Homologs of Pf6N2E2_2404 from Pseudomonas fluorescens FW300-N2E2

Sigma factor PvdS, controling pyoverdin biosynthesis
SEED: Sigma factor PvdS, controling pyoverdin biosynthesis
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
o Pseudomonas fluorescens FW300-N2C3 AO356_02895 RNA polymerase subunit sigma-70 strong 100 100
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2404 Sigma factor PvdS, controling pyoverdin biosynthesis sig. 100 100
o Pseudomonas sp. RS175 PFR28_01023 hypothetical protein sig. 98 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_216 Sigma factor PvdS, controling pyoverdin biosynthesis insig. 97 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2293 Sigma factor PvdS, controling pyoverdin biosynthesis insig. 97 99
o Pseudomonas sp. DMC3 GFF4554 hypothetical protein cofit 97 97
o Pseudomonas fluorescens SBW25 PFLU_RS21525 RNA polymerase factor sigma-70 insig. 93 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS21525 RNA polymerase factor sigma-70 sig. 93 100
o Pseudomonas simiae WCS417 PS417_19555 RNA polymerase sigma70 strong 93 100
o Pseudomonas fluorescens FW300-N2E3 AO353_19345 RNA polymerase subunit sigma-70 insig. 93 100
o Pseudomonas aeruginosa PA14 IKLFDK_11920 pyoverdine signaling pathway sigma factor PvdS insig. 95 97
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04111 hypothetical protein cofit 93 100
o Pseudomonas sp. SVBP6 COO64_RS18740 RNA polymerase factor sigma-70 cofit 92 96
o Pseudomonas syringae pv. syringae B728a Psyr_1943 Sigma-70 region 2 strong 88 97
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1943 Sigma-70 region 2 sig. 88 97
o Pseudomonas sp. BP01 JOY50_RS00025 RNA polymerase factor sigma-70 insig. 86 95
o Pseudomonas putida KT2440 PP_4244 alternative sigma factor sig. 85 95
o Azospirillum brasilense Sp245 AZOBR_RS23325 RNA polymerase sigma70 insig. 58 91
o Azospirillum sp. SherDot2 MPMX19_03247 putative RNA polymerase sigma factor FecI insig. 58 91
o Herbaspirillum seropedicae SmR1 HSERO_RS11705 extracytoplasmic-function sigma-70 factor insig. 49 93
  Burkholderia phytofirmans PsJN BPHYT_RS20215 RNA polymerase sigma 70 sig. 41 99
  Pseudomonas sp. S08-1 OH686_01025 hypothetical protein insig. 44 91
  Paraburkholderia sabiae LMG 24235 QEN71_RS15840 RNA polymerase factor sigma-70 sig. 40 99
o Rhodospirillum rubrum S1H Rru_A0883 Sigma-24 (FecI) (NCBI) insig. 36 96
  Rhodospirillum rubrum S1H Rru_A2397 Sigma-24 (FecI) (NCBI) insig. 38 90
o Variovorax sp. SCN45 GFF1645 Sigma factor PvdS, controling pyoverdin biosynthesis insig. 37 92
o Sphingobium sp. HT1-2 GFF5333 sigma factor cofit 36 91
  Azospirillum sp. SherDot2 MPMX19_03088 putative RNA polymerase sigma factor FecI insig. 36 85
  Pseudomonas stutzeri RCH2 Psest_4339 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog strong 34 84
  Pseudomonas sp. BP01 JOY50_RS01650 sigma-70 family RNA polymerase sigma factor insig. 34 88
o Sinorhizobium meliloti 1021 SMc04203 RNA polymerase sigma factor FECI protein insig. 33 91
  Azospirillum brasilense Sp245 AZOBR_RS27315 RNA polymerase sigma 70 insig. 35 85
  Pseudomonas aeruginosa PA14 IKLFDK_23065 RNA polymerase sigma factor insig. 36 91
  Pseudomonas aeruginosa PA14 IKLFDK_06170 RNA polymerase subunit sigma insig. 32 93
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3357 RNA polymerase sigma-70 factor, ECF subfamily insig. 36 79
  Pseudomonas simiae WCS417 PS417_15890 RNA polymerase sigma factor sig. 36 81
  Pseudomonas putida KT2440 PP_0352 RNA polymerase sigma-70 factor, ECF subfamily sig. 35 91
o Variovorax sp. OAS795 ABID97_RS21515 sigma-70 family RNA polymerase sigma factor no data 35 82
  Pseudomonas sp. BP01 JOY50_RS17880 RNA polymerase sigma factor insig. 35 91
  Pseudomonas fluorescens SBW25 PFLU_RS17705 sigma-70 family RNA polymerase sigma factor insig. 36 79
  Pseudomonas fluorescens SBW25-INTG PFLU_RS17705 sigma-70 family RNA polymerase sigma factor sig. 36 79
  Sphingobium sp. HT1-2 GFF2715 sigma factor insig. 35 90
o Agrobacterium fabrum C58 Atu3387 sigma factor insig. 34 90
  Pseudomonas fluorescens SBW25 PFLU_RS05190 RNA polymerase sigma factor insig. 32 92
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05190 RNA polymerase sigma factor insig. 32 92
  Pseudomonas sp. SVBP6 COO64_RS11395 RNA polymerase sigma factor insig. 32 87
  Rhodospirillum rubrum S1H Rru_A1438 Sigma-24 (FecI) (NCBI) cofit 37 85
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4951 FIG006045: Sigma factor, ECF subfamily insig. 34 87
  Pseudomonas simiae WCS417 PS417_05120 RNA polymerase subunit sigma-24 insig. 32 92
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01536 hypothetical protein insig. 32 84
