillum PS Dsui_2948 RNA polymerase sigma factor, sigma-70 family insig. 57 83
  Pseudomonas simiae WCS417 PS417_00670 RNA polymerase sigma factor sig. 52 89
  Pseudomonas syringae pv. syringae B728a Psyr_1040 RNA polymerase sigma factor, ECF subfamily strong 52 82
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1040 RNA polymerase sigma factor, ECF subfamily insig. 52 82
  Pseudomonas putida KT2440 PP_4611 RNA polymerase sigma-70 factor, ECF subfamily sig. 51 82
  Pseudomonas sp. RS175 PFR28_04775 putative RNA polymerase sigma factor FecI insig. 52 98
  Escherichia coli ECOR38 HEPCGN_09830 fecI RNA polymerase sigma factor FecI cofit 50 85
  Pseudomonas putida KT2440 PP_3086 putative RNA polymerase sigma-70 factor insig. 56 81
  Escherichia coli BL21 ECD_04159 RNA polymerase sigma-19 factor, fec operon-specific; ECF sigma factor insig. 50 84
  Escherichia coli Nissle 1917 ECOLIN_RS25750 RNA polymerase sigma factor FecI insig. 50 84
  Escherichia coli BW25113 b4293 fecI KpLE2 phage-like element; RNA polymerase, sigma 19 factor (NCBI) strong 50 84
  Pseudomonas stutzeri RCH2 Psest_4339 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog strong 51 81
  Cupriavidus basilensis FW507-4G11 RR42_RS31145 RNA polymerase sigma factor insig. 48 92
  Pseudomonas fluorescens FW300-N2C3 AO356_10620 RNA polymerase subunit sigma insig. 56 84
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3991 RNA polymerase sigma-70 factor, ECF subfamily insig. 56 84
  Variovorax sp. SCN45 GFF723 RNA polymerase ECF-type sigma factor insig. 51 90
  Variovorax sp. SCN45 GFF1524 FIG006045: Sigma factor, ECF subfamily insig. 49 82
  Variovorax sp. SCN45 GFF2431 RNA polymerase ECF-type sigma factor insig. 47 89
  Pseudomonas syringae pv. syringae B728a Psyr_2580 Sigma-70 region 2 no data 49 89
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2580 Sigma-70 region 2 insig. 49 89
  Dickeya dadantii 3937 DDA3937_RS03525 sigma-70 family RNA polymerase sigma factor insig. 50 81
  Pseudomonas putida KT2440 PP_0162 RNA polymerase sigma-70 factor, ECF subfamily sig. 55 92
  Paraburkholderia sabiae LMG 24235 QEN71_RS15135 sigma-70 family RNA polymerase sigma factor insig. 50 82
  Pseudomonas syringae pv. syringae B728a Psyr_4731 Sigma-70 region 2:Sigma-70 region 4 insig. 46 92
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4731 Sigma-70 region 2:Sigma-70 region 4 insig. 46 92
  Pectobacterium carotovorum WPP14 HER17_RS17615 sigma-70 family RNA polymerase sigma factor insig. 46 81
  Pseudomonas fluorescens SBW25 PFLU_RS17395 sigma-70 family RNA polymerase sigma factor insig. 53 81
  Pseudomonas fluorescens SBW25-INTG PFLU_RS17395 sigma-70 family RNA polymerase sigma factor strong 53 81
  Pseudomonas putida KT2440 PP_0352 RNA polymerase sigma-70 factor, ECF subfamily sig. 49 88
  Pseudomonas fluorescens SBW25 PFLU_RS30180 sigma-70 family RNA polymerase sigma factor insig. 48 81
  Pseudomonas fluorescens SBW25-INTG PFLU_RS30180 sigma-70 family RNA polymerase sigma factor insig. 48 81
  Pseudomonas fluorescens FW300-N2C3 AO356_28820 RNA polymerase subunit sigma insig. 50 83
  Pseudomonas sp. RS175 PFR28_04114 putative RNA polymerase sigma factor FecI insig. 49 86
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1682 RNA polymerase sigma-70 factor, ECF subfamily insig. 49 83
  Pseudomonas fluorescens FW300-N2C3 AO356_26280 RNA polymerase subunit sigma insig. 53 81
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4818 RNA polymerase sigma-70 factor, ECF subfamily insig. 48 83
  Variovorax sp. SCN45 GFF4658 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 47 84
  Pseudomonas putida KT2440 PP_3577 RNA polymerase, sigma 19 factor insig. 47 84
  Pseudomonas simiae WCS417 PS417_28525 RNA polymerase sigma factor insig. 47 81
  Pseudomonas fluorescens SBW25 PFLU_RS13600 sigma-70 family RNA polymerase sigma factor insig. 50 83