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01230 putative RNA polymerase sigma factor FecI cofit 32 92
  Pseudomonas sp. SVBP6 COO64_RS22780 RNA polymerase sigma factor insig. 34 91
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4581 RNA polymerase sigma-70 factor, ECF subfamily no data 35 79
  Pseudomonas stutzeri RCH2 Psest_0650 RNA polymerase sigma factor, sigma-70 family insig. 36 87
  Pseudomonas sp. DMC3 GFF2767 putative RNA polymerase sigma factor FecI insig. 34 88
  Pseudomonas sp. RS175 PFR28_04114 putative RNA polymerase sigma factor FecI insig. 33 91
  Pseudomonas putida KT2440 PP_0704 RNA polymerase sigma-70 factor, ECF subfamily strong 35 85
  Pseudomonas simiae WCS417 PS417_26065 RNA polymerase sigma factor insig. 33 91
  Pseudomonas putida KT2440 PP_0667 RNA polymerase sigma-70 factor, ECF subfamily insig. 31 84
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05333 putative RNA polymerase sigma factor FecI insig. 33 91
  Pseudomonas segetis P6 MPMX49_02232 putative RNA polymerase sigma factor FecI insig. 32 82
  Pseudomonas sp. DMC3 GFF1893 putative RNA polymerase sigma factor FecI insig. 31 92
  Pseudomonas fluorescens FW300-N2E3 AO353_04915 RNA polymerase subunit sigma-24 insig. 32 87
  Azospirillum sp. SherDot2 MPMX19_03082 ECF RNA polymerase sigma factor SigE insig. 30 91
  Pseudomonas fluorescens SBW25 PFLU_RS27705 RNA polymerase sigma factor insig. 33 91
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27705 RNA polymerase sigma factor insig. 33 91
  Pseudomonas syringae pv. syringae B728a Psyr_4731 Sigma-70 region 2:Sigma-70 region 4 insig. 32 91
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4731 Sigma-70 region 2:Sigma-70 region 4 insig. 32 91
  Pseudomonas sp. SVBP6 COO64_RS03795 RNA polymerase sigma factor insig. 28 96
  Xanthobacter sp. DMC5 GFF2135 putative RNA polymerase sigma factor FecI insig. 35 80
  Cupriavidus basilensis FW507-4G11 RR42_RS31145 RNA polymerase sigma factor insig. 33 88
  Pseudomonas sp. BP01 JOY50_RS22945 sigma-70 family RNA polymerase sigma factor insig. 32 84
  Pseudomonas sp. RS175 PFR28_00037 putative RNA polymerase sigma factor FecI insig. 36 87
  Pseudomonas sp. BP01 JOY50_RS15495 RNA polymerase sigma factor insig. 31 91
  Agrobacterium fabrum C58 Atu3692 sigma factor sig. 29 84
  Pseudomonas simiae WCS417 PS417_16255 RNA polymerase sigma factor sig. 34 82
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02135 putative RNA polymerase sigma factor FecI cofit 34 88
  Pseudomonas fluorescens SBW25 PFLU_RS19420 sigma-70 family RNA polymerase sigma factor insig. 35 83
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19420 sigma-70 family RNA polymerase sigma factor strong 35 83
  Pectobacterium carotovorum WPP14 HER17_RS18100 sigma-70 family RNA polymerase sigma factor cofit 31 79
  Azospirillum brasilense Sp245 AZOBR_RS29160 putative RNA polymerase sigma-70 factor ECF subfamily insig. 31 91
  Pseudomonas fluorescens SBW25 PFLU_RS18285 sigma-70 family RNA polymerase sigma factor insig. 36 82
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18285 sigma-70 family RNA polymerase sigma factor insig. 36 82
  Pseudomonas fluorescens FW300-N2C3 AO356_07625 RNA polymerase subunit sigma insig. 35 87
  Pseudomonas sp. BP01 JOY50_RS12755 sigma-70 family RNA polymerase sigma factor insig. 32 91
  Pseudomonas simiae WCS417 PS417_09655 RNA polymerase sigma factor insig. 34 88
  Xanthobacter sp. DMC5 GFF2704 putative RNA polymerase sigma factor FecI insig. 33 85
  Dechlorosoma suillum PS Dsui_2948 RNA polymerase sigma factor, sigma-70 family insig. 31 84
  Pseudomonas fluorescens FW300-N2C3 AO356_22495 RNA polymerase subunit sigma-24 insig. 31 89
  Pseudomonas simiae WCS417 PS417_17630 RNA polymerase sigma factor insig. 34 83
  Pseudomonas sp. SVBP6 COO64_RS12800 RNA polymerase sigma factor insig. 31 92
  Pseudomonas simiae WCS417 PS417_00670 RNA polymerase sigma factor sig. 34 87
  Pseudomonas segetis P6 MPMX49_03224 putative RNA polymerase sigma factor FecI insig. 34 82
  Pseudomonas sp. SVBP6 COO64_RS10870 sigma-70 family RNA polymerase sigma factor insig. 31 82
  Klebsiella pneumoniae MKP103 KDGMDA_00205 RNA polymerase sigma factor FecI insig. 33 79
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2474 RNA polymerase sigma-70 factor, ECF subfamily insig. 32 91
  Pseudomonas putida KT2440 PP_4608 RNA polymerase sigma-70 factor, ECF subfamily insig. 30 91
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_398 FIG006045: Sigma factor, ECF subfamily insig. 31 89
  Azospirillum brasilense Sp245 AZOBR_RS26615 RNA polymerase insig. 29 93
  Pseudomonas sp. RS175 PFR28_02867 putative RNA polymerase sigma factor FecI insig. 33 90