  Pseudomonas fluorescens SBW25-INTG PFLU_RS13600 sigma-70 family RNA polymerase sigma factor insig. 50 83
  Variovorax sp. SCN45 GFF5858 heme uptake regulator insig. 49 85
  Pseudomonas simiae WCS417 PS417_12935 RNA polymerase sigma factor insig. 50 83
  Pseudomonas sp. RS175 PFR28_01871 putative RNA polymerase sigma factor FecI sig. 50 85
  Herbaspirillum seropedicae SmR1 HSERO_RS12165 RNA polymerase sigma factor insig. 49 85
  Klebsiella michiganensis M5al BWI76_RS11395 RNA polymerase sigma factor FecI strong 46 85
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_6050 RNA polymerase sigma-70 factor, ECF subfamily insig. 51 81
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2474 RNA polymerase sigma-70 factor, ECF subfamily insig. 49 85
  Pseudomonas fluorescens FW300-N2C3 AO356_14080 RNA polymerase subunit sigma insig. 48 86
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.715.1 RNA polymerase sigma factor insig. 48 81
  Pseudomonas simiae WCS417 PS417_26065 RNA polymerase sigma factor insig. 47 86
  Pseudomonas fluorescens SBW25 PFLU_RS27705 RNA polymerase sigma factor insig. 46 86
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27705 RNA polymerase sigma factor insig. 46 86
  Pseudomonas fluorescens SBW25 PFLU_RS18285 sigma-70 family RNA polymerase sigma factor insig. 44 88
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18285 sigma-70 family RNA polymerase sigma factor insig. 44 88
  Pseudomonas simiae WCS417 PS417_16255 RNA polymerase sigma factor sig. 44 88
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3357 RNA polymerase sigma-70 factor, ECF subfamily insig. 50 81
  Herbaspirillum seropedicae SmR1 HSERO_RS00175 RNA polymerase sigma factor insig. 54 82
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1135 RNA polymerase sigma-70 factor, ECF subfamily insig. 48 79
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4748 RNA polymerase sigma-70 factor, ECF subfamily insig. 48 79
  Pseudomonas putida KT2440 PP_0667 RNA polymerase sigma-70 factor, ECF subfamily insig. 46 83
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4581 RNA polymerase sigma-70 factor, ECF subfamily no data 48 81
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS19630 RNA polymerase sigma factor sig. 46 81
  Ralstonia solanacearum UW163 UW163_RS19545 RNA polymerase sigma factor insig. 46 81
  Pectobacterium carotovorum WPP14 HER17_RS21290 sigma-70 family RNA polymerase sigma factor insig. 45 82
  Ralstonia solanacearum PSI07 RPSI07_RS03580 RNA polymerase sigma factor insig. 46 81
  Pectobacterium carotovorum WPP14 HER17_RS18100 sigma-70 family RNA polymerase sigma factor cofit 44 90
  Rahnella sp. WP5 EX31_RS16485 sigma-70 family RNA polymerase sigma factor insig. 41 88
  Pseudomonas simiae WCS417 PS417_15890 RNA polymerase sigma factor sig. 48 81
  Ralstonia solanacearum GMI1000 RS_RS21190 RNA polymerase sigma factor cofit 45 81
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1131 RNA polymerase sigma-70 factor, ECF subfamily insig. 51 72
  Pectobacterium carotovorum WPP14 HER17_RS15360 sigma-70 family RNA polymerase sigma factor insig. 42 83
  Pseudomonas fluorescens SBW25 PFLU_RS17705 sigma-70 family RNA polymerase sigma factor insig. 48 81
  Pseudomonas fluorescens SBW25-INTG PFLU_RS17705 sigma-70 family RNA polymerase sigma factor sig. 48 81
  Dechlorosoma suillum PS Dsui_2165 RNA polymerase sigma factor, sigma-70 family no data 45 82
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_563 RNA polymerase sigma-70 factor insig. 41 83
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4253 RNA polymerase sigma-70 factor, ECF subfamily insig. 40 84
o Ralstonia sp. UNC404CL21Col ABZR87_RS12845 sigma-70 family RNA polymerase sigma factor strong 41 84
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1811 RNA polymerase sigma-70 factor, ECF subfamily insig. 57 53